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contig_metadata

257 rows where analysis = "blastn", bioproject = "PRJNA495917" and tax_kingdom = "Viridiplantae"

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tax_phylum 2

tax_clade 2

tax_superkingdom 1

tax_kingdom 1

  • Viridiplantae · 257 ✖

bioproject 1

  • PRJNA495917 · 257 ✖

analysis 1

  • blastn · 257 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
477441 477441 PRJNA495917_S_NODE_10001_length_175_cov_1.050000_g9807_i0 PRJNA495917 10001 175 1.05 1.8375 Trebouxia sp. SL0000003 3350044 Plants Plants 268 1.34e-67   NTclustered gi|2917929622|emb|OZ234910.1| 3350044 g9807 i0 94.286 84.52 175 10 100 0 1 175 1845879 1845705 Trebouxia sp. SL0000003 genome assembly, chromosome: 5 blastn 14791 268 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. SL0000003
477444 477444 PRJNA495917_S_NODE_10301_length_173_cov_1.492754_g10107_i0 PRJNA495917 10301 173 1.492754 2.58246442 Triticum aestivum 4565 Plants Plants 296 6.08e-76   NTclustered gi|1282798539|gb|MG560142.1| 4565 g10107 i0 97.688 742.693641618497 173 2 100 1 1 173 209698 209868 Triticum aestivum omega gliadin-D1, omega gliadin-D2, omega gliadin-D3, gamma gliadin-D1, delta gliadin-D1, gamma gliadin-D2, gamma gliadin-D3, gamma gliadin-D4, LMW-D1, LMW-D2, LMW-D3, LMW-D6, and LMW-D7 genes, complete cds blastn 128486 296 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Triticum Triticum aestivum
477446 477446 PRJNA495917_S_NODE_10421_length_172_cov_5.204380_g10227_i0 PRJNA495917 10421 172 5.20438 8.9515336 Trebouxia sp. SL0000003 3350044 Plants Plants 278 2.19e-70   NTclustered gi|2917929625|emb|OZ234913.1| 3350044 g10227 i0 95.93 2 172 6 100 1 1 172 1366585 1366755 Trebouxia sp. SL0000003 genome assembly, chromosome: 8 blastn 344 278 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. SL0000003
477494 477494 PRJNA495917_S_NODE_13461_length_159_cov_2.564516_g13267_i0 PRJNA495917 13461 159 2.564516 4.07758044 Trebouxia sp. SL0000003 3350044 Plants Plants 67.6 4.7e-7   NTclustered gi|2917930141|emb|OZ234926.1| 3350044 g13267 i0 93.478 0.465408805031447 46 1 28 2 1 44 119817 119772 Trebouxia sp. SL0000003 genome assembly, organelle: mitochondrion blastn 74 67.6 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. SL0000003
477529 477529 PRJNA495917_S_NODE_16061_length_152_cov_1.025641_g15867_i0 PRJNA495917 16061 152 1.025641 1.55897432 Trebouxia sp. SL0000003 3350044 Plants Plants 122 9.34e-24   NTclustered gi|2917929690|emb|OZ234918.1| 3350044 g15867 i0 82.639 0.947368421052632 144 20 93 5 12 152 841227 841086 Trebouxia sp. SL0000003 genome assembly, chromosome: 13 blastn 144 122 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. SL0000003
477553 477553 PRJNA495917_S_NODE_3401_length_265_cov_24.178261_g3207_i0 PRJNA495917 3401 265 24.178261 64.07239165 Trebouxia sp. SL0000003 3350044 Plants Plants 379 9.78e-101   NTclustered gi|2917929622|emb|OZ234910.1| 3350044 g3207 i0 93.359 1.93207547169811 256 17 97 0 10 265 961958 962213 Trebouxia sp. SL0000003 genome assembly, chromosome: 5 blastn 512 379 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. SL0000003
477568 477568 PRJNA495917_S_NODE_4981_length_225_cov_17.615789_g4787_i0 PRJNA495917 4981 225 17.615789 39.63552525 Quercus rubra 3512 Plants Plants 416 6.159999999999998e-112   NTclustered gi|1878849207|gb|MT796543.1| 3512 g4787 i0 100 100.386666666667 225 0 100 0 1 225 4110 3886 Quercus rubra isolate DM598 small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 22587 416 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fagales Fagaceae Quercus Quercus rubra
477572 477572 PRJNA495917_S_NODE_561_length_611_cov_9.053819_g399_i0 PRJNA495917 561 611 9.053819 55.31883409 Trebouxia aggregata 160068 Plants Plants 867 0   NTclustered gi|162134245|gb|EU123948.1| 160068 g399 i0 95.264 18.4828150572831 549 22 90 4 64 610 5136 5682 Trebouxia aggregata strain SAG 219-1d ribosomal protein S2 (rps2) gene, complete cds; tRNA-Met (trnMe(cau)) and large subunit ribosomal RNA (rnl) genes, complete sequence; putative site-specific DNA endonuclease (orf365) gene, complete cds; small subunit ribosomal RNA (rns) and tRNA-Met (trnMf(cau)) genes, complete sequence; cytochrome c oxidase subunit 1 (cox1), putative site-specific DNA endonuclease (orf335), and putative site-specific DNA endonuclease (orf256) genes, complete cds; tRNA-Phe (trnF(gaa)) and tRNA-Lys (trnK(uuu)) genes, complete sequence; and apocytochrome b (cob) and putative site-specific DNA endonuclease (orf334) genes, complete cds; mitochondrial blastn 11293 867 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia aggregata
477581 477581 PRJNA495917_S_NODE_6141_length_207_cov_1.313953_g5947_i0 PRJNA495917 6141 207 1.313953 2.71988271 Triticum aestivum 4565 Plants Plants 281 2.12e-71   NTclustered gi|300681419|emb|FN564427.1| 4565 g5947 i0 91.388 617.932367149758 209 12 100 4 1 207 54524 54320 Triticum aestivum chromosome 3B-specific BAC library, contig ctg0079b blastn 127912 281 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Triticum Triticum aestivum
1107822 1107822 PRJNA495917_S_NODE_2701_length_297_cov_1.473282_g2507_i0 PRJNA495917 2701 297 1.473282 4.37564754 Eukaryota 2759 Plants Plants 228 4.269999999999999e-55   NTclustered gi|1808706934|gb|MH511745.1| 51721 g2507 i0 81.685 40.993265993266 273 50 92 0 1 273 9974 10246 Volvulina compacta photosystem II protein J (psbJ) and photosystem II reaction center protein D2 (psbD) genes, complete cds; plastid blastn 12175 228 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvulina Volvulina compacta
1107824 1107824 PRJNA495917_S_NODE_3221_length_273_cov_7.319328_g3027_i0 PRJNA495917 3221 273 7.319328 19.98176544 Acer 4022 Plants Plants 488 1.6099999999999996e-133   NTclustered gi|1973623053|gb|MW070171.1| 45314 g3027 i0 98.901 100 273 3 100 0 1 273 7623 7351 Acer rubrum external transcribed spacer small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence blastn 27300 488 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Sapindales Sapindaceae Acer Acer rubrum
1107827 1107827 PRJNA495917_S_NODE_3321_length_268_cov_318.412017_g3127_i0 PRJNA495917 3321 268 318.412017 853.34420556 Eukaryota 2759 Plants Plants 496 9.429999999999999e-136   NTclustered gi|146141714|gb|EF522218.1| 171245 g3127 i0 100 105.358208955224 268 0 100 0 1 268 588 855 Uncultured chlorophyte clone EPLS029 16S ribosomal RNA gene, partial sequence blastn 28236 496 1 Eukaryota   Viridiplantae Chlorophyta         uncultured Chlorophyta
1752439 1752439 PRJNA495917_S_NODE_14902_length_155_cov_1.358333_g14708_i0 PRJNA495917 14902 155 1.358333 2.10541615 Batophora oerstedii 3140 Plants Plants 202 1.2e-47   NTclustered gi|1483570403|gb|MH545242.1| 3140 g14708 i0 89.61 82.9870967741935 154 16 99 0 2 155 323 170 Batophora oerstedii photosystem II protein D1 (psbA) gene, complete cds; chloroplast blastn 12863 202 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Dasycladales Dasycladaceae Batophora Batophora oerstedii
