contig_metadata
18 rows where analysis = "blastn", bioproject = "PRJNA505329" and tax_phylum = "Acidobacteriota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 483284 | 483284 | PRJNA505329_P_NODE_25321_length_194_cov_2.117241_g24850_i0 | PRJNA505329 | 25321 | 194 | 2.117241 | 4.10744754 | Thermoanaerobaculia bacterium | 2651171 | Bacteria | Bacteria | 296 | 7.01e-76 | NTclustered | gi|2874253700|emb|OY969426.1| | 2651171 | g24850 | i0 | 95.652 | 460.412371134021 | 184 | 8 | 95 | 0 | 4 | 187 | 2973541 | 2973724 | MAG: Thermoanaerobaculia bacterium isolate MFD02979.bin.c.1 genome assembly, chromosome: 1 | blastn | 89320 | 296 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Thermoanaerobaculia | Thermoanaerobaculia bacterium | |||||
| 483403 | 483403 | PRJNA505329_P_NODE_36681_length_177_cov_1.609375_g36210_i0 | PRJNA505329 | 36681 | 177 | 1.609375 | 2.84859375 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 241 | 2.97e-59 | NTclustered | gi|2874254091|emb|OY970174.1| | 171953 | g36210 | i0 | 91.429 | 79.7570621468927 | 175 | 15 | 99 | 0 | 3 | 177 | 1418257 | 1418431 | MAG: uncultured Acidobacteriota bacterium isolate MFD01275.bin.c.18 genome assembly, chromosome: 1 | blastn | 14117 | 241 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 4310338 | 4310338 | PRJNA505329_P_NODE_34484_length_180_cov_2.610687_g34013_i0 | PRJNA505329 | 34484 | 180 | 2.610687 | 4.6992366 | Acidobacteriota bacterium | 1978231 | Bacteria | Bacteria | 255 | 1.08e-63 | NTclustered | gi|1958093598|gb|CP065003.1| | 1978231 | g34013 | i0 | 92.655 | 40.9611111111111 | 177 | 13 | 98 | 0 | 1 | 177 | 320873 | 320697 | Acidobacteria bacterium isolate Kalu_18-Q3-R12-55_MAXAC.185_cln chromosome, complete genome | blastn | 7373 | 255 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 8136400 | 8136400 | PRJNA505329_P_NODE_22007_length_200_cov_4.503311_g21536_i0 | PRJNA505329 | 22007 | 200 | 4.503311 | 9.006622 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 309 | 9.34e-80 | NTclustered | gi|2874253692|emb|OY969418.1| | 171953 | g21536 | i0 | 94.924 | 160.95 | 197 | 10 | 99 | 0 | 4 | 200 | 4231285 | 4231089 | MAG: uncultured Acidobacteriota bacterium isolate MFD09212.bin.c.1 genome assembly, chromosome: 1 | blastn | 32190 | 309 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 10038877 | 10038877 | PRJNA505329_P_NODE_38988_length_173_cov_2.548387_g38517_i0 | PRJNA505329 | 38988 | 173 | 2.548387 | 4.4087095100000004 | Luteitalea | 2004797 | Bacteria | Bacteria | 315 | 1.68e-81 | NTclustered | gi|1016914409|gb|CP015136.1| | 1855912 | g38517 | i0 | 100 | 91.7341040462428 | 170 | 0 | 98 | 0 | 1 | 170 | 654346 | 654177 | Luteitalea pratensis strain DSM 100886 chromosome, complete genome | blastn | 15870 | 315 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Vicinamibacteria | Vicinamibacterales | Vicinamibacteraceae | Luteitalea | Luteitalea pratensis | ||
| 13237012 | 13237012 | PRJNA505329_P_NODE_12151_length_233_cov_3.244565_g11680_i0 | PRJNA505329 | 12151 | 233 | 3.244565 | 7.55983645 | Holophagales bacterium | 2478486 | Bacteria | Bacteria | 73.1 | 1.6e-8 | NTclustered | gi|1958024485|gb|CP064972.1| | 2478486 | g11680 | i0 | 82.716 | 0.347639484978541 | 81 | 14 | 35 | 0 | 1 | 81 | 4052289 | 4052209 | Holophagales bacterium isolate EsbW_18-Q3-R4-48_BAT3C.4_cln chromosome, complete genome | blastn | 81 | 73.1 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Holophagae | Holophagales | Holophagales bacterium | ||||
