RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA495917" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA495917 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
477488 477488 PRJNA495917_S_NODE_13181_length_160_cov_2.752000_g12987_i0 PRJNA495917 13181 160 2.752 4.4032 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 291 2.5799999999999998e-74   NTclustered gi|1474570736|gb|CP023991.1| 2026720 g12987 i0 99.375 62.55 160 1 100 0 1 160 884388 884229 Candidatus Saccharibacteria bacterium isolate CG19_WC_8_21_14_NA_150_51_44 chromosome, complete genome blastn 10008 291 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
477566 477566 PRJNA495917_S_NODE_4881_length_227_cov_2.578125_g4687_i0 PRJNA495917 4881 227 2.578125 5.85234375 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 357 3.83e-94   NTclustered gi|1474570736|gb|CP023991.1| 2026720 g4687 i0 95.154 107.20704845815 227 9 99 2 1 226 885427 885202 Candidatus Saccharibacteria bacterium isolate CG19_WC_8_21_14_NA_150_51_44 chromosome, complete genome blastn 24336 357 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
477609 477609 PRJNA495917_S_NODE_8101_length_187_cov_3.118421_g7907_i0 PRJNA495917 8101 187 3.118421 5.83144727 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 335 1.4199999999999996e-87   NTclustered gi|1474570736|gb|CP023991.1| 2026720 g7907 i0 98.93 65.1604278074866 187 2 100 0 1 187 882674 882860 Candidatus Saccharibacteria bacterium isolate CG19_WC_8_21_14_NA_150_51_44 chromosome, complete genome blastn 12185 335 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;