1752468 1752468 PRJNA495917_S_NODE_16602_length_150_cov_2.452174_g16408_i0 PRJNA495917 16602 150 2.452174 3.678261 Acer campestre 66205 Plants Plants 278 1.85e-70   NTclustered gi|2468785252|gb|OP221077.1| 66205 g16408 i0 100 100 150 0 100 0 1 150 3554 3703 Acer campestre isolate HZ025 external transcribed spacer small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence blastn 15000 278 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Sapindales Sapindaceae Acer Acer campestre
1752469 1752469 PRJNA495917_S_NODE_16642_length_150_cov_1.973913_g16448_i0 PRJNA495917 16642 150 1.973913 2.9608695 Trebouxia sp. SL0000003 3350044 Plants Plants 222 8.8e-54   NTclustered gi|2917930141|emb|OZ234926.1| 3350044 g16448 i0 93.333 109.593333333333 150 10 100 0 1 150 12227 12078 Trebouxia sp. SL0000003 genome assembly, organelle: mitochondrion blastn 16439 222 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. SL0000003
1752477 1752477 PRJNA495917_S_NODE_1942_length_347_cov_4.387821_g1748_i0 PRJNA495917 1942 347 4.387821 15.22573887 uncultured Trebouxia photobiont 285713 Plants Plants 137 8.82e-28   NTclustered gi|1273623725|gb|KY033354.1| 285713 g1748 i0 79.703 0.734870317002882 202 32 72 6 148 345 687 491 Uncultured Trebouxia photobiont voucher Lendemer 46119 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 255 137 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia uncultured Trebouxia photobiont
1752500 1752500 PRJNA495917_S_NODE_3722_length_254_cov_11.164384_g3528_i0 PRJNA495917 3722 254 11.164384 28.35753536 Trebouxia sp. SL0000003 3350044 Plants Plants 348 2.6300000000000003e-91   NTclustered gi|2917929622|emb|OZ234910.1| 3350044 g3528 i0 91.339 2.00393700787402 254 22 100 0 1 254 961960 962213 Trebouxia sp. SL0000003 genome assembly, chromosome: 5 blastn 509 348 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. SL0000003
1752501 1752501 PRJNA495917_S_NODE_3782_length_252_cov_13.986175_g3588_i0 PRJNA495917 3782 252 13.986175 35.245161 Symbiochloris tschermakiae 1853862 Plants Plants 387 5.519999999999998e-103   NTclustered gi|189038677|gb|EU734575.1| 1853862 g3588 i0 94.444 98.4126984126984 252 13 100 1 1 252 1322 1072 Symbiochloris tschermakiae strain SAG 46.85 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8 S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence blastn 24800 387 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Symbiochloris Symbiochloris tschermakiae
1752506 1752506 PRJNA495917_S_NODE_422_length_684_cov_110.315871_g106_i1 PRJNA495917 422 684 110.315871 754.56055764 Trebouxia aggregata 160068 Plants Plants 717 0   NTclustered gi|162134245|gb|EU123948.1| 160068 g106 i1 88.394 40.3026315789474 629 30 86 28 94 682 15213 15838 Trebouxia aggregata strain SAG 219-1d ribosomal protein S2 (rps2) gene, complete cds; tRNA-Met (trnMe(cau)) and large subunit ribosomal RNA (rnl) genes, complete sequence; putative site-specific DNA endonuclease (orf365) gene, complete cds; small subunit ribosomal RNA (rns) and tRNA-Met (trnMf(cau)) genes, complete sequence; cytochrome c oxidase subunit 1 (cox1), putative site-specific DNA endonuclease (orf335), and putative site-specific DNA endonuclease (orf256) genes, complete cds; tRNA-Phe (trnF(gaa)) and tRNA-Lys (trnK(uuu)) genes, complete sequence; and apocytochrome b (cob) and putative site-specific DNA endonuclease (orf334) genes, complete cds; mitochondrial blastn 27567 717 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia aggregata
1752535 1752535 PRJNA495917_S_NODE_6222_length_206_cov_1.397661_g6028_i0 PRJNA495917 6222 206 1.397661 2.87918166 Trebouxia aggregata 160068 Plants Plants 130 8.09e-26   NTclustered gi|162134313|gb|EU123973.1| 160068 g6028 i0 91.489 7.97572815533981 94 8 46 0 43 136 4108 4015 Trebouxia aggregata strain SAG 219-1d septum site-determining protein (minD) gene, complete cds; tRNA-Arg (trnR(acg)) gene, complete sequence; and apocytochrome f of cytochrome b6/f complex (petA) gene, complete cds; chloroplast blastn 1643 130 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia aggregata
1752570 1752570 PRJNA495917_S_NODE_8902_length_181_cov_3.280822_g8708_i0 PRJNA495917 8902 181 3.280822 5.93828782 Trebouxia aggregata 160068 Plants Plants 335 1.36e-87   NTclustered gi|162134316|gb|EU123974.1| 160068 g8708 i0 100 96.8508287292818 181 0 100 0 1 181 1577 1757 Trebouxia aggregata strain SAG 219-1d D2 reaction center protein of photosystem II (psbD), CP43 chlorophyll apoprotein of photosystem II (psbC), apocytochrome b6 of cytochrome b6/f complex (petB), and subunit IV of cytochrome b6/f complex (petD) genes, complete cds; chloroplast blastn 17530 335 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia aggregata
2383458 2383458 PRJNA495917_S_NODE_222_length_891_cov_185.299065_g134_i0 PRJNA495917 222 891 185.299065 1651.01466915 Trebouxia 13786 Plants Plants 1369 0   NTclustered gi|1273623725|gb|KY033354.1| 285713 g134 i0 95.465 96.337822671156 860 36 96 1 1 857 6816 5957 Uncultured Trebouxia photobiont voucher Lendemer 46119 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 85837 1375 0.995636363636364 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia uncultured Trebouxia photobiont
2383466 2383466 PRJNA495917_S_NODE_3102_length_278_cov_8.600823_g2908_i0 PRJNA495917 3102 278 8.600823 23.91028794 Symbiochloris 1853743 Plants Plants 248 3.0399999999999997e-61   NTclustered gi|922575235|gb|JQ921004.1| 40981 g2908 i0 85.259 70.5251798561151 251 26 90 9 4 252 746 987 Dictyochloropsis reticulata 23S large subunit ribosomal RNA gene, partial sequence; and putative LAGLIDADG homing endonuclease genes, complete cds; chloroplast blastn 19606 248 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Symbiochloris Symbiochloris reticulata
2383477 2383477 PRJNA495917_S_NODE_3882_length_250_cov_2.641860_g3688_i0 PRJNA495917 3882 250 2.64186 6.60465 Poaceae 4479 Plants Plants 442 1.1499999999999994e-119   NTclustered gi|1282796720|gb|MG560140.1| 4565 g3688 i0 98.79 1899.692 248 3 100 0 3 250 291613 291366 Triticum aestivum gamma gliadin-A1, gamma gliadin-A3, gamma gliadin-A4, and LMW-A2 genes, complete cds blastn 474923 442 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Triticum Triticum aestivum
2383480 2383480 PRJNA495917_S_NODE_4062_length_246_cov_1.402844_g3868_i0 PRJNA495917 4062 246 1.402844 3.45099624 Triticum 4564 Plants Plants 411 3.1799999999999995e-110   NTclustered gi|1282796720|gb|MG560140.1| 4565 g3868 i0 97.89 680.50406504065 237 5 97 0 3 239 5234461 5234225 Triticum aestivum gamma gliadin-A1, gamma gliadin-A3, gamma gliadin-A4, and LMW-A2 genes, complete cds blastn 167404 414 0.992753623188406 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Triticum Triticum aestivum
