RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA495391" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA495391 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4303219 4303219 PRJNA495391_S_NODE_35864_length_204_cov_1.248521_g34812_i0 PRJNA495391 35864 204 1.248521 2.54698284 Mucor velutinosus 708070 Fungi Fungi 355 1.21e-93   NTclustered gi|2724886901|ref|XM_064831124.1| 708070 g34812 i0 98.039 16.6421568627451 204 4 100 0 1 204 295 92 Mucor velutinosus uncharacterized protein (ATC70_011941), partial mRNA blastn 3395 355 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor velutinosus
8129713 8129713 PRJNA495391_S_NODE_47307_length_179_cov_2.173611_g46255_i0 PRJNA495391 47307 179 2.173611 3.89076369 Mucor velutinosus 708070 Fungi Fungi 121 4.0999999999999997e-23   NTclustered gi|2724942617|ref|XM_064822931.1| 708070 g46255 i0 87.037 0.603351955307263 108 12 59 1 74 179 1437 1330 Mucor velutinosus uncharacterized protein (ATC70_003574), partial mRNA blastn 108 121 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor velutinosus
17684828 17684828 PRJNA495391_S_NODE_15974_length_299_cov_11.439394_g14922_i0 PRJNA495391 15974 299 11.439394 34.20378806 Fungi 4751 Fungi Fungi 472 1.8e-128   NTclustered gi|658131632|emb|HF968958.1| 4874 g14922 i0 98.148 135.782608695652 270 5 90 0 12 281 2266 1997 Gigaspora margarita partial 28S rRNA gene, strain BEG34, isolate spore 4, clone BL2_6_26 blastn 40599 472 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Diversisporales Gigasporaceae Gigaspora Gigaspora margarita

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;