contig_metadata
11 rows where analysis = "blastn", bioproject = "PRJNA505329" and tax_kingdom = "Fusobacteriati"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 483185 | 483185 | PRJNA505329_P_NODE_17461_length_221_cov_10.604651_g16990_i0 | PRJNA505329 | 17461 | 221 | 10.604651 | 23.43627871 | Fusobacterium polymorphum | 76857 | Bacteria | Bacteria | 409 | 1.0100000000000001e-109 | NTclustered | gi|2704883040|gb|CP056004.1| | 76857 | g16990 | i0 | 100 | 496 | 221 | 0 | 100 | 0 | 1 | 221 | 2214631 | 2214411 | Fusobacterium polymorphum strain SB016 chromosome, complete genome | blastn | 109616 | 409 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium polymorphum | ||
| 1110378 | 1110378 | PRJNA505329_P_NODE_40261_length_171_cov_3.024590_g39790_i0 | PRJNA505329 | 40261 | 171 | 3.02459 | 5.1720489 | Fusobacterium | 848 | Bacteria | Bacteria | 305 | 9.96e-79 | NTclustered | gi|2704983719|gb|CP077132.1| | 851 | g39790 | i0 | 100 | 481.906432748538 | 165 | 0 | 98 | 0 | 4 | 168 | 94469 | 94305 | Fusobacterium nucleatum strain KCOM3208 chromosome, complete genome | blastn | 82406 | 305 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium nucleatum | ||
| 1110398 | 1110398 | PRJNA505329_P_NODE_44361_length_167_cov_0.881356_g43890_i0 | PRJNA505329 | 44361 | 167 | 0.881356 | 1.47186452 | Cetobacterium | 180162 | Bacteria | Bacteria | 267 | 4.599999999999999e-67 | NTclustered | gi|2666488225|gb|CP143319.1| | 188913 | g43890 | i0 | 95.758 | 4.94011976047904 | 165 | 7 | 99 | 0 | 3 | 167 | 324594 | 324758 | Cetobacterium somerae strain ceto chromosome, complete genome | blastn | 825 | 267 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium | Cetobacterium somerae | ||
| 8763190 | 8763190 | PRJNA505329_P_NODE_1187_length_1099_cov_17.292381_g724_i1 | PRJNA505329 | 1187 | 1099 | 17.292381 | 190.04326719 | Cetobacterium | 180162 | Bacteria | Bacteria | 1864 | 0 | NTclustered | gi|2865368125|gb|CP122294.1| | 188913 | g724 | i1 | 97.273 | 519.376706096451 | 1100 | 29 | 100 | 1 | 1 | 1099 | 278465 | 279564 | Cetobacterium somerae strain MSU41 plasmid p41_t2, complete sequence | blastn | 570795 | 1864 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium | Cetobacterium somerae | ||
| 9411608 | 9411608 | PRJNA505329_P_NODE_428_length_1942_cov_5.646593_g331_i0 | PRJNA505329 | 428 | 1942 | 5.646593 | 109.65683606 | Leptotrichia sp. oral taxon 212 | 712357 | Bacteria | Bacteria | 2453 | 0 | NTclustered | gi|922689899|gb|CP012410.1| | 712357 | g331 | i0 | 97.115 | 444.669412976313 | 1456 | 38 | 99 | 4 | 486 | 1939 | 1842714 | 1844167 | Leptotrichia sp. oral taxon 212 strain W10393, complete genome | blastn | 863548 | 2453 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. oral taxon 212 | ||
| 13237507 | 13237507 | PRJNA505329_P_NODE_51291_length_158_cov_2.238532_g50820_i0 | PRJNA505329 | 51291 | 158 | 2.238532 | 3.53688056 | Leptotrichia hofstadii | 157688 | Bacteria | Bacteria | 287 | 3.29e-73 | NTclustered | gi|1708566027|dbj|AP019823.1| | 157688 | g50820 | i0 | 100 | 390.088607594937 | 155 | 0 | 98 | 0 | 4 | 158 | 499705 | 499859 | Leptotrichia hofstadii JCM16775 DNA, complete genome | blastn | 61634 | 287 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia hofstadii | ||
| 14512454 | 14512454 | PRJNA505329_P_NODE_4252_length_391_cov_3.961988_g3787_i0 | PRJNA505329 | 4252 | 391 | 3.961988 | 15.49137308 | Leptotrichia hongkongensis | 554406 | Bacteria | Bacteria | 279 | 1.58e-70 | NTclustered | gi|1708587163|dbj|AP019846.1| | 554406 | g3787 | i0 | 100 | 114.590792838875 | 151 | 0 | 93 | 0 | 241 | 391 | 70589 | 70739 | Leptotrichia hongkongensis JMUB5056 DNA, complete genome | blastn | 44805 | 279 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia hongkongensis | ||
| 15786147 | 15786147 | PRJNA505329_P_NODE_38073_length_175_cov_1.626984_g37602_i0 | PRJNA505329 | 38073 | 175 | 1.626984 | 2.847222 | Leptotrichia hofstadii | 157688 | Bacteria | Bacteria | 302 | 1.33e-77 | NTclustered | gi|1708566027|dbj|AP019823.1| | 157688 | g37602 | i0 | 98.266 | 6.47428571428571 | 173 | 2 | 99 | 1 | 1 | 173 | 639554 | 639383 | Leptotrichia hofstadii JCM16775 DNA, complete genome | blastn | 1133 | 302 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia hofstadii | ||
| 18335205 | 18335205 | PRJNA505329_P_NODE_435_length_1933_cov_5.540340_g331_i1 | PRJNA505329 | 435 | 1933 | 5.54034 | 107.0947722 | Leptotrichia sp. oral taxon 212 | 712357 | Bacteria | Bacteria | 2453 | 0 | NTclustered | gi|922689899|gb|CP012410.1| | 712357 | g331 | i1 | 97.115 | 446.114330056906 | 1456 | 38 | 99 | 4 | 4 | 1457 | 1844167 | 1842714 | Leptotrichia sp. oral taxon 212 strain W10393, complete genome | blastn | 862339 | 2453 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. oral taxon 212 | ||
| 20236818 | 20236818 | PRJNA505329_P_NODE_38196_length_174_cov_6.368000_g37725_i0 | PRJNA505329 | 38196 | 174 | 6.368 | 11.08032 | Cetobacterium | 180162 | Bacteria | Bacteria | 222 | 1.05e-53 | NTclustered | gi|2666488225|gb|CP143319.1| | 188913 | g37725 | i0 | 90.058 | 4.91379310344828 | 171 | 17 | 98 | 0 | 4 | 174 | 81071 | 81241 | Cetobacterium somerae strain ceto chromosome, complete genome | blastn | 855 | 222 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium | Cetobacterium somerae | ||
| 20236933 | 20236933 | PRJNA505329_P_NODE_936_length_1282_cov_15.597729_g724_i0 | PRJNA505329 | 936 | 1282 | 15.597729 | 199.96288578 | Fusobacterium | 848 | Bacteria | Bacteria | 2322 | 0 | NTclustered | gi|2078816781|gb|CP071094.1| | 76857 | g724 | i0 | 99.375 | 471.907956318253 | 1281 | 8 | 99 | 0 | 1 | 1281 | 964691 | 963411 | Fusobacterium polymorphum strain THCT15E1 chromosome, complete genome | blastn | 604986 | 2322 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium polymorphum |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;