2383527 2383527 PRJNA495917_S_NODE_8662_length_183_cov_1.567568_g8468_i0 PRJNA495917 8662 183 1.567568 2.86864944 Chlorophyta 3041 Plants Plants 244 2.4e-60   NTclustered gi|1052423830|gb|KX306824.1| 34157 g8468 i0 90.71 112.868852459016 183 17 100 0 1 183 56972 57154 Gloeotilopsis planctonica chloroplast, complete genome blastn 20655 244 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Ulotrichales Ulotrichaceae Gloeotilopsis Gloeotilopsis planctonica
3028347 3028347 PRJNA495917_S_NODE_103_length_1202_cov_11.205656_g30_i3 PRJNA495917 103 1202 11.205656 134.69198512 Trebouxia lynnae 1825957 Plants Plants 981 0   NTclustered gi|1750939486|gb|MH917293.1| 1825957 g30 i3 87.528 49.7071547420965 882 68 83 23 1 857 18094 17230 Trebouxia sp. TR9 mitochondrion, complete genome blastn 59748 981 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia lynnae
3028348 3028348 PRJNA495917_S_NODE_1043_length_463_cov_339.385514_g851_i0 PRJNA495917 1043 463 339.385514 1571.35492982 Trebouxia lynnae 1825957 Plants Plants 791 0   NTclustered gi|1016111943|gb|KU716051.1| 1825957 g851 i0 99.091 29.6004319654428 440 4 95 0 24 463 7073 6634 Trebouxia lynnae 26S-18S intergenic spacer region, partial sequence; 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 26S ribosomal RNA gene, complete sequence; and 26S-18S rRNA intergenic spacer region, partial sequence blastn 13705 791 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia lynnae
3028354 3028354 PRJNA495917_S_NODE_1063_length_459_cov_6.922170_g871_i0 PRJNA495917 1063 459 6.92217 31.7727603 Chloroidium sp. KL-2023a 3031248 Plants Plants 793 0   NTclustered gi|2450595352|gb|ON986219.1| 3031248 g871 i0 97.821 146.938997821351 459 10 100 0 1 459 220781 220323 Chloroidium sp. KL-2023a clone 2023 chloroplast, complete genome blastn 67445 793 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Watanabeales Watanabeaceae Chloroidium Chloroidium sp. KL-2023a
3028365 3028365 PRJNA495917_S_NODE_11283_length_168_cov_1.744361_g11089_i0 PRJNA495917 11283 168 1.744361 2.93052648 Trebouxia lynnae 1825957 Plants Plants 305 9.81e-79   NTclustered gi|1812100161|ref|NC_045839.1| 1825957 g11089 i0 99.405 30.452380952381 168 1 100 0 1 168 196251 196418 Trebouxia sp. TR9 chloroplast, partial genome blastn 5116 305 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia lynnae
3028374 3028374 PRJNA495917_S_NODE_11563_length_167_cov_1.250000_g11369_i0 PRJNA495917 11563 167 1.25 2.0875 Trebouxia decolorans 300845 Plants Plants 303 3.5e-78   NTclustered gi|677116622|gb|KF549518.1| 300845 g11369 i0 99.401 100.976047904192 167 1 100 0 1 167 13 179 Trebouxia decolorans strain MA2-01a ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, partial cds; chloroplast blastn 16863 303 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia decolorans
3028405 3028405 PRJNA495917_S_NODE_13863_length_158_cov_1.536585_g13669_i0 PRJNA495917 13863 158 1.536585 2.4278043 Trebouxia aggregata 160068 Plants Plants 139 9.74e-29   NTclustered gi|162134245|gb|EU123948.1| 160068 g13669 i0 91.919 0.626582278481013 99 8 63 0 4 102 11817 11719 Trebouxia aggregata strain SAG 219-1d ribosomal protein S2 (rps2) gene, complete cds; tRNA-Met (trnMe(cau)) and large subunit ribosomal RNA (rnl) genes, complete sequence; putative site-specific DNA endonuclease (orf365) gene, complete cds; small subunit ribosomal RNA (rns) and tRNA-Met (trnMf(cau)) genes, complete sequence; cytochrome c oxidase subunit 1 (cox1), putative site-specific DNA endonuclease (orf335), and putative site-specific DNA endonuclease (orf256) genes, complete cds; tRNA-Phe (trnF(gaa)) and tRNA-Lys (trnK(uuu)) genes, complete sequence; and apocytochrome b (cob) and putative site-specific DNA endonuclease (orf334) genes, complete cds; mitochondrial blastn 99 139 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia aggregata
3028461 3028461 PRJNA495917_S_NODE_3163_length_275_cov_28.100000_g2969_i0 PRJNA495917 3163 275 28.1 77.275 Quercus robur 38942 Plants Plants 492 1.26e-134   NTclustered gi|2293049806|ref|XR_007645197.1| 38942 g2969 i0 98.909 100 275 3 100 0 1 275 3394 3120 PREDICTED: Quercus robur 28S ribosomal RNA (LOC126693076), rRNA blastn 27500 492 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fagales Fagaceae Quercus Quercus robur
3028468 3028468 PRJNA495917_S_NODE_3643_length_257_cov_6.603604_g3449_i0 PRJNA495917 3643 257 6.603604 16.97126228 Symbiochloris handae 1853882 Plants Plants 409 1.2e-109   NTclustered gi|745998831|ref|NC_025524.1| 1853882 g3449 i0 95.331 61.2023346303502 257 12 100 0 1 257 3447 3191 Symbiochloris handae culture-collection SAG:2150 chloroplast, complete genome blastn 15729 409 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Symbiochloris Symbiochloris handae
3028509 3028509 PRJNA495917_S_NODE_6803_length_199_cov_2.676829_g6609_i0 PRJNA495917 6803 199 2.676829 5.32688971 Trebouxia aggregata 160068 Plants Plants 115 2.17e-21   NTclustered gi|162134245|gb|EU123948.1| 160068 g6609 i0 78.641 37.6884422110553 206 21 100 16 1 199 14568 14757 Trebouxia aggregata strain SAG 219-1d ribosomal protein S2 (rps2) gene, complete cds; tRNA-Met (trnMe(cau)) and large subunit ribosomal RNA (rnl) genes, complete sequence; putative site-specific DNA endonuclease (orf365) gene, complete cds; small subunit ribosomal RNA (rns) and tRNA-Met (trnMf(cau)) genes, complete sequence; cytochrome c oxidase subunit 1 (cox1), putative site-specific DNA endonuclease (orf335), and putative site-specific DNA endonuclease (orf256) genes, complete cds; tRNA-Phe (trnF(gaa)) and tRNA-Lys (trnK(uuu)) genes, complete sequence; and apocytochrome b (cob) and putative site-specific DNA endonuclease (orf334) genes, complete cds; mitochondrial blastn 7500 115 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia aggregata
3028523 3028523 PRJNA495917_S_NODE_7743_length_191_cov_1.250000_g7549_i0 PRJNA495917 7743 191 1.25 2.3875 Trebouxia sp. SL0000003 3350044 Plants Plants 152 1.57e-32   NTclustered gi|2917929626|emb|OZ234914.1| 3350044 g7549 i0 91.818 2.03141361256545 110 7 58 2 75 184 1365582 1365689 Trebouxia sp. SL0000003 genome assembly, chromosome: 9 blastn 388 152 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. SL0000003
3028530 3028530 PRJNA495917_S_NODE_8403_length_185_cov_1.526667_g8209_i0 PRJNA495917 8403 185 1.526667 2.82433395 Triticum aestivum 4565 Plants Plants 292 8.55e-75   NTclustered gi|300681517|emb|FN564434.1| 4565 g8209 i0 95.187 794.562162162162 187 6 100 3 1 185 388040 388225 Triticum aestivum chromosome 3B-specific BAC library, contig ctg0954b blastn 146994 292 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Triticum Triticum aestivum
