RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA506002" and tax_kingdom = "Shotokuvirae"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Shotokuvirae · 2 ✖

bioproject 1

  • PRJNA506002 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14512985 14512985 PRJNA506002_S_NODE_51252_length_259_cov_1.295699_g51006_i0 PRJNA506002 51252 259 1.295699 3.35586041 Betatorquevirus homini2 3048400 Viruses Viruses 381 2.6499999999999995e-101   NTclustered gi|2872905738|gb|PQ581002.1| 3048400 g51006 i0 93.385 17.5135135135135 257 17 99 0 3 259 2283 2539 MAG: Betatorquevirus homini2 isolate DZY13_k141_19017 genomic sequence blastn 4536 381 1 Viruses   Shotokuvirae Commensaviricota Cardeaviricetes Sanitavirales Anelloviridae Betatorquevirus Betatorquevirus homini2
25336956 25336956 PRJNA506002_S_NODE_51360_length_259_cov_1.236559_g51114_i0 PRJNA506002 51360 259 1.236559 3.20268781 Tetraparvovirus 1511911 Viruses Viruses 473 4.25e-129   NTclustered gi|2277478573|gb|MZ502236.1| 1096141 g51114 i0 99.614 18 259 1 100 0 1 259 5050 4792 Bovine hokovirus 2 isolate BCS1/USA nonstructural protein, minor structural protein, and major structural protein genes, complete cds blastn 4662 473 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae Tetraparvovirus Tetraparvovirus ungulate1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;