RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA498309" and tax_phylum = "Chytridiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA498309 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
481306 481306 PRJNA498309_P_NODE_74221_length_270_cov_3.377682_g72072_i0 PRJNA498309 74221 270 3.377682 9.1197414 Spizellomyces punctatus 109760 Fungi Fungi 56.5 0.002   NTclustered gi|1027028008|ref|XM_016756790.1| 645134 g72072 i0 94.444 0.133333333333333 36 2 13 0 23 58 493 528 Spizellomyces punctatus DAOM BR117 histone H3 (SPPG_08644), mRNA blastn 36 56.5 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces punctatus
15783376 15783376 PRJNA498309_P_NODE_40093_length_436_cov_37.298246_g37987_i0 PRJNA498309 40093 436 37.298246 162.62035256 Spizellomyces punctatus 109760 Fungi Fungi 298 4.9e-76   NTclustered gi|1027005164|ref|XM_016754649.1| 645134 g37987 i0 84.076 39.7064220183486 314 44 71 6 85 395 460 150 Spizellomyces punctatus DAOM BR117 60S ribosomal protein L44 (SPPG_06444), mRNA blastn 17312 298 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces punctatus
19606110 19606110 PRJNA498309_P_NODE_117196_length_159_cov_2.901639_g115047_i0 PRJNA498309 117196 159 2.901639 4.61360601 Spizellomyces punctatus 109760 Fungi Fungi 54.7 0.004   NTclustered gi|1026947804|ref|XM_016748426.1| 645134 g115047 i0 100 0.182389937106918 29 0 18 0 43 71 760 788 Spizellomyces punctatus DAOM BR117 uncharacterized protein (SPPG_00089), mRNA blastn 29 54.7 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces punctatus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;