3028534 3028534 PRJNA495917_S_NODE_883_length_497_cov_20.004329_g695_i0 PRJNA495917 883 497 20.004329 99.42151513 Chloroidium sp. KL-2023a 3031248 Plants Plants 833 0   NTclustered gi|2450595352|gb|ON986219.1| 3031248 g695 i0 96.982 127.935613682093 497 14 100 1 1 497 221862 221367 Chloroidium sp. KL-2023a clone 2023 chloroplast, complete genome blastn 63584 833 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Watanabeales Watanabeaceae Chloroidium Chloroidium sp. KL-2023a
3658972 3658972 PRJNA495917_S_NODE_10143_length_174_cov_1.223022_g9949_i0 PRJNA495917 10143 174 1.223022 2.12805828 Triticum 4564 Plants Plants 296 6.12e-76   NTclustered gi|1282798539|gb|MG560142.1| 4565 g9949 i0 97.674 586.436781609195 172 4 100 0 1 172 1738051 1737880 Triticum aestivum omega gliadin-D1, omega gliadin-D2, omega gliadin-D3, gamma gliadin-D1, delta gliadin-D1, gamma gliadin-D2, gamma gliadin-D3, gamma gliadin-D4, LMW-D1, LMW-D2, LMW-D3, LMW-D6, and LMW-D7 genes, complete cds blastn 102040 298 0.993288590604027 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Triticum Triticum aestivum
3658998 3658998 PRJNA495917_S_NODE_11823_length_166_cov_1.000000_g11629_i0 PRJNA495917 11823 166 1 1.66 Poaceae 4479 Plants Plants 307 2.69e-79   NTclustered gi|1359931138|gb|MG459162.1| 4565 g11629 i0 100 171.734939759036 166 0 100 0 1 166 82679 82514 Triticum aestivum isolate Dctg4 alpha-gliadin (Gli-D2) gene, complete cds blastn 28508 307 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Triticum Triticum aestivum
3659000 3659000 PRJNA495917_S_NODE_11923_length_165_cov_1.738462_g11729_i0 PRJNA495917 11923 165 1.738462 2.8684623 Aegilops 4480 Plants Plants 294 2.08e-75   NTclustered gi|219814405|gb|FJ436986.1| 37682 g11729 i0 98.788 326.054545454545 165 2 100 0 1 165 100099 99935 Aegilops tauschii Lr34 locus, partial sequence blastn 53799 294 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Aegilops Aegilops tauschii
3659074 3659074 PRJNA495917_S_NODE_2043_length_340_cov_77.547541_g1849_i0 PRJNA495917 2043 340 77.547541 263.6616394 Trebouxia 13786 Plants Plants 623 5.429999999999999e-174   NTclustered gi|189909382|gb|EU725860.1| 13787 g1849 i0 99.706 125.135294117647 340 1 100 0 1 340 359 20 Trebouxia asymmetrica strain SAG 48.88 23S large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast blastn 42546 628 0.99203821656051006 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia asymmetrica
3659106 3659106 PRJNA495917_S_NODE_5363_length_219_cov_1.119565_g5169_i0 PRJNA495917 5363 219 1.119565 2.45184735 Trebouxia 13786 Plants Plants 139 1.45e-28   NTclustered gi|594019471|gb|KF907623.1| 13788 g5169 i0 93.548 14.3424657534247 93 6 42 0 36 128 288 196 Trebouxia impressa voucher Herbarium Tuerk51475 PsbL (psbL) gene, partial cds; and psbL-psbJ intergenic spacer, partial sequence; chloroplast blastn 3141 139 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia impressa
3659107 3659107 PRJNA495917_S_NODE_5403_length_218_cov_2.043716_g5209_i0 PRJNA495917 5403 218 2.043716 4.45530088 Pinus 3337 Plants Plants 403 4.62e-108   NTclustered gi|1878849209|gb|MT796545.1| 3339 g5209 i0 100 105.35779816513799 218 0 100 0 1 218 6561 6344 Pinus contorta isolate DM604 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 22968 403 1 Eukaryota Embryophyta Viridiplantae Streptophyta Pinopsida Pinales Pinaceae Pinus Pinus contorta
3659123 3659123 PRJNA495917_S_NODE_6523_length_202_cov_1.892216_g6329_i0 PRJNA495917 6523 202 1.892216 3.82227632 Poaceae 4479 Plants Plants 342 9.319999999999999e-90   NTclustered gi|1918619120|gb|MT942597.1| 4565 g6329 i0 97.5 834.336633663366 200 5 99 0 1 200 104054 104253 Triticum aestivum isolate Tae-B-4152_ng-50C6 cysteine-rich receptor-like protein kinase, hypothetical protein, and cysteine-rich receptor-like protein kinase (Stb16q) genes, complete cds blastn 168536 342 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Triticum Triticum aestivum
3659162 3659162 PRJNA495917_S_NODE_963_length_480_cov_230.564045_g772_i0 PRJNA495917 963 480 230.564045 1106.707416 Trebouxia 13786 Plants Plants 826 0   NTclustered gi|2105086|emb|Z95380.1| 13787 g772 i0 97.713 91.1729166666667 481 9 100 2 1 480 777 298 T.asymmetrica 26S rRNA gene blastn 43763 826 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia asymmetrica
4304300 4304300 PRJNA495917_S_NODE_1124_length_448_cov_3.830508_g932_i0 PRJNA495917 1124 448 3.830508 17.16067584 Trebouxia sp. SL0000003 3350044 Plants Plants 438 2.849999999999999e-118   NTclustered gi|2917929620|emb|OZ234908.1| 3350044 g932 i0 90.854 0.732142857142857 328 28 73 2 122 448 171913 171587 Trebouxia sp. SL0000003 genome assembly, chromosome: 3 blastn 328 438 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. SL0000003
4304314 4304314 PRJNA495917_S_NODE_1224_length_426_cov_12.283887_g1032_i0 PRJNA495917 1224 426 12.283887 52.32935862 Trebouxia sp. SL0000003 3350044 Plants Plants 370 9.98e-98   NTclustered gi|2917930141|emb|OZ234926.1| 3350044 g1032 i0 97.696 51.0868544600939 217 2 67 1 213 426 110749 110533 Trebouxia sp. SL0000003 genome assembly, organelle: mitochondrion blastn 21763 370 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. SL0000003
4304323 4304323 PRJNA495917_S_NODE_12784_length_162_cov_1.157480_g12590_i0 PRJNA495917 12784 162 1.15748 1.8751176 Triticum monococcum 4568 Plants Plants 289 9.44e-74   NTclustered gi|2581912921|emb|OY737857.1| 4568 g12590 i0 98.765 729.518518518518 162 2 100 0 1 162 51160205 51160044 Triticum monococcum genome assembly, chromosome: UA blastn 118182 289 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Triticum Triticum monococcum
4304342 4304342 PRJNA495917_S_NODE_14464_length_156_cov_1.735537_g14270_i0 PRJNA495917 14464 156 1.735537 2.70743772 Trebouxia aggregata 160068 Plants Plants 267 4.2199999999999997e-67   NTclustered gi|162134245|gb|EU123948.1| 160068 g14270 i0 97.436 1 156 4 100 0 1 156 11438 11283 Trebouxia aggregata strain SAG 219-1d ribosomal protein S2 (rps2) gene, complete cds; tRNA-Met (trnMe(cau)) and large subunit ribosomal RNA (rnl) genes, complete sequence; putative site-specific DNA endonuclease (orf365) gene, complete cds; small subunit ribosomal RNA (rns) and tRNA-Met (trnMf(cau)) genes, complete sequence; cytochrome c oxidase subunit 1 (cox1), putative site-specific DNA endonuclease (orf335), and putative site-specific DNA endonuclease (orf256) genes, complete cds; tRNA-Phe (trnF(gaa)) and tRNA-Lys (trnK(uuu)) genes, complete sequence; and apocytochrome b (cob) and putative site-specific DNA endonuclease (orf334) genes, complete cds; mitochondrial blastn 156 267 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia aggregata
4304351 4304351 PRJNA495917_S_NODE_14944_length_155_cov_1.333333_g14750_i0 PRJNA495917 14944 155 1.333333 2.06666615 Trebouxia aggregata 160068 Plants Plants 287 3.21e-73   NTclustered gi|162134321|gb|EU123975.1| 160068 g14750 i0 100 7.25806451612903 155 0 100 0 1 155 5204 5050 Trebouxia aggregata strain SAG 219-1d P700 apoprotein A1 of photosystem I (psaA), P700 apoprotein A2 of photosystem I (psaB), and hypothetical protein (orf262) genes, complete cds; chloroplast blastn 1125 287 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia aggregata
