RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA495917" and tax_phylum = "Acidobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Acidobacteriota · 8 ✖

tax_kingdom 1

bioproject 1

  • PRJNA495917 · 8 ✖

analysis 1

  • blastn · 8 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3659089 3659089 PRJNA495917_S_NODE_3403_length_265_cov_15.665217_g3209_i0 PRJNA495917 3403 265 15.665217 41.512825049999996 Bacteria 2 Bacteria Bacteria 457 4.39e-124   NTclustered gi|218533824|gb|FJ490338.1| 171953 g3209 i0 97.736 99.3849056603774 265 6 100 0 1 265 269 5 Uncultured Acidobacteria bacterium clone H_18 16S ribosomal RNA gene, partial sequence blastn 26337 457 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
4304291 4304291 PRJNA495917_S_NODE_1084_length_454_cov_96.167064_g892_i0 PRJNA495917 1084 454 96.167064 436.59847056 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 542 2.14e-149   NTclustered gi|105990458|gb|DQ514189.1| 171953 g892 i0 96.914 73.9030837004405 324 9 71 1 131 454 893 571 Uncultured Acidobacteria bacterium clone 500M2_F6 16S ribosomal RNA gene, partial sequence blastn 33552 542 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
6855036 6855036 PRJNA495917_S_NODE_1046_length_463_cov_24.282710_g854_i0 PRJNA495917 1046 463 24.28271 112.4289473 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 510 6.17e-140   NTclustered gi|217038899|gb|EU810989.1| 171953 g854 i0 94.562 303.980561555076 331 17 71 1 1 330 332 2 Uncultured Acidobacteria bacterium clone 01QD9 23S ribosomal RNA gene, partial sequence blastn 140743 510 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
6855097 6855097 PRJNA495917_S_NODE_14406_length_156_cov_2.793388_g14212_i0 PRJNA495917 14406 156 2.793388 4.35768528 Acidobacteriota bacterium 1978231 Bacteria Bacteria 93.5 7.57e-15   NTclustered gi|1958085512|gb|CP065000.1| 1978231 g14212 i0 83.654 27.3397435897436 104 11 64 5 43 142 1523757 1523656 Acidobacteria bacterium isolate Kalu_18-Q3-R12-55_MAXAC.078_cln chromosome, complete genome blastn 4265 93.5 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
9405451 9405451 PRJNA495917_S_NODE_1768_length_361_cov_136.496933_g1574_i0 PRJNA495917 1768 361 136.496933 492.75392813 Acidobacteriota bacterium 1978231 Bacteria Bacteria 569 7.639999999999997e-158   NTclustered gi|1958085512|gb|CP065000.1| 1978231 g1574 i0 96 137.537396121884 350 14 97 0 12 361 3301046 3300697 Acidobacteria bacterium isolate Kalu_18-Q3-R12-55_MAXAC.078_cln chromosome, complete genome blastn 49651 569 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
11310966 11310966 PRJNA495917_S_NODE_10209_length_173_cov_5.797101_g10015_i0 PRJNA495917 10209 173 5.797101 10.02898473 Bacteria 2 Bacteria Bacteria 143 8.38e-30   NTclustered gi|2874253885|emb|OY970060.1| 171953 g10015 i0 95.506 8.67630057803468 89 4 51 0 1 89 4841884 4841796 MAG: uncultured Acidobacteriota bacterium isolate MFD01916.bin.c.4 genome assembly, chromosome: 1 blastn 1501 143 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
22153996 22153996 PRJNA495917_S_NODE_1078_length_456_cov_33.163895_g886_i0 PRJNA495917 1078 456 33.163895 151.2273612 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 577 5.899999999999998e-160   NTclustered gi|217038907|gb|EU810998.1| 171953 g886 i0 97.898 365.75 333 7 73 0 1 333 333 1 Uncultured Acidobacteria bacterium clone 01QCK 23S ribosomal RNA gene, partial sequence blastn 166782 577 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
24703547 24703547 PRJNA495917_S_NODE_760_length_534_cov_20.775551_g583_i0 PRJNA495917 760 534 20.775551 110.94144234 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 797 0   NTclustered gi|2874253710|emb|OY969475.1| 2283092 g583 i0 93.645 105.715355805243 535 31 100 3 1 534 1821532 1822064 MAG: Pyrinomonadaceae bacterium isolate MFD01916.bin.c.1 genome assembly, chromosome: 1 blastn 56452 797 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;