RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA495917" and tax_phylum = "Pisuviricota"

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tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA495917 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
477546 477546 PRJNA495917_S_NODE_1_length_7175_cov_80.479552_g0_i0 PRJNA495917 1 7175 80.479552 5774.407856 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 2970 0   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g0 i0 96.745 0.670662020905923 1782 55 67 3 5389 7169 5329 7108 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 4812 2970 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
8130546 8130546 PRJNA495917_S_NODE_14447_length_156_cov_1.933884_g14253_i0 PRJNA495917 14447 156 1.933884 3.01685904 Zebrafish picornavirus 1 2304617 Viruses Viruses 283 4.1899999999999994e-72   NTclustered gi|2500378199|ref|NC_076245.1| 2304617 g14253 i0 99.363 3.01923076923077 157 0 100 1 1 156 7940 8096 Zebrafish picornavirus 1 strain IDEXX/ZfPV-1/2017/USA, complete genome blastn 471 283 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
23429954 23429954 PRJNA495917_S_NODE_6499_length_202_cov_3.245509_g6305_i0 PRJNA495917 6499 202 3.245509 6.55592818 Zebrafish picornavirus 1 2304617 Viruses Viruses 357 3.3299999999999996e-94   NTclustered gi|2500378199|ref|NC_076245.1| 2304617 g6305 i0 98.515 3 202 3 100 0 1 202 6379 6580 Zebrafish picornavirus 1 strain IDEXX/ZfPV-1/2017/USA, complete genome blastn 606 357 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;