4304403 4304403 PRJNA495917_S_NODE_3584_length_259_cov_23.218750_g3390_i0 PRJNA495917 3584 259 23.21875 60.1365625 uncultured Symbiochloris 2562465 Plants Plants 331 2.71e-86   NTclustered gi|2509725906|gb|OR042192.1| 2562465 g3390 i0 89.922 99.7992277992278 258 25 99 1 1 258 942 1198 Uncultured Symbiochloris clone BW01 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 25848 331 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae       uncultured Symbiochloris
4304410 4304410 PRJNA495917_S_NODE_4204_length_242_cov_2.444444_g4010_i0 PRJNA495917 4204 242 2.444444 5.91555448 Trebouxia aggregata 160068 Plants Plants 431 2.4e-116   NTclustered gi|162134283|gb|EU123964.1| 160068 g4010 i0 98.76 56.1198347107438 242 3 100 0 1 242 10673 10914 Trebouxia aggregata strain SAG 219-1d CP47 chlorophyll apoprotein of photosystem II (psbB), putative site-specific DNA endonuclease (orf294), T protein of photosystem II (psbT), N protein of photosystem II (psbN), 10 KDa phosphoprotein of photosystem II (psbH), proteolytic subunit 2 of clp protease (clpP), and Z protein of photosystem II (psbZ) genes, complete cds; chloroplast blastn 13581 431 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia aggregata
4936041 4936041 PRJNA495917_S_NODE_1104_length_451_cov_186.774038_g912_i0 PRJNA495917 1104 451 186.774038 842.35091138 Trebouxia 13786 Plants Plants 761 0   NTclustered gi|21631|emb|Z21553.1| 13787 g912 i0 97.327 99.589800443459 449 11 99 1 3 451 1048 601 T.asymmetrica gene encoding 18S ribosomal RNA blastn 44915 767 0.992177314211212 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia asymmetrica
4936126 4936126 PRJNA495917_S_NODE_2164_length_330_cov_150.528814_g1970_i0 PRJNA495917 2164 330 150.528814 496.7450862 Trebouxia 13786 Plants Plants 556 5.3999999999999985e-154   NTclustered gi|1996832142|gb|MW694999.1| 53268 g1970 i0 96.988 100.387878787879 332 8 100 2 1 330 625 294 Trebouxia arboricola voucher CZ-Malicek6505 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence blastn 33128 556 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia arboricola
4936134 4936134 PRJNA495917_S_NODE_3644_length_257_cov_6.211712_g3450_i0 PRJNA495917 3644 257 6.211712 15.96409984 Magnoliopsida 3398 Plants Plants 464 2.5299999999999998e-126   NTclustered gi|1693305072|ref|NC_042949.1| 437623 g3450 i0 99.222 197 257 2 100 0 1 257 9452 9196 Cuscuta boldinghii voucher SS-16-49 plastid, complete genome blastn 50629 464 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Solanales Convolvulaceae Cuscuta Cuscuta boldinghii
5581014 5581014 PRJNA495917_S_NODE_12945_length_161_cov_1.833333_g12751_i0 PRJNA495917 12945 161 1.833333 2.95166613 Triticum aestivum 4565 Plants Plants 298 1.56e-76   NTclustered gi|478246249|emb|HF541873.1| 4565 g12751 i0 100 253.372670807453 161 0 100 0 1 161 168120 167960 Triticum aestivum chromosome 3B specific BAC library, BAC clone TaaCsp3BFhA_0111F24 blastn 40793 298 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Triticum Triticum aestivum
5581047 5581047 PRJNA495917_S_NODE_1485_length_390_cov_29.977465_g1291_i0 PRJNA495917 1485 390 29.977465 116.9121135 Stichococcus bacillaris 37433 Plants Plants 518 3.06e-142   NTclustered gi|371782093|emb|HE610125.1| 37433 g1291 i0 90.816 100.605128205128 392 29 100 6 1 390 4739 4353 Stichococcus bacillaris 18S rRNA gene (partial), 5.8S rRNA gene, 28S rRNA gene (partial), ITS1 and ITS2, strain SAG 379-2 blastn 39236 518 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Prasiolales Stichococcaceae Stichococcus Stichococcus bacillaris
5581054 5581054 PRJNA495917_S_NODE_15665_length_153_cov_1.067797_g15471_i0 PRJNA495917 15665 153 1.067797 1.63372941 Chloroidium sp. UTEX 3077 2686440 Plants Plants 233 4.17e-57   NTclustered gi|1785188440|gb|MN646686.1| 2686440 g15471 i0 94.118 1.96732026143791 153 9 100 0 1 153 54231 54383 Chloroidium sp. UTEX 3077 mitochondrion, complete genome blastn 301 233 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Watanabeales Watanabeaceae Chloroidium Chloroidium sp. UTEX 3077
5581078 5581078 PRJNA495917_S_NODE_2085_length_337_cov_39.546358_g1891_i0 PRJNA495917 2085 337 39.546358 133.27122646 Symbiochloris symbiontica 531392 Plants Plants 507 5.65e-139   NTclustered gi|922575251|gb|JQ921011.1| 531392 g1891 i0 93.769 129.228486646884 337 21 100 0 1 337 128 464 Dictyochloropsis symbiontica strain SAG 27.81 23S large subunit ribosomal RNA gene, partial sequence; chloroplast blastn 43550 507 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Symbiochloris Symbiochloris symbiontica
5581083 5581083 PRJNA495917_S_NODE_2585_length_304_cov_1.899628_g2391_i0 PRJNA495917 2585 304 1.899628 5.77486912 Trebouxia sp. SL0000003 3350044 Plants Plants 108 5.96e-19   NTclustered gi|2917929626|emb|OZ234914.1| 3350044 g2391 i0 95.522 0.430921052631579 67 3 22 0 134 200 1022621 1022555 Trebouxia sp. SL0000003 genome assembly, chromosome: 9 blastn 131 108 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. SL0000003
5581116 5581116 PRJNA495917_S_NODE_5725_length_213_cov_1.112360_g5531_i0 PRJNA495917 5725 213 1.11236 2.3693268 Trebouxia sp. SL0000003 3350044 Plants Plants 220 4.86e-53   NTclustered gi|2917929621|emb|OZ234909.1| 3350044 g5531 i0 93.289 0.699530516431925 149 10 70 0 6 154 1267112 1266964 Trebouxia sp. SL0000003 genome assembly, chromosome: 4 blastn 149 220 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. SL0000003
5581148 5581148 PRJNA495917_S_NODE_7745_length_191_cov_1.051282_g7551_i0 PRJNA495917 7745 191 1.051282 2.00794862 Trebouxia aggregata 160068 Plants Plants 348 1.87e-91   NTclustered gi|162134321|gb|EU123975.1| 160068 g7551 i0 99.476 81.2146596858639 191 1 100 0 1 191 5510 5700 Trebouxia aggregata strain SAG 219-1d P700 apoprotein A1 of photosystem I (psaA), P700 apoprotein A2 of photosystem I (psaB), and hypothetical protein (orf262) genes, complete cds; chloroplast blastn 15512 348 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia aggregata
5581166 5581166 PRJNA495917_S_NODE_8965_length_181_cov_1.479452_g8771_i0 PRJNA495917 8965 181 1.479452 2.67780812 Trebouxia sp. SL0000003 3350044 Plants Plants 121 4.159999999999999e-23   NTclustered gi|2917929695|emb|OZ234922.1| 3350044 g8771 i0 85.47 0.646408839779006 117 16 64 1 54 169 1175000 1174884 Trebouxia sp. SL0000003 genome assembly, chromosome: 17 blastn 117 121 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. SL0000003
