RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA495391" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA495391 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
475847 475847 PRJNA495391_S_NODE_1421_length_1299_cov_2721.225475_g665_i0 PRJNA495391 1421 1299 2721.225475 35348.71892025 Trachyphyllia geoffroyi 196280 Cnidaria other_Eukaryota 1251 0   NTclustered gi|23503507|dbj|AB085641.1| 196280 g665 i0 100 44.5696689761355 677 0 52 0 552 1228 677 1 Trachyphyllia geoffroyi mRNA for Kaede, complete cds blastn 57896 1251 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Merulinidae Trachyphyllia Trachyphyllia geoffroyi
1752141 1752141 PRJNA495391_S_NODE_68022_length_153_cov_1.347458_g66970_i0 PRJNA495391 68022 153 1.347458 2.06161074 Hydra vulgaris 6087 Cnidaria other_Eukaryota 150 4.3199999999999996e-32   NTclustered gi|2744890083|ref|XR_010641937.1| 6087 g66970 i0 84.314 1 153 24 100 0 1 153 73 225 PREDICTED: Hydra vulgaris uncharacterized LOC136087622 (LOC136087622), transcript variant X1, ncRNA blastn 153 150 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydridae Hydra Hydra vulgaris
3027747 3027747 PRJNA495391_S_NODE_52503_length_171_cov_1.632353_g51451_i0 PRJNA495391 52503 171 1.632353 2.79132363 Hydra vulgaris 6087 Cnidaria other_Eukaryota 183 4.869999999999999e-42   NTclustered gi|2744890083|ref|XR_010641937.1| 6087 g51451 i0 85.965 1.43859649122807 171 24 100 0 1 171 447 617 PREDICTED: Hydra vulgaris uncharacterized LOC136087622 (LOC136087622), transcript variant X1, ncRNA blastn 246 183 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydridae Hydra Hydra vulgaris
24702484 24702484 PRJNA495391_S_NODE_40800_length_192_cov_1.757962_g39748_i0 PRJNA495391 40800 192 1.757962 3.37528704 Montipora capricornis 246305 Cnidaria other_Eukaryota 126 9.6e-25   NTclustered gi|2812140899|ref|XM_068880408.1| 246305 g39748 i0 82.979 0.734375 141 22 73 2 33 172 169 308 PREDICTED: Montipora capricornis small ribosomal subunit protein eS17-like (LOC138032703), mRNA blastn 141 126 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Acroporidae Montipora Montipora capricornis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;