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contig_metadata

10 rows where analysis = "blastn", bioproject = "PRJNA498309" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 10 ✖

bioproject 1

  • PRJNA498309 · 10 ✖

analysis 1

  • blastn · 10 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
481209 481209 PRJNA498309_P_NODE_66681_length_298_cov_18.555556_g64533_i0 PRJNA498309 66681 298 18.555556 55.29555688 Candidatus Saccharibacteria bacterium oral taxon 488 713059 Bacteria Bacteria 78.7 4.57e-10   NTclustered gi|1663050868|gb|CP040003.1| 713059 g64533 i0 95.833 3.70805369127517 48 2 16 0 22 69 682114 682067 Candidatus Saccharibacteria bacterium oral taxon 488 strain AC001 chromosome, complete genome blastn 1105 78.7 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium oral taxon 488
1757444 1757444 PRJNA498309_S_NODE_39242_length_217_cov_372.395604_g37074_i0 PRJNA498309 39242 217 372.395604 808.09846068 candidate division SR1 bacterium RAAC1_SR1_1 1394709 Bacteria Bacteria 161 3.05e-35   NTclustered gi|563351663|gb|CP006913.1| 1394709 g37074 i0 82.873 45.6267281105991 181 29 83 2 1 180 125727 125906 Candidate division SR1 bacterium RAAC1_SR1_1 chromosome, complete genome blastn 9901 161 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota         candidate division SR1 bacterium RAAC1_SR1_1
4309452 4309452 PRJNA498309_S_NODE_53144_length_154_cov_1.462185_g50976_i0 PRJNA498309 53144 154 1.462185 2.2517649 Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17 1619070 Bacteria Bacteria 154 3.37e-33   NTclustered gi|837350690|gb|CP011211.1| 1619070 g50976 i0 85.621 80.7402597402597 153 14 97 6 2 150 850051 849903 Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17, complete genome blastn 12434 154 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17
6858037 6858037 PRJNA498309_P_NODE_18666_length_675_cov_6.844828_g16891_i0 PRJNA498309 18666 675 6.844828 46.202589 Candidatus Nanosynbacter sp. HMT-352 2899133 Bacteria Bacteria 93.5 3.96e-14   NTclustered gi|2218409032|gb|CP089290.1| 2899133 g16891 i0 85.556 5.39111111111111 90 11 13 2 466 554 164791 164879 Candidatus Nanosynbacter sp. HMT-352 strain TM7-001 chromosome blastn 3639 93.5 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Nanosynbacterales Candidatus Nanosynbacteraceae Candidatus Nanosynbacter Candidatus Nanosynbacter sp. HMT-352
10684836 10684836 PRJNA498309_P_NODE_65109_length_305_cov_2.529851_g62961_i0 PRJNA498309 65109 305 2.529851 7.71604555 uncultured Methylomirabilota bacterium 991135 Bacteria Bacteria 73.1 2.18e-8   NTclustered gi|2874253892|emb|OY970067.1| 991135 g62961 i0 85.507 0.226229508196721 69 10 23 0 198 266 241345 241413 MAG: uncultured candidate division NC10 bacterium isolate MFD01231.bin.c.1 genome assembly, chromosome: 1 blastn 69 73.1 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         uncultured Methylomirabilota bacterium
13234909 13234909 PRJNA498309_P_NODE_6191_length_1287_cov_13.224800_g5028_i0 PRJNA498309 6191 1287 13.2248 170.203176 candidate division SR1 bacterium RAAC1_SR1_1 1394709 Bacteria Bacteria 1042 0   NTclustered gi|563351663|gb|CP006913.1| 1394709 g5028 i0 82.898 137.776223776224 1187 175 91 27 94 1265 126091 124918 Candidate division SR1 bacterium RAAC1_SR1_1 chromosome, complete genome blastn 177318 1042 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota         candidate division SR1 bacterium RAAC1_SR1_1
14510469 14510469 PRJNA498309_P_NODE_99052_length_196_cov_2.440252_g96903_i0 PRJNA498309 99052 196 2.440252 4.78289392 TM7 phylum sp. oral taxon 349 713051 Bacteria Bacteria 147 7.56e-31   NTclustered gi|2028829559|gb|CP072328.1| 713051 g96903 i0 80.729 0.979591836734694 192 34 97 3 3 192 26819 27009 TM7 phylum sp. oral taxon 349 strain PM007 chromosome, complete genome blastn 192 147 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         TM7 phylum sp. oral taxon 349
15785314 15785314 PRJNA498309_S_NODE_6633_length_1081_cov_42.605163_g5134_i0 PRJNA498309 6633 1081 42.605163 460.56181203 candidate division SR1 bacterium RAAC1_SR1_1 1394709 Bacteria Bacteria 728 0   NTclustered gi|563351663|gb|CP006913.1| 1394709 g5134 i0 82.118 97.5235892691952 878 131 100 25 1 864 125766 124901 Candidate division SR1 bacterium RAAC1_SR1_1 chromosome, complete genome blastn 105423 728 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota         candidate division SR1 bacterium RAAC1_SR1_1
23433816 23433816 PRJNA498309_P_NODE_80099_length_250_cov_2.676056_g77950_i0 PRJNA498309 80099 250 2.676056 6.69014 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 147 1.01e-30   NTclustered gi|1950821269|gb|CP066696.1| 2026720 g77950 i0 93.069 9.46 101 5 40 2 88 188 38289 38387 Candidatus Saccharibacteria bacterium isolate NC_groundwater_1927_Pr3_S-0.2um_48_6 chromosome blastn 2365 147 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
23434062 23434062 PRJNA498309_P_NODE_96899_length_201_cov_8.829268_g94750_i0 PRJNA498309 96899 201 8.829268 17.74682868 Candidatus Absconditicoccus praedator 2735562 Bacteria Bacteria 171 4.6299999999999996e-38   NTclustered gi|2160621446|gb|CP054059.1| 2735562 g94750 i0 84.27 297.114427860697 178 25 87 2 26 200 728820 728643 Candidatus Absconditicoccus praedator strain M39-6 chromosome, complete genome blastn 59720 171 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota   Candidatus Absconditabacterales Candidatus Absconditicoccaceae Candidatus Absconditicoccus Candidatus Absconditicoccus praedator

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;