| 13237130 | 13237130 | PRJNA505329_P_NODE_21991_length_200_cov_4.569536_g21520_i0 | PRJNA505329 | 21991 | 200 | 4.569536 | 9.139072 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 137 | 4.66e-28 | NTclustered | gi|2874254091|emb|OY970174.1| | 171953 | g21520 | i0 | 79.31 | 7.095 | 203 | 36 | 99 | 5 | 1 | 197 | 3362022 | 3362224 | MAG: uncultured Acidobacteriota bacterium isolate MFD01275.bin.c.18 genome assembly, chromosome: 1 | blastn | 1419 | 137 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 14512120 | 14512120 | PRJNA505329_P_NODE_15912_length_233_cov_2.532609_g15441_i0 | PRJNA505329 | 15912 | 233 | 2.532609 | 5.90097897 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 115 | 2.6200000000000003e-21 | NTclustered | gi|2874253692|emb|OY969418.1| | 171953 | g15441 | i0 | 87.879 | 0.424892703862661 | 99 | 10 | 42 | 2 | 4 | 101 | 3841375 | 3841472 | MAG: uncultured Acidobacteriota bacterium isolate MFD09212.bin.c.1 genome assembly, chromosome: 1 | blastn | 99 | 115 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 14512583 | 14512583 | PRJNA505329_P_NODE_8072_length_255_cov_4.184466_g7601_i0 | PRJNA505329 | 8072 | 255 | 4.184466 | 10.6703883 | Acidobacteriota bacterium | 1978231 | Bacteria | Bacteria | 117 | 8.1e-22 | NTclustered | gi|1958093598|gb|CP065003.1| | 1978231 | g7601 | i0 | 87.879 | 117.63137254902 | 99 | 12 | 39 | 0 | 29 | 127 | 318214 | 318312 | Acidobacteria bacterium isolate Kalu_18-Q3-R12-55_MAXAC.185_cln chromosome, complete genome | blastn | 29996 | 117 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 15786107 | 15786107 | PRJNA505329_P_NODE_33793_length_181_cov_3.090909_g33322_i0 | PRJNA505329 | 33793 | 181 | 3.090909 | 5.59454529 | Granulicella sp. WH15 | 2602070 | Bacteria | Bacteria | 148 | 1.9099999999999998e-31 | NTclustered | gi|1799576755|gb|CP042596.1| | 2602070 | g33322 | i0 | 81.921 | 0.977900552486188 | 177 | 30 | 97 | 2 | 2 | 177 | 3934686 | 3934861 | Granulicella sp. WH15 chromosome, complete genome | blastn | 177 | 148 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Terriglobales | Acidobacteriaceae | Granulicella | Granulicella sp. WH15 | ||
| 19609138 | 19609138 | PRJNA505329_P_NODE_10096_length_233_cov_4.706522_g9625_i0 | PRJNA505329 | 10096 | 233 | 4.706522 | 10.96619626 | uncultured Vicinamibacterales bacterium | 3036250 | Bacteria | Bacteria | 99 | 2.64e-16 | NTclustered | gi|2546137835|emb|OY282382.1| | 3036250 | g9625 | i0 | 86.667 | 1.75107296137339 | 90 | 10 | 38 | 2 | 6 | 94 | 5753605 | 5753693 | MAG: uncultured Vicinamibacterales bacterium isolate e65da963-7c29-4b68-91ce-224fd25ea74c genome assembly, chromosome: 1 | blastn | 408 | 99 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Vicinamibacteria | Vicinamibacterales | uncultured Vicinamibacterales bacterium | ||||
