contig_metadata
12 rows where analysis = "blastn", bioproject = "PRJNA498309" and tax_phylum = "Acidobacteriota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 481633 | 481633 | PRJNA498309_P_NODE_98941_length_196_cov_6.528302_g96792_i0 | PRJNA498309 | 98941 | 196 | 6.528302 | 12.79547192 | Pyrinomonadaceae bacterium | 2283092 | Bacteria | Bacteria | 200 | 5.719999999999998e-47 | NTclustered | gi|2874253710|emb|OY969475.1| | 2283092 | g96792 | i0 | 94.615 | 142.091836734694 | 130 | 6 | 66 | 1 | 47 | 175 | 1822542 | 1822671 | MAG: Pyrinomonadaceae bacterium isolate MFD01916.bin.c.1 genome assembly, chromosome: 1 | blastn | 27850 | 200 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Blastocatellia | Blastocatellales | Pyrinomonadaceae | Pyrinomonadaceae bacterium | |||
| 1755531 | 1755531 | PRJNA498309_P_NODE_27582_length_545_cov_4.574803_g25619_i0 | PRJNA498309 | 27582 | 545 | 4.574803 | 24.93267635 | uncultured Holophaga sp. | 188475 | Bacteria | Bacteria | 219 | 4.989999999999999e-52 | NTclustered | gi|2621785467|emb|OY781925.1| | 188475 | g25619 | i0 | 85.308 | 0.612844036697248 | 211 | 31 | 39 | 0 | 198 | 408 | 2219995 | 2220205 | MAG: uncultured Holophaga sp. isolate 48fd71e5-2ffc-43bf-b6f5-ca4e00a42c30 genome assembly, chromosome: 1 | blastn | 334 | 219 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Holophagae | Holophagales | Holophagaceae | Holophaga | uncultured Holophaga sp. | ||
| 1756529 | 1756529 | PRJNA498309_P_NODE_86682_length_229_cov_21.484375_g84533_i0 | PRJNA498309 | 86682 | 229 | 21.484375 | 49.19921875 | Acidobacteriota bacterium | 1978231 | Bacteria | Bacteria | 250 | 6.75e-62 | NTclustered | gi|1958085512|gb|CP065000.1| | 1978231 | g84533 | i0 | 89.394 | 16.5676855895197 | 198 | 21 | 86 | 0 | 2 | 199 | 3298459 | 3298262 | Acidobacteria bacterium isolate Kalu_18-Q3-R12-55_MAXAC.078_cln chromosome, complete genome | blastn | 3794 | 250 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 1757056 | 1757056 | PRJNA498309_S_NODE_21162_length_434_cov_4.220551_g17954_i1 | PRJNA498309 | 21162 | 434 | 4.220551 | 18.31719134 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 717 | 0 | NTclustered | gi|76574296|gb|DQ139444.1| | 171953 | g17954 | i1 | 97.387 | 100.108294930876 | 421 | 11 | 97 | 0 | 14 | 434 | 1046 | 626 | Uncultured Acidobacteria bacterium clone CAL5 23S ribosomal RNA gene, partial sequence | blastn | 43447 | 717 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 1757475 | 1757475 | PRJNA498309_S_NODE_40602_length_209_cov_3.275862_g38434_i0 | PRJNA498309 | 40602 | 209 | 3.275862 | 6.84655158 | Pyrinomonadaceae bacterium | 2283092 | Bacteria | Bacteria | 281 | 2.15e-71 | NTclustered | gi|2874253710|emb|OY969475.1| | 2283092 | g38434 | i0 | 93.651 | 58.511961722488 | 189 | 11 | 90 | 1 | 21 | 209 | 1822024 | 1821837 | MAG: Pyrinomonadaceae bacterium isolate MFD01916.bin.c.1 genome assembly, chromosome: 1 | blastn | 12229 | 281 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Blastocatellia | Blastocatellales | Pyrinomonadaceae | Pyrinomonadaceae bacterium | |||
