contig_metadata
9 rows where analysis = "blastn", bioproject = "PRJNA508758" and tax_clade = "Sar"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1110709 | 1110709 | PRJNA508758_P_NODE_9521_length_703_cov_19.922222_g8570_i0 | PRJNA508758 | 9521 | 703 | 19.922222 | 140.05322066 | Eukaryota | 2759 | SAR_Eukaryotes | SAR_Eukaryotes | 239 | 5.02e-58 | NTclustered | gi|2795048880|ref|XM_067943659.1| | 4785 | g8570 | i0 | 77.694 | 6.425320056899 | 399 | 84 | 56 | 4 | 251 | 645 | 42 | 439 | Phytophthora cinnamomi Calmodulin (IUM83_18649), partial mRNA | blastn | 4517 | 239 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora cinnamomi | ||
| 3661888 | 3661888 | PRJNA508758_P_NODE_32303_length_359_cov_1.615385_g31255_i0 | PRJNA508758 | 32303 | 359 | 1.615385 | 5.79923215 | Synurales | 420622 | SAR_Eukaryotes | SAR_Eukaryotes | 200 | 1.15e-46 | NTclustered | gi|407079770|gb|JQ281513.1| | 2989 | g31255 | i0 | 91.667 | 40.116991643454 | 144 | 12 | 40 | 0 | 216 | 359 | 702 | 845 | Mallomonas papillosa strain CCMP476 28S ribosomal RNA gene, partial sequence | blastn | 14402 | 200 | 1 | Eukaryota | Sar | Synurophyceae | Synurales | Mallomonadaceae | Mallomonas | Mallomonas papillosa | |||
| 10039132 | 10039132 | PRJNA508758_P_NODE_18408_length_470_cov_1.551637_g17361_i0 | PRJNA508758 | 18408 | 470 | 1.551637 | 7.2926939 | Dinophyceae | 2864 | SAR_Eukaryotes | SAR_Eukaryotes | 124 | 9.549999999999999e-24 | NTclustered | gi|398372891|gb|JX402086.1| | 39449 | g17361 | i0 | 86.207 | 12.2127659574468 | 116 | 15 | 25 | 1 | 279 | 394 | 5216 | 5330 | Prorocentrum minimum strain D-127 intergenic spacer, 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, 28S ribosomal RNA gene, and intergenic spacer, complete sequence | blastn | 5740 | 124 | 1 | Eukaryota | Sar | Dinophyceae | Prorocentrales | Prorocentraceae | Prorocentrum | Prorocentrum minimum | |||
| 12589577 | 12589577 | PRJNA508758_P_NODE_14410_length_541_cov_2.284188_g13388_i0 | PRJNA508758 | 14410 | 541 | 2.284188 | 12.35745708 | root | 1 | Root_unresolved | Root_unresolved | 54.7 | 0.015 | NTclustered | gi|921121930|ref|XM_013580129.1| | 51315 | g13388 | i0 | 100 | 0.171903881700555 | 29 | 0 | 5 | 0 | 171 | 199 | 1608 | 1636 | Eimeria necatrix hypothetical protein, conserved partial mRNA | blastn | 93 | 54.7 | 1 | Eukaryota | Sar | Apicomplexa | Conoidasida | Eucoccidiorida | Eimeriidae | Eimeria | Eimeria necatrix | ||
| 13238778 | 13238778 | PRJNA508758_P_NODE_7411_length_843_cov_5.594805_g6548_i0 | PRJNA508758 | 7411 | 843 | 5.594805 | 47.16420615 | Plasmodium falciparum | 5833 | SAR_Eukaryotes | SAR_Eukaryotes | 54.7 | 0.024 | NTclustered | gi|124506116|ref|XM_001351620.1| | 36329 | g6548 | i0 | 100 | 0.0344009489916963 | 29 | 0 | 3 | 0 | 297 | 325 | 3114 | 3142 | Plasmodium falciparum 3D7 phosphatidylinositol 4-kinase (PF3D7_0509800), partial mRNA | blastn | 29 | 54.7 | 1 | Eukaryota | Sar | Apicomplexa | Aconoidasida | Haemosporida | Plasmodiidae | Plasmodium | Plasmodium falciparum | ||
| 23436811 | 23436811 | PRJNA508758_P_NODE_16119_length_507_cov_1.698157_g15074_i0 | PRJNA508758 | 16119 | 507 | 1.698157 | 8.60965599 | Eimeria necatrix | 51315 | SAR_Eukaryotes | SAR_Eukaryotes | 52.8 | 0.05 | NTclustered | gi|921132605|ref|XM_013585384.1| | 51315 | g15074 | i0 | 100 | 0.0552268244575937 | 28 | 0 | 6 | 0 | 420 | 447 | 655 | 628 | Eimeria necatrix hypothetical protein, conserved partial mRNA | blastn | 28 | 52.8 | 1 | Eukaryota | Sar | Apicomplexa | Conoidasida | Eucoccidiorida | Eimeriidae | Eimeria | Eimeria necatrix | ||
| 23436858 | 23436858 | PRJNA508758_P_NODE_19659_length_454_cov_2.293963_g18612_i0 | PRJNA508758 | 19659 | 454 | 2.293963 | 10.41459202 | Cryptosporidium ubiquitum | 857276 | SAR_Eukaryotes | SAR_Eukaryotes | 52.8 | 0.044 | NTclustered | gi|1624735482|ref|XM_029020510.1| | 857276 | g18612 | i0 | 100 | 0.0616740088105727 | 28 | 0 | 6 | 0 | 24 | 51 | 4444 | 4417 | Cryptosporidium ubiquitum chromatinic protein (cubi_03497), partial mRNA | blastn | 28 | 52.8 | 1 | Eukaryota | Sar | Apicomplexa | Conoidasida | Eucoccidiorida | Cryptosporidiidae | Cryptosporidium | Cryptosporidium ubiquitum | ||
| 23437021 | 23437021 | PRJNA508758_P_NODE_38799_length_333_cov_1.769231_g37751_i0 | PRJNA508758 | 38799 | 333 | 1.769231 | 5.89153923 | Albugo laibachii | 653948 | SAR_Eukaryotes | SAR_Eukaryotes | 58.4 | 6.74e-4 | NTclustered | gi|325194640|emb|FR825452.1| | 890382 | g37751 | i0 | 100 | 0.0930930930930931 | 31 | 0 | 9 | 0 | 96 | 126 | 304 | 274 | Albugo laibachii Nc14, genomic contig CONTIG_2296_NC14_v4_898_20 | blastn | 31 | 58.4 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Albuginales | Albuginaceae | Albugo | Albugo laibachii | ||
| 25337088 | 25337088 | PRJNA508758_P_NODE_57940_length_282_cov_1.416268_g56892_i0 | PRJNA508758 | 57940 | 282 | 1.416268 | 3.99387576 | Eukaryota | 2759 | SAR_Eukaryotes | SAR_Eukaryotes | 100 | 9.16e-17 | NTclustered | gi|1843572816|ref|XM_034566237.1| | 5823 | g56892 | i0 | 92.754 | 23.7234042553191 | 69 | 5 | 24 | 0 | 214 | 282 | 425 | 357 | Plasmodium berghei ANKA histone H2A.Z, putative (PBANKA_1217600), partial mRNA | blastn | 6690 | 100 | 1 | Eukaryota | Sar | Apicomplexa | Aconoidasida | Haemosporida | Plasmodiidae | Plasmodium | Plasmodium berghei |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;