contig_metadata
5 rows where analysis = "blastn", bioproject = "PRJNA498309" and tax_phylum = "Chloroflexota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1755614 | 1755614 | PRJNA498309_P_NODE_32482_length_496_cov_5.943355_g30461_i0 | PRJNA498309 | 32482 | 496 | 5.943355 | 29.4790408 | Phototrophicaceae bacterium | 3069543 | Bacteria | Bacteria | 231 | 5.799999999999999e-56 | NTclustered | gi|2893358443|emb|OZ220735.1| | 3069543 | g30461 | i0 | 76.065 | 118.064516129032 | 493 | 91 | 95 | 25 | 1 | 473 | 2360443 | 2360928 | MAG: Phototrophicaceae bacterium isolate 252cb3c6-93c9-4785-98a9-44529c25b936 genome assembly, chromosome: 1 | blastn | 58560 | 231 | 1 | Bacteria | Bacillati | Chloroflexota | Candidatus Thermofontia | Phototrophicales | Phototrophicaceae | Phototrophicaceae bacterium | |||
| 1755772 | 1755772 | PRJNA498309_P_NODE_42082_length_423_cov_2.924870_g39967_i0 | PRJNA498309 | 42082 | 423 | 2.92487 | 12.3722001 | Dehalococcoidia bacterium | 2026734 | Bacteria | Bacteria | 250 | 1.35e-61 | NTclustered | gi|2893358456|emb|OZ220748.1| | 2026734 | g39967 | i0 | 79.885 | 5.31205673758865 | 348 | 64 | 82 | 6 | 73 | 417 | 1146695 | 1147039 | MAG: Dehalococcoidia bacterium isolate 6c7b36c8-b3ab-4b4c-a352-7e98d29eb5d7 genome assembly, chromosome: 1 | blastn | 2247 | 250 | 1 | Bacteria | Bacillati | Chloroflexota | Dehalococcoidia | Dehalococcoidia bacterium | |||||
| 9408343 | 9408343 | PRJNA498309_P_NODE_16728_length_718_cov_3.549192_g15024_i0 | PRJNA498309 | 16728 | 718 | 3.549192 | 25.48319856 | Anaerolinea thermophila | 167964 | Bacteria | Bacteria | 1254 | 0 | NTclustered | gi|319993263|dbj|AP012029.1| | 926569 | g15024 | i0 | 98.192 | 1.00139275766017 | 719 | 12 | 100 | 1 | 1 | 718 | 411450 | 410732 | Anaerolinea thermophila UNI-1 DNA, complete genome | blastn | 719 | 1254 | 1 | Bacteria | Bacillati | Chloroflexota | Anaerolineae | Anaerolineales | Anaerolineaceae | Anaerolinea | Anaerolinea thermophila | ||
| 10684592 | 10684592 | PRJNA498309_P_NODE_50749_length_372_cov_5.226866_g48603_i0 | PRJNA498309 | 50749 | 372 | 5.226866 | 19.44394152 | uncultured Anaerolineaceae bacterium | 310067 | Bacteria | Bacteria | 520 | 8.069999999999999e-143 | NTclustered | gi|633869141|gb|KJ128030.1| | 310067 | g48603 | i0 | 95.666 | 79.744623655914 | 323 | 14 | 87 | 0 | 50 | 372 | 1 | 323 | Uncultured Anaerolineaceae bacterium clone NJFU_SLX-S190 16S ribosomal RNA gene, partial sequence | blastn | 29665 | 520 | 1 | Bacteria | Bacillati | Chloroflexota | Anaerolineae | Anaerolineales | Anaerolineaceae | uncultured Anaerolineaceae bacterium | |||
| 22158571 | 22158571 | PRJNA498309_S_NODE_18478_length_491_cov_29.333333_g16407_i0 | PRJNA498309 | 18478 | 491 | 29.333333 | 144.02666503 | Phototrophicaceae bacterium | 3069543 | Bacteria | Bacteria | 213 | 2.08e-50 | NTclustered | gi|2893358443|emb|OZ220735.1| | 3069543 | g16407 | i0 | 75.519 | 87.4562118126273 | 482 | 93 | 94 | 23 | 6 | 468 | 2878317 | 2878792 | MAG: Phototrophicaceae bacterium isolate 252cb3c6-93c9-4785-98a9-44529c25b936 genome assembly, chromosome: 1 | blastn | 42941 | 213 | 1 | Bacteria | Bacillati | Chloroflexota | Candidatus Thermofontia | Phototrophicales | Phototrophicaceae | Phototrophicaceae bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;