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contig_metadata

27 rows where analysis = "blastn", bioproject = "PRJNA505329" and tax_clade = "Discoba"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Discoba · 27 ✖

bioproject 1

  • PRJNA505329 · 27 ✖

analysis 1

  • blastn · 27 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
483295 483295 PRJNA505329_P_NODE_26321_length_192_cov_2.853147_g25850_i0 PRJNA505329 26321 192 2.853147 5.47804224 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 135 1.6e-27   NTclustered gi|2651357784|gb|PP174299.1| 1874883 g25850 i0 79.798 3.09895833333333 198 30 98 6 1 189 4005 4201 Allovahlkampfia sp. isolate S28D2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 595 135 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
483600 483600 PRJNA505329_P_NODE_6981_length_278_cov_1.912664_g6510_i0 PRJNA505329 6981 278 1.912664 5.31720592 Trypanosoma conorhini 83891 Euglenozoa other_Eukaryota 407 4.74e-109   NTclustered gi|1673141461|ref|XR_003828664.1| 83891 g6510 i0 96 122.190647482014 250 10 90 0 1 250 5220 4971 Trypanosoma conorhini 28S ribosomal RNA (Tco025E_06705), rRNA blastn 33969 407 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma conorhini
1110288 1110288 PRJNA505329_P_NODE_26121_length_193_cov_1.423611_g25650_i0 PRJNA505329 26121 193 1.423611 2.74756923 Allovahlkampfia 1217108 Heterolobosea other_Eukaryota 342 8.819999999999999e-90   NTclustered gi|399764158|gb|JQ271669.1| 1217110 g25650 i0 99.468 25.4559585492228 188 1 97 0 4 191 222 409 Allovahlkampfia sp. PKD 2011a strain PS1073J 18S ribosomal RNA gene, partial sequence blastn 4913 342 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp. PKD 2011a
1110348 1110348 PRJNA505329_P_NODE_3541_length_455_cov_6.581281_g3086_i0 PRJNA505329 3541 455 6.581281 29.94482855 Naegleria 5761 Heterolobosea other_Eukaryota 835 0   NTclustered gi|32479131|gb|AY321362.1| 51634 g3086 i0 100 97.8615384615385 452 0 99 0 1 452 1763 1312 Naegleria australiensis isolate TT 18S ribosomal RNA gene, partial sequence blastn 44527 835 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria australiensis
1758640 1758640 PRJNA505329_P_NODE_4302_length_388_cov_2.212389_g3837_i0 PRJNA505329 4302 388 2.212389 8.58406932 Crithidia dedva 1134496 Euglenozoa other_Eukaryota 490 6.63e-134   NTclustered gi|1002342152|gb|KT944302.1| 1134496 g3837 i0 89.62 137.585051546392 395 28 99 11 1 385 1742 1351 Crithidia dedva strain D2 28S ribosomal RNA gene, partial sequence blastn 53383 490 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Crithidia Crithidia dedva
2385932 2385932 PRJNA505329_P_NODE_4722_length_361_cov_3.240385_g4256_i0 PRJNA505329 4722 361 3.240385 11.69778985 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 159 1.9599999999999998e-34   NTclustered gi|2414483|emb|Y00055.1| 5656 g4256 i0 95.05 56.7645429362881 101 5 48 0 261 361 8146 8246 Crithidia fasciculata ribosomal DNA repeat (complete) blastn 20492 159 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Crithidia Crithidia fasciculata
4310374 4310374 PRJNA505329_P_NODE_3684_length_440_cov_9.086957_g3225_i0 PRJNA505329 3684 440 9.086957 39.9826108 Naegleria australiensis 51634 Heterolobosea other_Eukaryota 800 0   NTclustered gi|2476253407|gb|OQ627480.1| 51634 g3225 i0 99.771 35.6090909090909 436 1 99 0 1 436 2765 2330 Naegleria australiensis strain PP397 rDNA-containing extrachromosomal element genomic sequence; small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence; and non-ribosomal sequence blastn 15668 800 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria australiensis
4310392 4310392 PRJNA505329_P_NODE_38344_length_174_cov_2.960000_g37873_i0 PRJNA505329 38344 174 2.96 5.1504 Vahlkampfia sp. 1874882 Heterolobosea other_Eukaryota 172 1.08e-38   NTclustered gi|2651357786|gb|PP174301.1| 1874882 g37873 i0 96.19 56.4885057471264 105 4 60 0 67 171 3979 3875 Vahlkampfia sp. isolate 24M small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 9829 172 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Vahlkampfia Vahlkampfia sp.
6213873 6213873 PRJNA505329_P_NODE_445_length_1917_cov_1014.732334_g342_i0 PRJNA505329 445 1917 1014.732334 19452.41884278 Naegleria 5761 Heterolobosea other_Eukaryota 2577 0   NTclustered gi|2618963742|gb|OR769034.1| 5762 g342 i0 99.231 68.5863328116849 1431 6 74 1 490 1915 3019 4449 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 131480 2584 0.997291021671827 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
