RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA498309" and tax_phylum = "Thermoproteota"

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tax_superkingdom 1

tax_phylum 1

  • Thermoproteota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA498309 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8135068 8135068 PRJNA498309_S_NODE_20287_length_451_cov_11.425481_g18178_i0 PRJNA498309 20287 451 11.425481 51.52891931 Pyrobaculum aerophilum 13773 Archaea Archaea 750 0   NTclustered gi|18308975|gb|AE009441.1| 178306 g18178 i0 100 0.900221729490022 406 0 90 0 24 429 1078415 1078820 Pyrobaculum aerophilum str. IM2, complete genome blastn 406 750 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Thermoproteales Thermoproteaceae Pyrobaculum Pyrobaculum aerophilum
10037887 10037887 PRJNA498309_S_NODE_13648_length_632_cov_137.234506_g11727_i0 PRJNA498309 13648 632 137.234506 867.32207792 Thermoproteati 1783275 Archaea Archaea 787 0   NTclustered gi|42557759|emb|AJ627422.1| 29281 g11727 i0 90.099 41.8860759493671 606 60 96 0 1 606 40831 41436 Uncultured crenarchaeote genomic fragment 54d9 blastn 26472 791 0.994943109987358 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote
16412245 16412245 PRJNA498309_S_NODE_31013_length_289_cov_4.149606_g28845_i0 PRJNA498309 31013 289 4.149606 11.99236134 Thermoproteati 1783275 Archaea Archaea 267 8.77e-67   NTclustered gi|42557759|emb|AJ627422.1| 29281 g28845 i0 83.448 62.6712802768166 290 44 100 4 1 289 40553 40839 Uncultured crenarchaeote genomic fragment 54d9 blastn 18112 267 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote
18332421 18332421 PRJNA498309_P_NODE_42635_length_420_cov_1.610966_g40518_i0 PRJNA498309 42635 420 1.610966 6.7660572 Pyrobaculum aerophilum 13773 Archaea Archaea 737 0   NTclustered gi|18308975|gb|AE009441.1| 178306 g40518 i0 100 0.95 399 0 95 0 1 399 1078813 1078415 Pyrobaculum aerophilum str. IM2, complete genome blastn 399 737 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Thermoproteales Thermoproteaceae Pyrobaculum Pyrobaculum aerophilum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;