RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA506002" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 8 ✖

tax_clade 1

bioproject 1

  • PRJNA506002 · 8 ✖

analysis 1

  • blastn · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1759086 1759086 PRJNA506002_S_NODE_34942_length_294_cov_1.669683_g34696_i0 PRJNA506002 34942 294 1.669683 4.90886802 Caudoviricetes sp. 2832643 Viruses Viruses 516 8.05e-142   NTclustered gi|2059696309|tpg|BK029525.1| 2832643 g34696 i0 98.299 6.09523809523809 294 5 100 0 1 294 32490 32783 MAG TPA_asm: Caudoviricetes sp. isolate ctjAr5, partial genome blastn 1792 516 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
4310966 4310966 PRJNA506002_S_NODE_48944_length_263_cov_2.015789_g48698_i0 PRJNA506002 48944 263 2.015789 5.30152507 Caudoviricetes sp. 2832643 Viruses Viruses 52.8 0.024   NTclustered gi|2054449737|tpg|BK031291.1| 2832643 g48698 i0 100 0.106463878326996 28 0 11 0 25 52 120252 120225 MAG TPA_asm: Caudoviricetes sp. isolate ct3F98, partial genome blastn 28 52.8 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
10687676 10687676 PRJNA506002_S_NODE_34369_length_296_cov_1.035874_g34123_i0 PRJNA506002 34369 296 1.035874 3.06618704 Streptococcus phage Javan202 2548045 Viruses Viruses 313 1.14e-80   NTclustered gi|1608079841|gb|MK448873.1| 2548045 g34123 i0 92.991 0.722972972972973 214 15 72 0 83 296 18597 18810 Streptococcus phage Javan202, complete genome blastn 214 313 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Streptococcus phage Javan202
14512772 14512772 PRJNA506002_S_NODE_27792_length_315_cov_1.268595_g27546_i0 PRJNA506002 27792 315 1.268595 3.99607425 Bacteriophage sp. 38018 Viruses Viruses 366 9.27e-97   NTclustered gi|2052234324|tpg|BK056786.1| 38018 g27546 i0 87.619 5 315 39 100 0 1 315 59923 59609 MAG TPA_asm: Bacteriophage sp. isolate ctb0J3, partial genome blastn 1575 366 1 Viruses               Bacteriophage sp.
14512985 14512985 PRJNA506002_S_NODE_51252_length_259_cov_1.295699_g51006_i0 PRJNA506002 51252 259 1.295699 3.35586041 Betatorquevirus homini2 3048400 Viruses Viruses 381 2.6499999999999995e-101   NTclustered gi|2872905738|gb|PQ581002.1| 3048400 g51006 i0 93.385 17.5135135135135 257 17 99 0 3 259 2283 2539 MAG: Betatorquevirus homini2 isolate DZY13_k141_19017 genomic sequence blastn 4536 381 1 Viruses   Shotokuvirae Commensaviricota Cardeaviricetes Sanitavirales Anelloviridae Betatorquevirus Betatorquevirus homini2
15786828 15786828 PRJNA506002_S_NODE_61213_length_246_cov_0.890173_g60967_i0 PRJNA506002 61213 246 0.890173 2.18982558 Pithovirus LCDPAC02 2506601 Viruses Viruses 56.5 0.002   NTclustered gi|1588058287|gb|MK500301.1| 2506601 g60967 i0 94.595 0.150406504065041 37 1 15 1 73 108 55583 55547 MAG: Pithovirus LCDPAC02 genomic sequence blastn 37 56.5 1 Viruses Pithoviruses             Pithovirus LCDPAC02
21512498 21512498 PRJNA506002_S_NODE_40157_length_282_cov_1.014354_g39911_i0 PRJNA506002 40157 282 1.014354 2.86047828 Mimiviridae 549779 Viruses Viruses 52.8 0.026   NTclustered gi|363539767|ref|NC_016072.1| 1094892 g39911 i0 100 1.09219858156028 28 0 10 0 80 107 161445 161418 Megavirus chiliensis, complete genome blastn 308 52.8 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Megavirus Megavirus chilense
25336956 25336956 PRJNA506002_S_NODE_51360_length_259_cov_1.236559_g51114_i0 PRJNA506002 51360 259 1.236559 3.20268781 Tetraparvovirus 1511911 Viruses Viruses 473 4.25e-129   NTclustered gi|2277478573|gb|MZ502236.1| 1096141 g51114 i0 99.614 18 259 1 100 0 1 259 5050 4792 Bovine hokovirus 2 isolate BCS1/USA nonstructural protein, minor structural protein, and major structural protein genes, complete cds blastn 4662 473 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae Tetraparvovirus Tetraparvovirus ungulate1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;