5581173 5581173 PRJNA495917_S_NODE_9225_length_179_cov_2.430556_g9031_i0 PRJNA495917 9225 179 2.430556 4.35069524 Trebouxia aggregata 160068 Plants Plants 159 8.689999999999998e-35   NTclustered gi|162134245|gb|EU123948.1| 160068 g9031 i0 91.379 5.45810055865922 116 10 65 0 1 116 42 157 Trebouxia aggregata strain SAG 219-1d ribosomal protein S2 (rps2) gene, complete cds; tRNA-Met (trnMe(cau)) and large subunit ribosomal RNA (rnl) genes, complete sequence; putative site-specific DNA endonuclease (orf365) gene, complete cds; small subunit ribosomal RNA (rns) and tRNA-Met (trnMf(cau)) genes, complete sequence; cytochrome c oxidase subunit 1 (cox1), putative site-specific DNA endonuclease (orf335), and putative site-specific DNA endonuclease (orf256) genes, complete cds; tRNA-Phe (trnF(gaa)) and tRNA-Lys (trnK(uuu)) genes, complete sequence; and apocytochrome b (cob) and putative site-specific DNA endonuclease (orf334) genes, complete cds; mitochondrial blastn 977 159 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia aggregata
6211344 6211344 PRJNA495917_S_NODE_2165_length_330_cov_143.871186_g1971_i0 PRJNA495917 2165 330 143.871186 474.7749138 Trebouxia 13786 Plants Plants 593 4.119999999999999e-165   NTclustered gi|847144372|gb|KR913248.1| 1660976 g1971 i0 99.094 100.530303030303 331 2 100 1 1 330 49 379 Trebouxia sp. OTU A20 voucher DNA ID 147 (F) internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence blastn 33175 593 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. OTU A20
6211347 6211347 PRJNA495917_S_NODE_2405_length_314_cov_9.598566_g2211_i0 PRJNA495917 2405 314 9.598566 30.13949724 Symbiochloris 1853743 Plants Plants 246 1.26e-60   NTclustered gi|1802907771|gb|MT006192.1| 2704658 g2211 i0 84.861 33.515923566879 251 31 79 5 1 247 2682 2929 Symbiochloris ficusa strain FACHB-2403 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 10524 246 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Symbiochloris Symbiochloris ficusa
6211369 6211369 PRJNA495917_S_NODE_445_length_674_cov_88.516432_g308_i0 PRJNA495917 445 674 88.516432 596.60075168 Trebouxia 13786 Plants Plants 1201 0   NTclustered gi|189909382|gb|EU725860.1| 13787 g308 i0 98.813 98.6617210682493 674 8 100 0 1 674 303 976 Trebouxia asymmetrica strain SAG 48.88 23S large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast blastn 66498 1201 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia asymmetrica
6211380 6211380 PRJNA495917_S_NODE_5505_length_216_cov_5.132597_g5311_i0 PRJNA495917 5505 216 5.132597 11.08640952 Musa 4640 Plants Plants 394 2.75e-105   NTclustered gi|2046373213|dbj|LC610764.1| 4641 g5311 i0 99.539 126.458333333333 217 0 100 1 1 216 3372 3588 Musa acuminata cv. Pei Chiao genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA, complete sequence blastn 27315 394 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Zingiberales Musaceae Musa Musa acuminata
6855046 6855046 PRJNA495917_S_NODE_11486_length_167_cov_1.962121_g11292_i0 PRJNA495917 11486 167 1.962121 3.27674207 Brassica rapa 3711 Plants Plants 182 1.71e-41   NTclustered gi|1516499363|emb|LR031568.1| 3711 g11292 i0 90.511 82.7904191616767 137 13 82 0 31 167 56036823 56036687 Brassica rapa genome, scaffold: A09 blastn 13826 182 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Brassicales Brassicaceae Brassica Brassica rapa
6855052 6855052 PRJNA495917_S_NODE_11786_length_166_cov_1.221374_g11592_i0 PRJNA495917 11786 166 1.221374 2.02748084 Trebouxia aggregata 160068 Plants Plants 307 2.69e-79   NTclustered gi|162134283|gb|EU123964.1| 160068 g11592 i0 100 47.5180722891566 166 0 100 0 1 166 4788 4623 Trebouxia aggregata strain SAG 219-1d CP47 chlorophyll apoprotein of photosystem II (psbB), putative site-specific DNA endonuclease (orf294), T protein of photosystem II (psbT), N protein of photosystem II (psbN), 10 KDa phosphoprotein of photosystem II (psbH), proteolytic subunit 2 of clp protease (clpP), and Z protein of photosystem II (psbZ) genes, complete cds; chloroplast blastn 7888 307 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia aggregata
6855078 6855078 PRJNA495917_S_NODE_13426_length_159_cov_5.000000_g13232_i0 PRJNA495917 13426 159 5 7.95 Trebouxia lynnae 1825957 Plants Plants 62.1 2.19e-5   NTclustered gi|1016111943|gb|KU716051.1| 1825957 g13232 i0 95 0.60377358490566 40 1 25 1 120 159 820 858 Trebouxia lynnae 26S-18S intergenic spacer region, partial sequence; 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 26S ribosomal RNA gene, complete sequence; and 26S-18S rRNA intergenic spacer region, partial sequence blastn 96 62.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia lynnae
6855137 6855137 PRJNA495917_S_NODE_2046_length_340_cov_43.095082_g1852_i0 PRJNA495917 2046 340 43.095082 146.52327880000001 Symbiochloris handae 1853882 Plants Plants 527 4.3799999999999985e-145   NTclustered gi|745998831|ref|NC_025524.1| 1853882 g1852 i0 94.318 122.252941176471 352 7 100 2 1 340 4153 4503 Symbiochloris handae culture-collection SAG:2150 chloroplast, complete genome blastn 41566 527 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Symbiochloris Symbiochloris handae
6855140 6855140 PRJNA495917_S_NODE_2286_length_321_cov_54.986014_g2092_i0 PRJNA495917 2286 321 54.986014 176.50510494 Oryza sativa 4530 Plants Plants 377 4.37e-100   NTclustered gi|32994295|dbj|AK109086.1| 39947 g2092 i0 87.963 248.641744548287 324 33 100 6 1 321 525 205 Oryza sativa Japonica Group cDNA clone:002-154-H10, full insert sequence blastn 79814 377 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Oryza Oryza sativa
6855149 6855149 PRJNA495917_S_NODE_3126_length_277_cov_14.181818_g2932_i0 PRJNA495917 3126 277 14.181818 39.28363586 Symbiochloris handae 1853882 Plants Plants 481 2.74e-131   NTclustered gi|745998831|ref|NC_025524.1| 1853882 g2932 i0 98.182 132.494584837545 275 5 99 0 3 277 3742 4016 Symbiochloris handae culture-collection SAG:2150 chloroplast, complete genome blastn 36701 481 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Symbiochloris Symbiochloris handae
6855164 6855164 PRJNA495917_S_NODE_4546_length_234_cov_1.869347_g4352_i0 PRJNA495917 4546 234 1.869347 4.37427198 Trebouxia sp. SL0000003 3350044 Plants Plants 183 7.119999999999998e-42   NTclustered gi|2917929628|emb|OZ234916.1| 3350044 g4352 i0 94.167 3.88034188034188 120 7 51 0 1 120 2609398 2609279 Trebouxia sp. SL0000003 genome assembly, chromosome: 11 blastn 908 183 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. SL0000003
6855174 6855174 PRJNA495917_S_NODE_506_length_643_cov_12.389803_g350_i0 PRJNA495917 506 643 12.389803 79.66643329 Trebouxia aggregata 160068 Plants Plants 929 0   NTclustered gi|162134245|gb|EU123948.1| 160068 g350 i0 95.385 45.099533437014 585 25 91 2 59 643 15785 16367 Trebouxia aggregata strain SAG 219-1d ribosomal protein S2 (rps2) gene, complete cds; tRNA-Met (trnMe(cau)) and large subunit ribosomal RNA (rnl) genes, complete sequence; putative site-specific DNA endonuclease (orf365) gene, complete cds; small subunit ribosomal RNA (rns) and tRNA-Met (trnMf(cau)) genes, complete sequence; cytochrome c oxidase subunit 1 (cox1), putative site-specific DNA endonuclease (orf335), and putative site-specific DNA endonuclease (orf256) genes, complete cds; tRNA-Phe (trnF(gaa)) and tRNA-Lys (trnK(uuu)) genes, complete sequence; and apocytochrome b (cob) and putative site-specific DNA endonuclease (orf334) genes, complete cds; mitochondrial blastn 28999 929 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia aggregata
