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contig_metadata

9 rows where analysis = "blastn", bioproject = "PRJNA505329" and tax_superkingdom = "Archaea"

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tax_kingdom 2

tax_superkingdom 1

  • Archaea · 9 ✖

bioproject 1

  • PRJNA505329 · 9 ✖

analysis 1

  • blastn · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4938526 4938526 PRJNA505329_P_NODE_25044_length_194_cov_3.082759_g24573_i0 PRJNA505329 25044 194 3.082759 5.98055246 Natrialbaceae 1644061 Archaea Archaea 202 1.5699999999999998e-47   NTclustered gi|1621086513|gb|CP031303.1| 121872 g24573 i0 85.784 58.1134020618557 204 14 97 1 4 192 751860 751657 Natrinema thermotolerans strain A29 chromosome, complete genome blastn 11274 202 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Natrinema Natrinema thermotolerans
5587299 5587299 PRJNA505329_P_NODE_47165_length_164_cov_2.452174_g46694_i0 PRJNA505329 47165 164 2.452174 4.02156536 Halanaeroarchaeum sulfurireducens 1604004 Archaea Archaea 257 2.7e-64   NTclustered gi|822662803|gb|CP008875.1| 1604004 g46694 i0 95.092 6.97560975609756 163 8 99 0 2 164 108518 108356 Halanaeroarchaeum sulfurireducens strain HSR2 plasmid pHSR2-01, complete sequence blastn 1144 257 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halobacteriaceae Halanaeroarchaeum Halanaeroarchaeum sulfurireducens
16412874 16412874 PRJNA505329_P_NODE_12073_length_233_cov_3.266304_g11602_i0 PRJNA505329 12073 233 3.266304 7.61048832 Methanosarcina 2207 Archaea Archaea 187 5.48e-43   NTclustered gi|470477259|ref|NR_076372.1| 2208 g11602 i0 100 178.896995708155 101 0 85 0 133 233 2254 2354 Methanosarcina barkeri strain Fusaro 23S ribosomal RNA gene, complete sequence blastn 41683 187 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina barkeri
18335027 18335027 PRJNA505329_P_NODE_30675_length_186_cov_2.233577_g30204_i0 PRJNA505329 30675 186 2.233577 4.15445322 Halobacterium sp. BOL4-2 2810537 Archaea Archaea 261 2.43e-65   NTclustered gi|1992393335|gb|CP070334.1| 2810537 g30204 i0 94.152 10.0591397849462 171 10 92 0 11 181 71573 71743 Halobacterium sp. BOL4-2 plasmid pBOL4-2_105.9, complete sequence blastn 1871 261 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halobacteriaceae Halobacterium Halobacterium sp. BOL4-2
18335192 18335192 PRJNA505329_P_NODE_43015_length_168_cov_1.722689_g42544_i0 PRJNA505329 43015 168 1.722689 2.89411752 Methanomassiliicoccaceae archaeon DOK 1535962 Archaea Archaea 278 2.14e-70   NTclustered gi|1799215713|gb|CP047880.1| 1535962 g42544 i0 96.97 18.1547619047619 165 5 98 0 4 168 1504145 1503981 Methanomassiliicoccaceae archaeon DOK chromosome, complete genome blastn 3050 278 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales Methanomassiliicoccaceae   Methanomassiliicoccaceae archaeon DOK
22787417 22787417 PRJNA505329_P_NODE_40638_length_171_cov_1.680328_g40167_i0 PRJNA505329 40638 171 1.680328 2.87336088 Pyrobaculum 2276 Archaea Archaea 311 2.14e-80   NTclustered gi|294441|gb|L07511.1|PYBRGDY 2277 g40167 i0 100 98.2456140350877 168 0 98 0 4 171 894 1061 Pyrobaculum islandicum 16S ribosomal RNA gene blastn 16800 311 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Thermoproteales Thermoproteaceae Pyrobaculum Pyrobaculum islandicum
22787426 22787426 PRJNA505329_P_NODE_42138_length_169_cov_0.866667_g41667_i0 PRJNA505329 42138 169 0.866667 1.46466723 Methanobrevibacter 2172 Archaea Archaea 226 7.859999999999997e-55   NTclustered gi|2791693311|gb|CP144200.1| 2173 g41667 i0 93.464 110.171597633136 153 9 91 1 1 153 1284970 1284819 Methanobrevibacter smithii strain GRAZ-2 chromosome, complete genome blastn 18619 226 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter smithii
23435724 23435724 PRJNA505329_P_NODE_23859_length_197_cov_3.925676_g23388_i0 PRJNA505329 23859 197 3.925676 7.73358172 Candidatus Nitrosocosmicus oleophilus 1353260 Archaea Archaea 180 7.499999999999998e-41   NTclustered gi|937513727|gb|CP012850.1| 1353260 g23388 i0 99 14.2842639593909 100 1 98 0 97 196 849303 849402 Candidatus Nitrosocosmicus oleophilus strain MY3, complete genome blastn 2814 180 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus oleophilus
24709486 24709486 PRJNA505329_P_NODE_44460_length_167_cov_0.881356_g43989_i0 PRJNA505329 44460 167 0.881356 1.47186452 Candidatus Nitrosotenuis cloacae 1603555 Archaea Archaea 270 3.5499999999999993e-68   NTclustered gi|808354332|gb|CP011097.2| 1603555 g43989 i0 96.341 0.982035928143713 164 6 98 0 1 164 1356880 1357043 Candidatus Nitrosotenuis cloacae strain SAT1, complete genome blastn 164 270 1 Archaea   Thermoproteati Nitrososphaerota       Candidatus Nitrosotenuis Candidatus Nitrosotenuis cloacae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;