| 19609480 | 19609480 | PRJNA505329_P_NODE_38476_length_174_cov_2.320000_g38005_i0 | PRJNA505329 | 38476 | 174 | 2.32 | 4.0368 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 154 | 3.9e-33 | NTclustered | gi|2874253885|emb|OY970060.1| | 171953 | g38005 | i0 | 86.525 | 1.39080459770115 | 141 | 17 | 80 | 2 | 32 | 171 | 1617988 | 1618127 | MAG: uncultured Acidobacteriota bacterium isolate MFD01916.bin.c.4 genome assembly, chromosome: 1 | blastn | 242 | 154 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 21512157 | 21512157 | PRJNA505329_P_NODE_15157_length_233_cov_2.663043_g14686_i0 | PRJNA505329 | 15157 | 233 | 2.663043 | 6.20489019 | Bacteria | 2 | Bacteria | Bacteria | 183 | 7.089999999999998e-42 | NTclustered | gi|31789363|gb|AY281352.1| | 171953 | g14686 | i0 | 100 | 52.622317596566504 | 99 | 0 | 42 | 0 | 133 | 231 | 1559 | 1657 | Uncultured Acidobacteria bacterium clone 23k22 genomic sequence | blastn | 12261 | 183 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 21512195 | 21512195 | PRJNA505329_P_NODE_20577_length_201_cov_3.447368_g20106_i0 | PRJNA505329 | 20577 | 201 | 3.447368 | 6.92920968 | Geothrix | 44675 | Bacteria | Bacteria | 169 | 1.66e-37 | NTclustered | gi|2515262989|gb|CP126625.1| | 1962974 | g20106 | i0 | 97 | 4.39800995024876 | 100 | 3 | 99 | 0 | 3 | 102 | 3463965 | 3463866 | MAG: Geothrix sp. isolate L227-G1 chromosome, complete genome | blastn | 884 | 169 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Holophagae | Holophagales | Holophagaceae | Geothrix | Geothrix sp. | ||
| 22160075 | 22160075 | PRJNA505329_P_NODE_30678_length_186_cov_2.233577_g30207_i0 | PRJNA505329 | 30678 | 186 | 2.233577 | 4.15445322 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 176 | 9.04e-40 | NTclustered | gi|31789410|gb|AY281354.1| | 171953 | g30207 | i0 | 84.615 | 125.795698924731 | 182 | 22 | 95 | 5 | 6 | 182 | 36988 | 37168 | Uncultured Acidobacteria bacterium clone 38c7 genomic sequence | blastn | 23398 | 176 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 24709154 | 24709154 | PRJNA505329_P_NODE_17100_length_226_cov_7.152542_g16629_i0 | PRJNA505329 | 17100 | 226 | 7.152542 | 16.16474492 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 351 | 1.77e-92 | NTclustered | gi|112980873|gb|DQ829677.1| | 171953 | g16629 | i0 | 95.067 | 380.234513274336 | 223 | 11 | 99 | 0 | 4 | 226 | 1303 | 1525 | Uncultured Acidobacteria bacterium clone DON3 23S ribosomal RNA gene, partial sequence | blastn | 85933 | 351 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 24709194 | 24709194 | PRJNA505329_P_NODE_20300_length_201_cov_3.815789_g19829_i0 | PRJNA505329 | 20300 | 201 | 3.815789 | 7.66973589 | Geothrix sp. PMB-07 | 3068640 | Bacteria | Bacteria | 126 | 1.02e-24 | NTclustered | gi|2563347696|gb|CP132333.1| | 3068640 | g19829 | i0 | 89.796 | 1.27363184079602 | 98 | 10 | 50 | 0 | 103 | 200 | 3987883 | 3987786 | Geothrix sp. PMB-07 chromosome, complete genome | blastn | 256 | 126 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Holophagae | Holophagales | Holophagaceae | Geothrix | Geothrix sp. PMB-07 | ||
| 24709257 | 24709257 | PRJNA505329_P_NODE_25160_length_194_cov_2.717241_g24689_i0 | PRJNA505329 | 25160 | 194 | 2.717241 | 5.27144754 | Luteitalea sp. TBR-22 | 2802971 | Bacteria | Bacteria | 152 | 1.5999999999999998e-32 | NTclustered | gi|2131947417|dbj|AP024452.2| | 2802971 | g24689 | i0 | 82.486 | 1.83505154639175 | 177 | 28 | 90 | 3 | 4 | 177 | 5865501 | 5865677 | Vicinamibacteria bacterium TBR-22 DNA, complete genome | blastn | 356 | 152 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Vicinamibacteria | Vicinamibacterales | Vicinamibacteraceae | Luteitalea | Luteitalea sp. TBR-22 |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;