8136362 8136362 PRJNA505329_P_NODE_18587_length_207_cov_2.575949_g18116_i0 PRJNA505329 18587 207 2.575949 5.33221443 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 97.1 8.25e-16   NTclustered gi|2651357784|gb|PP174299.1| 1874883 g18116 i0 100 6.9951690821256 52 0 25 0 4 55 3688 3739 Allovahlkampfia sp. isolate S28D2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 1448 97.1 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
8136700 8136700 PRJNA505329_P_NODE_48307_length_163_cov_1.815789_g47836_i0 PRJNA505329 48307 163 1.815789 2.95973607 Tetramitus jugosus 166959 Heterolobosea other_Eukaryota 217 4.5499999999999996e-52   NTclustered gi|2233316042|emb|OW569396.1| 166959 g47836 i0 92.208 80.1104294478528 154 11 94 1 5 157 20894 21047 Tetramitus jugosus genome assembly, organelle: mitochondrion blastn 13058 217 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Tetramitus Tetramitus jugosus
11962145 11962145 PRJNA505329_P_NODE_29610_length_188_cov_1.474820_g29139_i0 PRJNA505329 29610 188 1.47482 2.7726616 Trypanosoma theileri 67003 Euglenozoa other_Eukaryota 185 1.52e-42   NTclustered gi|2026667530|dbj|LC618030.1| 67003 g29139 i0 85.714 55.5478723404255 182 19 96 3 1 181 5145 4970 Trypanosoma theileri YMG-11 genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA, ITS3, ITS4, ITS5, partial and complete sequence blastn 10443 185 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma theileri
13864142 13864142 PRJNA505329_P_NODE_40271_length_171_cov_2.893443_g39800_i0 PRJNA505329 40271 171 2.893443 4.94778753 Naegleria 5761 Heterolobosea other_Eukaryota 309 7.7e-80   NTclustered gi|2618963742|gb|OR769034.1| 5762 g39800 i0 99.412 10.1812865497076 170 1 99 0 1 170 5748 5579 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 1741 309 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
13864240 13864240 PRJNA505329_P_NODE_8291_length_252_cov_2.083744_g7820_i0 PRJNA505329 8291 252 2.083744 5.25103488 Leishmania 5658 Euglenozoa other_Eukaryota 272 1.6099999999999999e-68   NTclustered gi|440222381|gb|JX030049.1| 5659 g7820 i0 98.077 91.7777777777778 156 3 62 0 1 156 495 340 Leishmania amazonensis isolate LaPH8.rRNA.25 28S ribosomal RNA (LSU-beta), partial sequence blastn 23128 272 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania amazonensis
14512586 14512586 PRJNA505329_P_NODE_8472_length_249_cov_1.895000_g8001_i0 PRJNA505329 8472 249 1.895 4.71855 Peranema trichophorum 56466 Euglenozoa other_Eukaryota 431 2.4799999999999995e-116   NTclustered gi|27461806|gb|AY130826.1| 56466 g8001 i0 98.367 3 245 4 98 0 2 246 405 161 Peranema trichophorum voucher Carolina Biol. Supp. Co. (CBS) CE 13-1838 large subunit ribosomal RNA gene, partial sequence blastn 747 431 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemidae Peranema Peranema trichophorum
15138375 15138375 PRJNA505329_P_NODE_35052_length_179_cov_3.146154_g34581_i0 PRJNA505329 35052 179 3.146154 5.63161566 Allovahlkampfia 1217108 Heterolobosea other_Eukaryota 322 1.05e-83   NTclustered gi|399764157|gb|JQ271668.1| 1217110 g34581 i0 99.435 66.586592178771 177 1 99 0 1 177 1901 1725 Allovahlkampfia sp. PKD 2011a strain 4165 18S ribosomal RNA gene, partial sequence blastn 11919 322 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp. PKD 2011a
16412965 16412965 PRJNA505329_P_NODE_2373_length_634_cov_5.757265_g1969_i0 PRJNA505329 2373 634 5.757265 36.5010601 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 1155 0   NTclustered gi|59891971|gb|AY753631.1| 266821 g1969 i0 99.683 100.33596214511 631 2 99 0 1 631 1474 844 Bodonidae sp. river Thames 18S ribosomal RNA gene, partial sequence blastn 63613 1160 0.995689655172414 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae   Bodonidae sp. river Thames
17060784 17060784 PRJNA505329_P_NODE_36134_length_178_cov_1.589147_g35663_i0 PRJNA505329 36134 178 1.589147 2.82868166 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 287 3.79e-73   NTclustered gi|2031946985|emb|OD958550.1| 5763 g35663 i0 96.532 30.6123595505618 173 6 97 0 1 173 4210 4382 Naegleria fowleri Karachi_NF001 strain blastn 5449 287 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
