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contig_metadata

21 rows where analysis = "blastn", bioproject = "PRJNA498309" and tax_superkingdom = "Archaea"

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tax_kingdom 2

tax_superkingdom 1

  • Archaea · 21 ✖

bioproject 1

  • PRJNA498309 · 21 ✖

analysis 1

  • blastn · 21 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
482329 482329 PRJNA498309_S_NODE_39161_length_218_cov_2.683060_g36993_i0 PRJNA498309 39161 218 2.68306 5.8490708 uncultured archaeon 115547 Archaea Archaea 261 2.94e-65   NTclustered gi|388254672|gb|JQ768092.1| 115547 g36993 i0 90.5 67.3990825688073 200 16 91 3 21 218 30145 29947 Uncultured archaeon clone 02j05, complete sequence blastn 14693 261 1 Archaea               uncultured archaeon
1109106 1109106 PRJNA498309_P_NODE_82001_length_244_cov_2.434783_g79852_i0 PRJNA498309 82001 244 2.434783 5.94087052 Candidatus Nitrosocosmicus 1826864 Archaea Archaea 435 1.87e-117   NTclustered gi|937513727|gb|CP012850.1| 1353260 g79852 i0 98.77 60.5983606557377 244 3 100 0 1 244 847937 848180 Candidatus Nitrosocosmicus oleophilus strain MY3, complete genome blastn 14786 435 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus oleophilus
1755999 1755999 PRJNA498309_P_NODE_54662_length_352_cov_5.482540_g52514_i0 PRJNA498309 54662 352 5.48254 19.2985408 Methanobacterium alkalithermotolerans 2731220 Archaea Archaea 573 5.739999999999999e-159   NTclustered gi|2029999282|gb|CP058560.1| 2731220 g52514 i0 97.885 0.940340909090909 331 7 94 0 1 331 155002 154672 Methanobacterium alkalithermotolerans strain CAN chromosome, complete genome blastn 331 573 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium alkalithermotolerans
4309526 4309526 PRJNA498309_S_NODE_7224_length_1018_cov_4.959308_g5670_i0 PRJNA498309 7224 1018 4.959308 50.48575544 Halobaculum litoreum 3031998 Archaea Archaea 387 2.49e-102   NTclustered gi|2511735787|gb|CP126156.1| 3031998 g5670 i0 78.912 19.6630648330059 588 110 57 14 296 876 710371 709791 Halobaculum litoreum strain DT92 chromosome, complete genome blastn 20017 387 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halobaculum Halobaculum litoreum
4936885 4936885 PRJNA498309_P_NODE_26344_length_560_cov_1.906310_g24391_i0 PRJNA498309 26344 560 1.90631 10.675336 Candidatus Nitrosocosmicus 1826864 Archaea Archaea 603 1.2099999999999996e-167   NTclustered gi|937513727|gb|CP012850.1| 1353260 g24391 i0 87.337 54.4767857142857 537 55 94 12 4 531 847780 848312 Candidatus Nitrosocosmicus oleophilus strain MY3, complete genome blastn 30507 603 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus oleophilus
5583742 5583742 PRJNA498309_P_NODE_111525_length_170_cov_1.157895_g109376_i0 PRJNA498309 111525 170 1.157895 1.9684215 uncultured archaeon 115547 Archaea Archaea 80.5 6.52e-11   NTclustered gi|1148942727|gb|KY476746.1| 115547 g109376 i0 83.333 1.54705882352941 90 11 52 3 38 125 24132 24219 Uncultured archaeon clone rifcsphigho2_12_scaffold_6798_curated genomic sequence blastn 263 80.5 1 Archaea               uncultured archaeon
5586256 5586256 PRJNA498309_S_NODE_49605_length_167_cov_2.136364_g47437_i0 PRJNA498309 49605 167 2.136364 3.56772788 Halohasta litchfieldiae 1073996 Archaea Archaea 76.8 8.31e-10   NTclustered gi|1279136099|gb|CP024845.1| 1073996 g47437 i0 88.71 0.802395209580838 62 7 37 0 92 153 624368 624307 Halohasta litchfieldiae strain tADL chromosome, complete genome blastn 134 76.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halohasta Halohasta litchfieldiae