| 5585908 | 5585908 | PRJNA498309_S_NODE_32465_length_273_cov_309.424370_g30297_i0 | PRJNA498309 | 32465 | 273 | 309.42437 | 844.7285301 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 350 | 7.94e-92 | NTclustered | gi|2874253862|emb|OY969918.1| | 171953 | g30297 | i0 | 94.69 | 80.7069597069597 | 226 | 10 | 82 | 1 | 26 | 249 | 2908093 | 2907868 | MAG: uncultured Acidobacteriota bacterium isolate MFD04967.bin.c.4 genome assembly, chromosome: 1 | blastn | 22033 | 350 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 10684898 | 10684898 | PRJNA498309_P_NODE_68369_length_292_cov_1.976471_g66220_i0 | PRJNA498309 | 68369 | 292 | 1.976471 | 5.77129532 | Luteitalea pratensis | 1855912 | Bacteria | Bacteria | 239 | 1.94e-58 | NTclustered | gi|1016914409|gb|CP015136.1| | 1855912 | g66220 | i0 | 88.06 | 0.688356164383562 | 201 | 24 | 69 | 0 | 91 | 291 | 1994580 | 1994780 | Luteitalea pratensis strain DSM 100886 chromosome, complete genome | blastn | 201 | 239 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Vicinamibacteria | Vicinamibacterales | Vicinamibacteraceae | Luteitalea | Luteitalea pratensis | ||
| 15785060 | 15785060 | PRJNA498309_S_NODE_40913_length_207_cov_9.453488_g38745_i0 | PRJNA498309 | 40913 | 207 | 9.453488 | 19.56872016 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 377 | 2.63e-100 | NTclustered | gi|430803044|gb|KC011153.1| | 171953 | g38745 | i0 | 99.519 | 100.492753623188 | 208 | 0 | 100 | 1 | 1 | 207 | 486 | 693 | Uncultured Acidobacteria bacterium clone bsc54 16S ribosomal RNA gene, partial sequence | blastn | 20802 | 377 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 19607049 | 19607049 | PRJNA498309_P_NODE_62776_length_315_cov_4.388489_g60628_i0 | PRJNA498309 | 62776 | 315 | 4.388489 | 13.82374035 | Acidobacteriota bacterium | 1978231 | Bacteria | Bacteria | 339 | 2.02e-88 | NTclustered | gi|1958085512|gb|CP065000.1| | 1978231 | g60628 | i0 | 88.421 | 323.422222222222 | 285 | 28 | 90 | 4 | 11 | 292 | 3298459 | 3298177 | Acidobacteria bacterium isolate Kalu_18-Q3-R12-55_MAXAC.078_cln chromosome, complete genome | blastn | 101878 | 339 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 19607396 | 19607396 | PRJNA498309_P_NODE_85736_length_232_cov_3.830769_g83587_i0 | PRJNA498309 | 85736 | 232 | 3.830769 | 8.88738408 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 322 | 1.43e-83 | NTclustered | gi|2874254091|emb|OY970174.1| | 171953 | g83587 | i0 | 94.313 | 93.8362068965517 | 211 | 11 | 91 | 1 | 1 | 211 | 4355825 | 4355616 | MAG: uncultured Acidobacteriota bacterium isolate MFD01275.bin.c.18 genome assembly, chromosome: 1 | blastn | 21770 | 322 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 19608662 | 19608662 | PRJNA498309_S_NODE_7736_length_967_cov_125.156652_g6151_i0 | PRJNA498309 | 7736 | 967 | 125.156652 | 1210.26482484 | Luteitalea pratensis | 1855912 | Bacteria | Bacteria | 1003 | 0 | NTclustered | gi|1016914409|gb|CP015136.1| | 1855912 | g6151 | i0 | 91.417 | 0.886246122026887 | 734 | 60 | 76 | 1 | 24 | 754 | 1995313 | 1994580 | Luteitalea pratensis strain DSM 100886 chromosome, complete genome | blastn | 857 | 1003 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Vicinamibacteria | Vicinamibacterales | Vicinamibacteraceae | Luteitalea | Luteitalea pratensis | ||
| 23434398 | 23434398 | PRJNA498309_S_NODE_20059_length_456_cov_150.080760_g17954_i0 | PRJNA498309 | 20059 | 456 | 150.08076 | 684.3682656 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 747 | 0 | NTclustered | gi|76574296|gb|DQ139444.1| | 171953 | g17954 | i0 | 98.807 | 93.9078947368421 | 419 | 5 | 92 | 0 | 38 | 456 | 1044 | 626 | Uncultured Acidobacteria bacterium clone CAL5 23S ribosomal RNA gene, partial sequence | blastn | 42822 | 747 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;