RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA498309" and tax_phylum = "Nitrososphaerota"

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tax_superkingdom 1

tax_phylum 1

  • Nitrososphaerota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA498309 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1109106 1109106 PRJNA498309_P_NODE_82001_length_244_cov_2.434783_g79852_i0 PRJNA498309 82001 244 2.434783 5.94087052 Candidatus Nitrosocosmicus 1826864 Archaea Archaea 435 1.87e-117   NTclustered gi|937513727|gb|CP012850.1| 1353260 g79852 i0 98.77 60.5983606557377 244 3 100 0 1 244 847937 848180 Candidatus Nitrosocosmicus oleophilus strain MY3, complete genome blastn 14786 435 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus oleophilus
4936885 4936885 PRJNA498309_P_NODE_26344_length_560_cov_1.906310_g24391_i0 PRJNA498309 26344 560 1.90631 10.675336 Candidatus Nitrosocosmicus 1826864 Archaea Archaea 603 1.2099999999999996e-167   NTclustered gi|937513727|gb|CP012850.1| 1353260 g24391 i0 87.337 54.4767857142857 537 55 94 12 4 531 847780 848312 Candidatus Nitrosocosmicus oleophilus strain MY3, complete genome blastn 30507 603 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus oleophilus
13235263 13235263 PRJNA498309_P_NODE_86911_length_229_cov_1.703125_g84762_i0 PRJNA498309 86911 229 1.703125 3.90015625 Nitrosopumilus sp. K4 2795383 Archaea Archaea 176 1.16e-39   NTclustered gi|2028944715|gb|CP067007.1| 2795383 g84762 i0 82.212 1.81659388646288 208 33 90 4 23 228 201168 201373 Nitrosopumilus sp. K4 chromosome, complete genome blastn 416 176 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosopumilus Nitrosopumilus sp. K4
23434065 23434065 PRJNA498309_P_NODE_97099_length_201_cov_1.890244_g94950_i0 PRJNA498309 97099 201 1.890244 3.79939044 Candidatus Nitrosopumilus sediminis 1229909 Archaea Archaea 202 1.6399999999999998e-47   NTclustered gi|407047065|gb|CP003843.1| 1229909 g94950 i0 86.096 4.90049751243781 187 26 93 0 15 201 746224 746410 Candidatus Nitrosopumilus sp. AR2, complete genome blastn 985 202 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosopumilus Candidatus Nitrosopumilus sediminis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;