6859353 6859353 PRJNA498309_S_NODE_10606_length_771_cov_7.559783_g8815_i0 PRJNA498309 10606 771 7.559783 58.28592693 Halapricum desulfuricans 2841257 Archaea Archaea 440 1.4099999999999996e-118   NTclustered gi|1995629645|gb|CP064787.1| 2841257 g8815 i0 78.099 11.124513618677 726 138 93 21 21 736 1892814 1893528 Halapricum desulfuricans strain HSR12-1 chromosome, complete genome blastn 8577 440 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae Halapricum Halapricum desulfuricans
8135068 8135068 PRJNA498309_S_NODE_20287_length_451_cov_11.425481_g18178_i0 PRJNA498309 20287 451 11.425481 51.52891931 Pyrobaculum aerophilum 13773 Archaea Archaea 750 0   NTclustered gi|18308975|gb|AE009441.1| 178306 g18178 i0 100 0.900221729490022 406 0 90 0 24 429 1078415 1078820 Pyrobaculum aerophilum str. IM2, complete genome blastn 406 750 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Thermoproteales Thermoproteaceae Pyrobaculum Pyrobaculum aerophilum
10037887 10037887 PRJNA498309_S_NODE_13648_length_632_cov_137.234506_g11727_i0 PRJNA498309 13648 632 137.234506 867.32207792 Thermoproteati 1783275 Archaea Archaea 787 0   NTclustered gi|42557759|emb|AJ627422.1| 29281 g11727 i0 90.099 41.8860759493671 606 60 96 0 1 606 40831 41436 Uncultured crenarchaeote genomic fragment 54d9 blastn 26472 791 0.994943109987358 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote
10683603 10683603 PRJNA498309_P_NODE_100349_length_193_cov_2.064103_g98200_i0 PRJNA498309 100349 193 2.064103 3.98371879 Halapricum salinum 1457250 Archaea Archaea 207 3.36e-49   NTclustered gi|1621078650|gb|CP031310.1| 1457250 g98200 i0 86.316 5.72538860103627 190 26 98 0 1 190 2560010 2560199 Halapricum salinum strain CBA1105 chromosome, complete genome blastn 1105 207 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae Halapricum Halapricum salinum
13235263 13235263 PRJNA498309_P_NODE_86911_length_229_cov_1.703125_g84762_i0 PRJNA498309 86911 229 1.703125 3.90015625 Nitrosopumilus sp. K4 2795383 Archaea Archaea 176 1.16e-39   NTclustered gi|2028944715|gb|CP067007.1| 2795383 g84762 i0 82.212 1.81659388646288 208 33 90 4 23 228 201168 201373 Nitrosopumilus sp. K4 chromosome, complete genome blastn 416 176 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosopumilus Nitrosopumilus sp. K4
13862361 13862361 PRJNA498309_P_NODE_26551_length_557_cov_3.734615_g24593_i0 PRJNA498309 26551 557 3.734615 20.80180555 Nitrososphaera 497726 Archaea Archaea 684 0   NTclustered gi|388254672|gb|JQ768092.1| 115547 g24593 i0 89.85 35.5763016157989 532 54 96 0 10 541 29613 29082 Uncultured archaeon clone 02j05, complete sequence blastn 19816 684 1 Archaea               uncultured archaeon
14511255 14511255 PRJNA498309_S_NODE_39532_length_216_cov_1.955801_g37364_i0 PRJNA498309 39532 216 1.955801 4.22453016 Halalkalicoccus jeotgali 413810 Archaea Archaea 217 6.39e-52   NTclustered gi|299123054|gb|CP002062.1| 795797 g37364 i0 88.333 1.49537037037037 180 21 83 0 25 204 2350028 2349849 Halalkalicoccus jeotgali B3, complete genome blastn 323 217 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halalkalicoccus Halalkalicoccus jeotgali