17688271 17688271 PRJNA505329_P_NODE_49154_length_162_cov_4.486726_g48683_i0 PRJNA505329 49154 162 4.486726 7.26849612 Vahlkampfia 5770 Heterolobosea other_Eukaryota 291 2.62e-74   NTclustered gi|1860218302|gb|MT648420.1| 74082 g48683 i0 100 21.1111111111111 157 0 97 0 3 159 166 10 Vahlkampfia avara isolate NP10 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 3420 291 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Vahlkampfia Vahlkampfia avara
18334872 18334872 PRJNA505329_P_NODE_17355_length_223_cov_2.045977_g16884_i0 PRJNA505329 17355 223 2.045977 4.56252871 Trypanosoma theileri 67003 Euglenozoa other_Eukaryota 331 2.2700000000000002e-86   NTclustered gi|2026667530|dbj|LC618030.1| 67003 g16884 i0 93.665 154.434977578475 221 14 99 0 1 221 4615 4395 Trypanosoma theileri YMG-11 genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA, ITS3, ITS4, ITS5, partial and complete sequence blastn 34439 331 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma theileri
18335052 18335052 PRJNA505329_P_NODE_32635_length_183_cov_2.298507_g32164_i0 PRJNA505329 32635 183 2.298507 4.20626781 Neobodo curvifilus 351716 Euglenozoa other_Eukaryota 311 2.33e-80   NTclustered gi|197723535|gb|EF681919.2| 351716 g32164 i0 97.778 53.9071038251366 180 4 98 0 4 183 461 640 Neobodo curvifilus strain HFCC37 28S ribosomal RNA gene, partial sequence blastn 9865 311 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Neobodo Neobodo curvifilus
20885504 20885504 PRJNA505329_P_NODE_38357_length_174_cov_2.848000_g37886_i0 PRJNA505329 38357 174 2.848 4.95552 Leptomonas pyrrhocoris 157538 Euglenozoa other_Eukaryota 121 3.9599999999999997e-23   NTclustered gi|1002433688|ref|XR_001548756.1| 157538 g37886 i0 81.25 56.8563218390805 160 21 89 8 17 171 253 98 Leptomonas pyrrhocoris 28S ribosomal RNA (LSU-beta) rRNA blastn 9893 121 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leptomonas Leptomonas pyrrhocoris
20885522 20885522 PRJNA505329_P_NODE_3977_length_414_cov_4.635616_g3512_i0 PRJNA505329 3977 414 4.635616 19.191450240000002 Neobodo curvifilus 351716 Euglenozoa other_Eukaryota 760 0   NTclustered gi|197723535|gb|EF681919.2| 351716 g3512 i0 100 123.299516908213 411 0 99 0 1 411 490 80 Neobodo curvifilus strain HFCC37 28S ribosomal RNA gene, partial sequence blastn 51046 760 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Neobodo Neobodo curvifilus
22787322 22787322 PRJNA505329_P_NODE_26918_length_191_cov_3.732394_g26447_i0 PRJNA505329 26918 191 3.732394 7.12887254 Kinetoplastea 5653 Euglenozoa other_Eukaryota 318 1.4699999999999996e-82   NTclustered gi|1509798611|gb|MH614643.1| 75058 g26447 i0 98.343 135.34554973822 181 3 95 0 4 184 24 204 Bodo saltans small subunit ribosomal RNA gene, partial sequence blastn 25851 318 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
23436074 23436074 PRJNA505329_P_NODE_52699_length_150_cov_5.069307_g52228_i0 PRJNA505329 52699 150 5.069307 7.6039605 Vahlkampfia avara 74082 Heterolobosea other_Eukaryota 272 8.609999999999998e-69   NTclustered gi|2283788571|gb|OP179657.1| 74082 g52228 i0 100 86.1133333333333 147 0 98 0 1 147 1069 923 Vahlkampfia avara isolate VA7 small subunit ribosomal RNA gene, partial sequence blastn 12917 272 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Vahlkampfia Vahlkampfia avara
24062220 24062220 PRJNA505329_P_NODE_2519_length_599_cov_4.494545_g2104_i0 PRJNA505329 2519 599 4.494545 26.92232455 Naegleria 5761 Heterolobosea other_Eukaryota 1094 0   NTclustered gi|32479131|gb|AY321362.1| 51634 g2104 i0 100 98.8130217028381 592 0 99 0 4 595 1291 700 Naegleria australiensis isolate TT 18S ribosomal RNA gene, partial sequence blastn 59189 1094 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria australiensis
25336841 25336841 PRJNA505329_P_NODE_51840_length_155_cov_2.962264_g51369_i0 PRJNA505329 51840 155 2.962264 4.5915092 Kinetoplastea 5653 Euglenozoa other_Eukaryota 263 5.41e-66   NTclustered gi|4468743|emb|AJ009144.1| 5692 g51369 i0 98.658 96.1677419354839 149 0 95 1 6 152 1689 1541 Trypanosoma congolense (kilifi) 18S rRNA gene, isolate WG 5 blastn 14906 265 0.992452830188679 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma congolense

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;