contig_metadata
9 rows where analysis = "blastn", bioproject = "PRJNA498309" and tax_phylum = "Myxococcota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 481621 | 481621 | PRJNA498309_P_NODE_97981_length_199_cov_1.709877_g95832_i0 | PRJNA498309 | 97981 | 199 | 1.709877 | 3.40265523 | Myxococcus sp. MH1 | 2982796 | Bacteria | Bacteria | 158 | 3.56e-34 | NTclustered | gi|2321229309|dbj|AP026947.1| | 2982796 | g95832 | i0 | 82.199 | 55.5829145728643 | 191 | 26 | 94 | 8 | 5 | 191 | 5265649 | 5265463 | Myxococcus sp. MH1 DNA, complete genome | blastn | 11061 | 158 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Myxococcus | Myxococcus sp. MH1 | ||
| 4308147 | 4308147 | PRJNA498309_P_NODE_76344_length_263_cov_1.438053_g74195_i0 | PRJNA498309 | 76344 | 263 | 1.438053 | 3.78207939 | Archangium violaceum | 83451 | Bacteria | Bacteria | 99 | 3.04e-16 | NTclustered | gi|1985695619|gb|CP069396.1| | 83451 | g74195 | i0 | 83.654 | 0.775665399239544 | 104 | 17 | 40 | 0 | 158 | 261 | 12605473 | 12605576 | Archangium violaceum strain SDU8 chromosome, complete genome | blastn | 204 | 99 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Archangium | Archangium violaceum | ||
| 6211858 | 6211858 | PRJNA498309_P_NODE_116185_length_161_cov_2.048387_g114036_i0 | PRJNA498309 | 116185 | 161 | 2.048387 | 3.29790307 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 292 | 7.24e-75 | NTclustered | gi|166033772|gb|EU262998.1| | 43 | g114036 | i0 | 99.379 | 112 | 161 | 1 | 100 | 0 | 1 | 161 | 518 | 678 | Cystobacter fuscus strain NM03 16S ribosomal RNA gene, complete sequence | blastn | 18032 | 292 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Cystobacter | Cystobacter fuscus | ||
| 6857733 | 6857733 | PRJNA498309_P_NODE_108386_length_176_cov_1.561151_g106237_i0 | PRJNA498309 | 108386 | 176 | 1.561151 | 2.74762576 | Pendulispora albinea | 2741071 | Bacteria | Bacteria | 134 | 5.1500000000000005e-27 | NTclustered | gi|2698035964|gb|CP089984.1| | 2741071 | g106237 | i0 | 80.925 | 0.982954545454545 | 173 | 29 | 97 | 4 | 6 | 176 | 4357918 | 4358088 | Pendulispora albinea strain MSr11954 chromosome, complete genome | blastn | 173 | 134 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Pendulisporaceae | Pendulispora | Pendulispora albinea | ||
| 6858156 | 6858156 | PRJNA498309_P_NODE_25186_length_574_cov_17.590317_g23249_i0 | PRJNA498309 | 25186 | 574 | 17.590317 | 100.96841958 | Nannocystis punicea | 2995304 | Bacteria | Bacteria | 148 | 7.019999999999999e-31 | NTclustered | gi|2415023655|gb|CP114040.1| | 2995304 | g23249 | i0 | 83.75 | 0.278745644599303 | 160 | 22 | 28 | 4 | 362 | 519 | 7243545 | 7243388 | Nannocystis poenicansa strain FL3 chromosome, complete genome | blastn | 160 | 148 | 1 | Bacteria | Pseudomonadati | Myxococcota | Nannocystales | Nannocystaceae | Nannocystis | Nannocystis punicea | |||
| 15783530 | 15783530 | PRJNA498309_P_NODE_48153_length_386_cov_29.157593_g46017_i0 | PRJNA498309 | 48153 | 386 | 29.157593 | 112.54830898 | Polyangium aurulentum | 2567896 | Bacteria | Bacteria | 425 | 1.88e-114 | NTclustered | gi|2235996827|gb|CP079217.1| | 2567896 | g46017 | i0 | 90.683 | 180.878238341969 | 322 | 26 | 83 | 4 | 44 | 364 | 444456 | 444774 | Polyangium aurulentum strain SDU3-1 chromosome, complete genome | blastn | 69819 | 425 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Polyangium | Polyangium aurulentum | |||
| 18960223 | 18960223 | PRJNA498309_P_NODE_21635_length_623_cov_1.726962_g19777_i0 | PRJNA498309 | 21635 | 623 | 1.726962 | 10.75897326 | Myxococcus | 32 | Bacteria | Bacteria | 99 | 7.83e-16 | NTclustered | gi|2869653495|gb|CP175551.1| | 33 | g19777 | i0 | 80.147 | 1.10593900481541 | 136 | 23 | 22 | 4 | 47 | 180 | 432801 | 432934 | Myxococcus fulvus strain KYC1117 chromosome, complete genome | blastn | 689 | 99 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Myxococcus | Myxococcus fulvus | ||
| 22156789 | 22156789 | PRJNA498309_P_NODE_114678_length_164_cov_1.409449_g112529_i0 | PRJNA498309 | 114678 | 164 | 1.409449 | 2.31149636 | Corallococcus sp. EGB | 1521117 | Bacteria | Bacteria | 117 | 4.79e-22 | NTclustered | gi|2094564806|gb|CP079946.1| | 1521117 | g112529 | i0 | 91.667 | 4.45731707317073 | 84 | 7 | 51 | 0 | 75 | 158 | 5518242 | 5518325 | Corallococcus sp. EGB chromosome, complete genome | blastn | 731 | 117 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Corallococcus | Corallococcus sp. EGB | ||
| 23434762 | 23434762 | PRJNA498309_S_NODE_37219_length_231_cov_294.693878_g35051_i0 | PRJNA498309 | 37219 | 231 | 294.693878 | 680.74285818 | Anaeromyxobacter oryzae | 2918170 | Bacteria | Bacteria | 300 | 6.68e-77 | NTclustered | gi|2199265233|dbj|AP025591.1| | 2918170 | g35051 | i0 | 93.532 | 64.5281385281385 | 201 | 13 | 87 | 0 | 1 | 201 | 948448 | 948248 | Anaeromyxobacter oryzae DNA, complete genome | blastn | 14906 | 300 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Anaeromyxobacteraceae | Anaeromyxobacter | Anaeromyxobacter oryzae |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;