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contig_metadata

10 rows where analysis = "blastn", bioproject = "PRJNA506002" and tax_phylum = "Euglenozoa"

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tax_superkingdom 1

tax_phylum 1

  • Euglenozoa · 10 ✖

tax_clade 1

bioproject 1

  • PRJNA506002 · 10 ✖

analysis 1

  • blastn · 10 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4310808 4310808 PRJNA506002_S_NODE_30884_length_305_cov_3.271552_g30638_i0 PRJNA506002 30884 305 3.271552 9.9782336 Trypanosoma conorhini 83891 Euglenozoa other_Eukaryota 209 1.59e-49   NTclustered gi|1673142225|ref|XM_029373915.1| 83891 g30638 i0 85.5 0.655737704918033 200 29 66 0 104 303 1532 1333 Trypanosoma conorhini ATPase beta subunit (Tco025E_07048), partial mRNA blastn 200 209 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma conorhini
6861781 6861781 PRJNA506002_S_NODE_40826_length_280_cov_1.864734_g40580_i0 PRJNA506002 40826 280 1.864734 5.2212552 Trypanosoma conorhini 83891 Euglenozoa other_Eukaryota 76.8 1.53e-9   NTclustered gi|1673142105|ref|XM_029373822.1| 83891 g40580 i0 92.453 0.746428571428571 53 4 19 0 228 280 60 112 Trypanosoma conorhini uncharacterized protein (Tco025E_06955), partial mRNA blastn 209 76.8 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma conorhini
13237614 13237614 PRJNA506002_S_NODE_10871_length_401_cov_7.399390_g10625_i0 PRJNA506002 10871 401 7.39939 29.6715539 Trypanosoma theileri 67003 Euglenozoa other_Eukaryota 538 2.4199999999999995e-148   NTclustered gi|2026667530|dbj|LC618030.1| 67003 g10625 i0 90.754 143.01246882793 411 27 100 9 1 401 4781 4372 Trypanosoma theileri YMG-11 genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA, ITS3, ITS4, ITS5, partial and complete sequence blastn 57348 538 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma theileri
13238077 13238077 PRJNA506002_S_NODE_61311_length_246_cov_0.890173_g61065_i0 PRJNA506002 61311 246 0.890173 2.18982558 Trypanosoma grayi 71804 Euglenozoa other_Eukaryota 156 1.65e-33   NTclustered gi|686640686|ref|XM_009314514.1| 71804 g61065 i0 83.333 6.39837398373984 168 28 68 0 2 169 478 645 Trypanosoma grayi 60S ribosomal protein L10a partial mRNA blastn 1574 156 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma grayi
15786676 15786676 PRJNA506002_S_NODE_42633_length_276_cov_2.197044_g42387_i0 PRJNA506002 42633 276 2.197044 6.06384144 Leptomonas pyrrhocoris 157538 Euglenozoa other_Eukaryota 195 3.98e-45   NTclustered gi|1002453653|ref|XM_015799444.1| 157538 g42387 i0 80.784 11.8152173913043 255 43 91 4 25 276 805 554 Leptomonas pyrrhocoris 40S ribosomal protein S2 mRNA blastn 3261 195 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leptomonas Leptomonas pyrrhocoris
15786725 15786725 PRJNA506002_S_NODE_47333_length_266_cov_2.595855_g47087_i0 PRJNA506002 47333 266 2.595855 6.9049743 Leptomonas pyrrhocoris 157538 Euglenozoa other_Eukaryota 303 6.08e-78   NTclustered gi|1002460865|ref|XM_015796485.1| 157538 g47087 i0 90.171 70.6353383458647 234 21 88 2 34 266 795 563 Leptomonas pyrrhocoris putative 60S ribosomal protein L2 putative60S ribosomal protein L8 mRNA blastn 18789 303 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leptomonas Leptomonas pyrrhocoris
18335406 18335406 PRJNA506002_S_NODE_11395_length_397_cov_3.234568_g11149_i0 PRJNA506002 11395 397 3.234568 12.84123496 Neobodo designis 312471 Euglenozoa other_Eukaryota 719 0   NTclustered gi|33317834|gb|AF464896.1| 312471 g11149 i0 99.494 98.0201511335013 395 2 99 0 1 395 1669 2063 Bodo designis strain DH 18S small subunit ribosomal RNA gene, partial sequence blastn 38914 719 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Neobodo Neobodo designis
18335622 18335622 PRJNA506002_S_NODE_36455_length_290_cov_2.336406_g36209_i0 PRJNA506002 36455 290 2.336406 6.7755774 Crithidia fasciculata 5656 Euglenozoa other_Eukaryota 128 4.34e-25   NTclustered gi|343622|gb|M95682.1|TRFMTOFEAT 5656 g36209 i0 88.571 1.82413793103448 105 12 36 0 186 290 1898 1794 Crithidia fasciculata mitochondrial heat shock protein mRNA sequence blastn 529 128 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Crithidia Crithidia fasciculata
19609980 19609980 PRJNA506002_S_NODE_44636_length_272_cov_1.296482_g44390_i0 PRJNA506002 44636 272 1.296482 3.52643104 Leptomonas pyrrhocoris 157538 Euglenozoa other_Eukaryota 195 3.92e-45   NTclustered gi|1002447734|ref|XM_015802890.1| 157538 g44390 i0 81.893 30.8051470588235 243 32 87 9 37 272 463 226 Leptomonas pyrrhocoris putative 40S ribosomal protein S18 mRNA blastn 8379 195 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leptomonas Leptomonas pyrrhocoris
24709693 24709693 PRJNA506002_S_NODE_15120_length_371_cov_1.731544_g14874_i0 PRJNA506002 15120 371 1.731544 6.42402824 Leishmania mexicana 5665 Euglenozoa other_Eukaryota 156 2.61e-33   NTclustered gi|401419743|ref|XM_003874312.1| 929439 g14874 i0 81.221 4.75471698113208 213 23 55 12 161 363 2538 2333 Leishmania mexicana MHOM/GT/2001/U1103 elongation factor 2 partial mRNA blastn 1764 156 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania mexicana

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;