RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA505837" and tax_phylum = "Pisuviricota"

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tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA505837 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1758805 1758805 PRJNA505837_S_NODE_2_length_3832_cov_11.597686_g1_i0 PRJNA505837 2 3832 11.597686 444.42332752 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 2507 0   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g1 i0 92.04 0.78731732776618 1784 136 79 5 4 1785 7108 5329 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 3017 2507 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
1758809 1758809 PRJNA505837_S_NODE_382_length_235_cov_2.669903_g367_i0 PRJNA505837 382 235 2.669903 6.27427205 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 207 4.25e-49   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g367 i0 98.305 0.502127659574468 118 2 50 0 1 118 2217 2100 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 118 207 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
10687434 10687434 PRJNA505837_S_NODE_149_length_357_cov_3.408537_g134_i0 PRJNA505837 149 357 3.408537 12.16847709 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 320 8.39e-83   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g134 i0 95.939 0.551820728291317 197 8 55 0 160 356 2543 2347 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 197 320 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
23436137 23436137 PRJNA505837_S_NODE_779_length_168_cov_2.525180_g764_i0 PRJNA505837 779 168 2.52518 4.2423024 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 244 2.1699999999999999e-60   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g764 i0 93.333 0.982142857142857 165 11 98 0 1 165 1544 1708 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 165 244 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;