6855181 6855181 PRJNA495917_S_NODE_5426_length_217_cov_16.967033_g5232_i0 PRJNA495917 5426 217 16.967033 36.81846161 Trebouxia sp. SL0000003 3350044 Plants Plants 318 1.71e-82   NTclustered gi|2917929622|emb|OZ234910.1| 3350044 g5232 i0 94.231 1.91705069124424 208 12 96 0 10 217 961958 962165 Trebouxia sp. SL0000003 genome assembly, chromosome: 5 blastn 416 318 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. SL0000003
6855197 6855197 PRJNA495917_S_NODE_6506_length_202_cov_2.437126_g6312_i0 PRJNA495917 6506 202 2.437126 4.92299452 Trebouxia aggregata 160068 Plants Plants 278 2.67e-70   NTclustered gi|162134316|gb|EU123974.1| 160068 g6312 i0 97.531 47.019801980198 162 4 80 0 1 162 3960 4121 Trebouxia aggregata strain SAG 219-1d D2 reaction center protein of photosystem II (psbD), CP43 chlorophyll apoprotein of photosystem II (psbC), apocytochrome b6 of cytochrome b6/f complex (petB), and subunit IV of cytochrome b6/f complex (petD) genes, complete cds; chloroplast blastn 9498 278 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia aggregata
6855230 6855230 PRJNA495917_S_NODE_8706_length_183_cov_1.108108_g8512_i0 PRJNA495917 8706 183 1.108108 2.02783764 Triticum aestivum 4565 Plants Plants 309 8.38e-80   NTclustered gi|300681497|emb|FN564431.1| 4565 g8512 i0 97.268 257.51912568306 183 4 100 1 1 183 319462 319643 Triticum aestivum chromosome 3B-specific BAC library, contig ctg0528b blastn 47126 309 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Triticum Triticum aestivum
7485993 7485993 PRJNA495917_S_NODE_4386_length_237_cov_16.272277_g4192_i0 PRJNA495917 4386 237 16.272277 38.56529649 Chloroidium 1034479 Plants Plants 438 1.4e-118   NTclustered gi|1802907788|gb|MT006209.1| 2704674 g4192 i0 100 99.4388185654009 237 0 100 0 1 237 4008 4244 Chloroidium sp. FACHB-2420 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 23567 438 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Watanabeales Watanabeaceae Chloroidium Chloroidium sp. FACHB-2420
7485995 7485995 PRJNA495917_S_NODE_446_length_674_cov_76.527387_g309_i0 PRJNA495917 446 674 76.527387 515.79458838 Trebouxia 13786 Plants Plants 1162 0   NTclustered gi|189909382|gb|EU725860.1| 13787 g309 i0 97.774 98.6454005934718 674 15 100 0 1 674 303 976 Trebouxia asymmetrica strain SAG 48.88 23S large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast blastn 66487 1162 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia asymmetrica
7486031 7486031 PRJNA495917_S_NODE_7866_length_189_cov_4.954545_g7672_i0 PRJNA495917 7866 189 4.954545 9.36409005 Pinaceae 3318 Plants Plants 344 2.39e-90   NTclustered gi|121308535|dbj|AB026942.1| 66173 g7672 i0 100 101.904761904762 186 0 98 0 1 186 659 844 Tsuga canadensis gene for 18S ribosomal RNA, partial sequence blastn 19260 344 1 Eukaryota Embryophyta Viridiplantae Streptophyta Pinopsida Pinales Pinaceae Tsuga Tsuga canadensis
8130510 8130510 PRJNA495917_S_NODE_1207_length_430_cov_121.306329_g1015_i0 PRJNA495917 1207 430 121.306329 521.6172147 uncultured Symbiochloris 2562465 Plants Plants 717 0   NTclustered gi|1604999872|gb|MH807082.1| 2562465 g1015 i0 96.963 99.693023255814 428 12 99 1 1 428 603 1029 Uncultured Symbiochloris clone SWM_0cmW_K142 18S ribosomal RNA gene, partial sequence blastn 42868 717 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae       uncultured Symbiochloris
8130586 8130586 PRJNA495917_S_NODE_2167_length_330_cov_19.932203_g1973_i0 PRJNA495917 2167 330 19.932203 65.7762699 Symbiochloris handae 1853882 Plants Plants 516 9.17e-142   NTclustered gi|745998831|ref|NC_025524.1| 1853882 g1973 i0 96.203 103.663636363636 316 10 95 2 13 327 8333 8019 Symbiochloris handae culture-collection SAG:2150 chloroplast, complete genome blastn 34209 516 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Symbiochloris Symbiochloris handae
8130598 8130598 PRJNA495917_S_NODE_3267_length_271_cov_84.423729_g3073_i0 PRJNA495917 3267 271 84.423729 228.78830559 Luculia yunnanensis 1043446 Plants Plants 52.8 0.025   NTclustered gi|363453795|gb|JN871303.1| 1043446 g3073 i0 96.774 0.114391143911439 31 1 11 0 39 69 59 89 Luculia yunnanensis clone MH8 microsatellite sequence blastn 31 52.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Gentianales Rubiaceae Luculia Luculia yunnanensis
8760822 8760822 PRJNA495917_S_NODE_1247_length_423_cov_45.113402_g1055_i0 PRJNA495917 1247 423 45.113402 190.82969046 Trebouxia 13786 Plants Plants 590 6.979999999999999e-164   NTclustered gi|2019600809|gb|MT458608.2| 1740237 g1055 i0 94.315 147.787234042553 387 19 91 2 1 385 155 540 Trebouxia cretacea isolate Fuerteventura large subunit ribosomal RNA gene, partial sequence; chloroplast blastn 62514 590 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia cretacea
8760824 8760824 PRJNA495917_S_NODE_12627_length_162_cov_1.984252_g12433_i0 PRJNA495917 12627 162 1.984252 3.21448824 Triticum 4564 Plants Plants 272 9.51e-69   NTclustered gi|1353861176|gb|MG582649.1| 4568 g12433 i0 96.914 1215.09259259259 162 5 100 0 1 162 244658 244819 Triticum monococcum nucleolin 2-like protein gene, complete cds; retrotransposon WIS_Sr21-1, complete sequence; Sr21 (Sr21) gene, complete cds; retrotransposons Angela_Sr21-1 and Yvonne_Sr21-1, cnl2 pseudogene, transposon Caspar_Sr21-1, retrotransposons Gujog_Sr21-1, Angela_Sr21-2, WIS_Sr21-2, Laura_Sr21-1, WIS_Sr21-3, Angela_Sr21-3, and WHAM_Sr21-1 and transposon Kong_Sr21-1, complete sequence; CNL3 (CNL3) gene, complete cds; retrotransposon Angela_Sr21-4, transposon Jude_Sr21-1, retrotransposons Yvonne_Sr21-2 and Angela_Sr21-5, cnl4 pseudogene, transposon Caspar_Sr21-2, retrotransposons Fatima_Sr21-1, Abia_Sr21-1, Angela_Sr21-6, Fatima_Sr21-2, Nusif_Sr21-1, Danae_Sr21-1, WIS_Sr21-4, and WIS_Sr21-5, transposon Kong_Sr21-2, and retrotransposon WHAM_Sr21-2, complete sequence; CNL5 (CNL5) gene, complete cds; retrotransposon Laura_Sr21-2, transposon Clifford_Sr21-1, retrotransposons WHAM_Sr21-3, Angela_Sr21-7, Daniela_Sr21-2, Lila_Sr21-1, WIS_Sr21-6, Sumaya_Sr21-1, and Angela_Sr21-8, complete sequence; CNL6 (CNL6) gene, complete cds; and cnl7 pseudogene and transposon Hamlet_Sr21-1, complete sequence blastn 196845 272 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Triticum Triticum monococcum
8760852 8760852 PRJNA495917_S_NODE_1447_length_394_cov_17.323120_g1253_i0 PRJNA495917 1447 394 17.32312 68.2530928 Liquidambar 4398 Plants Plants 708 0   NTclustered gi|9799452|gb|AF274654.1| 4400 g1253 i0 98.985 100.01269035533 394 4 100 0 1 394 269 662 Liquidambar styraciflua 26S ribosomal RNA gene, complete sequence blastn 39405 708 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Saxifragales Altingiaceae Liquidambar Liquidambar styraciflua
