RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA498309" and tax_phylum = "Candidatus Absconditibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Absconditibacteriota · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA498309 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1757444 1757444 PRJNA498309_S_NODE_39242_length_217_cov_372.395604_g37074_i0 PRJNA498309 39242 217 372.395604 808.09846068 candidate division SR1 bacterium RAAC1_SR1_1 1394709 Bacteria Bacteria 161 3.05e-35   NTclustered gi|563351663|gb|CP006913.1| 1394709 g37074 i0 82.873 45.6267281105991 181 29 83 2 1 180 125727 125906 Candidate division SR1 bacterium RAAC1_SR1_1 chromosome, complete genome blastn 9901 161 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota         candidate division SR1 bacterium RAAC1_SR1_1
13234909 13234909 PRJNA498309_P_NODE_6191_length_1287_cov_13.224800_g5028_i0 PRJNA498309 6191 1287 13.2248 170.203176 candidate division SR1 bacterium RAAC1_SR1_1 1394709 Bacteria Bacteria 1042 0   NTclustered gi|563351663|gb|CP006913.1| 1394709 g5028 i0 82.898 137.776223776224 1187 175 91 27 94 1265 126091 124918 Candidate division SR1 bacterium RAAC1_SR1_1 chromosome, complete genome blastn 177318 1042 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota         candidate division SR1 bacterium RAAC1_SR1_1
15785314 15785314 PRJNA498309_S_NODE_6633_length_1081_cov_42.605163_g5134_i0 PRJNA498309 6633 1081 42.605163 460.56181203 candidate division SR1 bacterium RAAC1_SR1_1 1394709 Bacteria Bacteria 728 0   NTclustered gi|563351663|gb|CP006913.1| 1394709 g5134 i0 82.118 97.5235892691952 878 131 100 25 1 864 125766 124901 Candidate division SR1 bacterium RAAC1_SR1_1 chromosome, complete genome blastn 105423 728 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota         candidate division SR1 bacterium RAAC1_SR1_1
23434062 23434062 PRJNA498309_P_NODE_96899_length_201_cov_8.829268_g94750_i0 PRJNA498309 96899 201 8.829268 17.74682868 Candidatus Absconditicoccus praedator 2735562 Bacteria Bacteria 171 4.6299999999999996e-38   NTclustered gi|2160621446|gb|CP054059.1| 2735562 g94750 i0 84.27 297.114427860697 178 25 87 2 26 200 728820 728643 Candidatus Absconditicoccus praedator strain M39-6 chromosome, complete genome blastn 59720 171 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota   Candidatus Absconditabacterales Candidatus Absconditicoccaceae Candidatus Absconditicoccus Candidatus Absconditicoccus praedator

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;