RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA505329" and tax_phylum = "Evosea"

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tax_superkingdom 1

tax_phylum 1

  • Evosea · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA505329 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8763304 8763304 PRJNA505329_P_NODE_28127_length_190_cov_1.460993_g27656_i0 PRJNA505329 28127 190 1.460993 2.7758867 Physaraceae 1115744 Evosea other_Eukaryota 316 5.24e-82   NTclustered gi|512391241|gb|KC759091.1| 1346252 g27656 i0 97.826 93.7894736842105 184 2 96 2 9 190 184 367 Badhamia melanospora strain FRA28952MM small subunit ribosomal RNA gene, partial sequence blastn 17820 316 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Badhamia Badhamia melanospora
12589366 12589366 PRJNA505329_P_NODE_49250_length_162_cov_3.212389_g48779_i0 PRJNA505329 49250 162 3.212389 5.20407018 Physariida 5789 Evosea other_Eukaryota 292 7.3e-75   NTclustered gi|2270227767|gb|ON973803.1| 159720 g48779 i0 100 33.4135802469136 158 0 98 0 4 161 123 280 Fuligo septica isolate NJ2-2 small subunit ribosomal RNA gene, partial sequence blastn 5413 292 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Fuligo Fuligo septica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;