15785142 15785142 PRJNA498309_S_NODE_44853_length_187_cov_1.644737_g42685_i0 PRJNA498309 44853 187 1.644737 3.07565819 Halalkalicoccus jeotgali 413810 Archaea Archaea 206 1.1599999999999998e-48   NTclustered gi|299123054|gb|CP002062.1| 795797 g42685 i0 88.69 10.9304812834225 168 19 90 0 20 187 2316809 2316976 Halalkalicoccus jeotgali B3, complete genome blastn 2044 206 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halalkalicoccus Halalkalicoccus jeotgali
16412245 16412245 PRJNA498309_S_NODE_31013_length_289_cov_4.149606_g28845_i0 PRJNA498309 31013 289 4.149606 11.99236134 Thermoproteati 1783275 Archaea Archaea 267 8.77e-67   NTclustered gi|42557759|emb|AJ627422.1| 29281 g28845 i0 83.448 62.6712802768166 290 44 100 4 1 289 40553 40839 Uncultured crenarchaeote genomic fragment 54d9 blastn 18112 267 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote
18332421 18332421 PRJNA498309_P_NODE_42635_length_420_cov_1.610966_g40518_i0 PRJNA498309 42635 420 1.610966 6.7660572 Pyrobaculum aerophilum 13773 Archaea Archaea 737 0   NTclustered gi|18308975|gb|AE009441.1| 178306 g40518 i0 100 0.95 399 0 95 0 1 399 1078813 1078415 Pyrobaculum aerophilum str. IM2, complete genome blastn 399 737 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Thermoproteales Thermoproteaceae Pyrobaculum Pyrobaculum aerophilum
19608204 19608204 PRJNA498309_S_NODE_32796_length_270_cov_2.957447_g30628_i0 PRJNA498309 32796 270 2.957447 7.9851069 Natranaeroarchaeum sulfidigenes 2784880 Archaea Archaea 265 2.9199999999999997e-66   NTclustered gi|1995626524|gb|CP064786.1| 2784880 g30628 i0 85.115 72.5407407407407 262 35 96 4 11 270 2142596 2142337 Natranaeroarchaeum sulfidigenes strain AArc-S chromosome, complete genome blastn 19586 265 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natronoarchaeaceae Natranaeroarchaeum Natranaeroarchaeum sulfidigenes
20884518 20884518 PRJNA498309_S_NODE_46017_length_182_cov_1.326531_g43849_i0 PRJNA498309 46017 182 1.326531 2.41428642 Salinigranum rubrum 755307 Archaea Archaea 113 7e-21   NTclustered gi|1336553312|gb|CP026310.1| 755307 g43849 i0 80.667 3.20879120879121 150 25 81 4 3 150 163031 163178 Salinigranum rubrum strain GX10 plasmid unnamed1, complete sequence blastn 584 113 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Salinigranum Salinigranum rubrum
22158861 22158861 PRJNA498309_S_NODE_31098_length_288_cov_4.343874_g28930_i0 PRJNA498309 31098 288 4.343874 12.51035712 Halococcus qingdaonensis 224402 Archaea Archaea 303 6.66e-78   NTclustered gi|2281256326|gb|CP101943.1| 224402 g28930 i0 88.98 4.24652777777778 245 27 85 0 19 263 2023645 2023401 Halococcus qingdaonensis strain CGMCC 1.4243 chromosome, complete genome blastn 1223 303 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halococcus Halococcus qingdaonensis
23434065 23434065 PRJNA498309_P_NODE_97099_length_201_cov_1.890244_g94950_i0 PRJNA498309 97099 201 1.890244 3.79939044 Candidatus Nitrosopumilus sediminis 1229909 Archaea Archaea 202 1.6399999999999998e-47   NTclustered gi|407047065|gb|CP003843.1| 1229909 g94950 i0 86.096 4.90049751243781 187 26 93 0 15 201 746224 746410 Candidatus Nitrosopumilus sp. AR2, complete genome blastn 985 202 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosopumilus Candidatus Nitrosopumilus sediminis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;