8760905 8760905 PRJNA495917_S_NODE_4367_length_238_cov_1.842365_g4173_i0 PRJNA495917 4367 238 1.842365 4.3848287 Trebouxiophyceae 75966 Plants Plants 115 2.69e-21   NTclustered gi|2724824530|gb|PP746562.1| 33092 g4173 i0 84.746 6.34453781512605 118 15 49 3 65 181 1981 2096 Koliella longiseta culture UTEX:339 mitochondrion, complete genome blastn 1510 115 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Prasiolales Koliellaceae Koliella Koliella longiseta
8760914 8760914 PRJNA495917_S_NODE_5427_length_217_cov_13.428571_g5233_i0 PRJNA495917 5427 217 13.428571 29.13999907 Chloroidium 1034479 Plants Plants 396 7.689999999999997e-106   NTclustered gi|1802907788|gb|MT006209.1| 2704674 g5233 i0 99.539 85.073732718894 217 1 100 0 1 217 4272 4488 Chloroidium sp. FACHB-2420 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 18461 396 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Watanabeales Watanabeaceae Chloroidium Chloroidium sp. FACHB-2420
8760927 8760927 PRJNA495917_S_NODE_7087_length_196_cov_16.124224_g6893_i0 PRJNA495917 7087 196 16.124224 31.60347904 Coccomyxa 41891 Plants Plants 250 5.6e-62   NTclustered gi|1360638129|gb|AC277064.1| 574566 g6893 i0 89.796 100.183673469388 196 19 100 1 1 196 1525 1719 Coccomyxa subellipsoidea C-169 clone FAHX137-B20, complete sequence blastn 19636 250 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
8760945 8760945 PRJNA495917_S_NODE_827_length_514_cov_128.615866_g643_i0 PRJNA495917 827 514 128.615866 661.08555124 Trebouxia 13786 Plants Plants 915 0   NTclustered gi|49781197|gb|AY648107.1| 283661 g643 i0 98.649 100.429961089494 518 3 100 3 1 514 899 1416 Trebouxia sp. Wei 22-c 26S ribosomal RNA gene, partial sequence blastn 51621 915 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. Wei 22-c
9405330 9405330 PRJNA495917_S_NODE_1028_length_466_cov_8.686775_g836_i0 PRJNA495917 1028 466 8.686775 40.4803715 Trebouxia aggregata 160068 Plants Plants 612 1.66e-170   NTclustered gi|162134245|gb|EU123948.1| 160068 g836 i0 90.678 156.195278969957 472 26 98 7 1 457 5668 6136 Trebouxia aggregata strain SAG 219-1d ribosomal protein S2 (rps2) gene, complete cds; tRNA-Met (trnMe(cau)) and large subunit ribosomal RNA (rnl) genes, complete sequence; putative site-specific DNA endonuclease (orf365) gene, complete cds; small subunit ribosomal RNA (rns) and tRNA-Met (trnMf(cau)) genes, complete sequence; cytochrome c oxidase subunit 1 (cox1), putative site-specific DNA endonuclease (orf335), and putative site-specific DNA endonuclease (orf256) genes, complete cds; tRNA-Phe (trnF(gaa)) and tRNA-Lys (trnK(uuu)) genes, complete sequence; and apocytochrome b (cob) and putative site-specific DNA endonuclease (orf334) genes, complete cds; mitochondrial blastn 72787 612 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia aggregata
9405402 9405402 PRJNA495917_S_NODE_14208_length_157_cov_1.409836_g14014_i0 PRJNA495917 14208 157 1.409836 2.21344252 Trebouxia aggregata 160068 Plants Plants 285 1.17e-72   NTclustered gi|162134283|gb|EU123964.1| 160068 g14014 i0 99.363 14.0955414012739 157 1 100 0 1 157 4758 4914 Trebouxia aggregata strain SAG 219-1d CP47 chlorophyll apoprotein of photosystem II (psbB), putative site-specific DNA endonuclease (orf294), T protein of photosystem II (psbT), N protein of photosystem II (psbN), 10 KDa phosphoprotein of photosystem II (psbH), proteolytic subunit 2 of clp protease (clpP), and Z protein of photosystem II (psbZ) genes, complete cds; chloroplast blastn 2213 285 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia aggregata
9405459 9405459 PRJNA495917_S_NODE_2688_length_298_cov_2.353612_g2494_i0 PRJNA495917 2688 298 2.353612 7.01376376 Trebouxia aggregata 160068 Plants Plants 534 2.26e-147   NTclustered gi|162134316|gb|EU123974.1| 160068 g2494 i0 98.993 100.006711409396 298 3 100 0 1 298 1585 1288 Trebouxia aggregata strain SAG 219-1d D2 reaction center protein of photosystem II (psbD), CP43 chlorophyll apoprotein of photosystem II (psbC), apocytochrome b6 of cytochrome b6/f complex (petB), and subunit IV of cytochrome b6/f complex (petD) genes, complete cds; chloroplast blastn 29802 534 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia aggregata
9405559 9405559 PRJNA495917_S_NODE_968_length_478_cov_101.713318_g777_i0 PRJNA495917 968 478 101.713318 486.18966004 Trebouxia sp. C18 2884543 Plants Plants 793 0   NTclustered gi|22022955|emb|AJ431583.1| 2884543 g777 i0 96.646 96.0941422594142 477 16 99 0 2 478 1 477 Trebouxia sp. C-18 18S rRNA gene (partial), 5.8S rRNA gene, 26S rRNA gene (partial), internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2), strain C(18) blastn 45933 793 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. C18
10036394 10036394 PRJNA495917_S_NODE_1328_length_409_cov_156.799465_g1134_i0 PRJNA495917 1328 409 156.799465 641.30981185 Trebouxia 13786 Plants Plants 575 1.8799999999999994e-159   NTclustered gi|1273623725|gb|KY033354.1| 285713 g1134 i0 91.971 100.623471882641 411 31 100 2 1 409 6406 6816 Uncultured Trebouxia photobiont voucher Lendemer 46119 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 41155 575 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia uncultured Trebouxia photobiont
10036419 10036419 PRJNA495917_S_NODE_15628_length_153_cov_1.338983_g15434_i0 PRJNA495917 15628 153 1.338983 2.04864399 Triticum 4564 Plants Plants 267 4.1099999999999994e-67   NTclustered gi|1282798539|gb|MG560142.1| 4565 g15434 i0 98.667 384.745098039216 150 2 100 0 4 153 1191587 1191438 Triticum aestivum omega gliadin-D1, omega gliadin-D2, omega gliadin-D3, gamma gliadin-D1, delta gliadin-D1, gamma gliadin-D2, gamma gliadin-D3, gamma gliadin-D4, LMW-D1, LMW-D2, LMW-D3, LMW-D6, and LMW-D7 genes, complete cds blastn 58866 267 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Triticum Triticum aestivum
10036425 10036425 PRJNA495917_S_NODE_16128_length_152_cov_0.991453_g15934_i0 PRJNA495917 16128 152 0.991453 1.50700856 Triticum 4564 Plants Plants 259 6.82e-65   NTclustered gi|15088543|gb|AF326781.1| 4568 g15934 i0 97.368 117.072368421053 152 4 100 0 1 152 208068 207917 Triticum monococcum actin (ACT-1) gene, partial cds; putative chromosome condensation factor (CCF), putative resistance protein (RGA-2), putative resistance protein (RGA2) and putative nodulin-like-like protein (NLL) gene, complete cds; and retrotransposons Josephine, Angela-2, Angela-4, Heidi, Greti, Angela-3, Fatima, Erika-1, Angela-6, Angela-5, Barbara, Isabelle, Erika-2, and Claudia blastn 17795 259 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Triticum Triticum monococcum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;