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contig_metadata

32 rows where analysis = "blastn", bioproject = "PRJNA495391" and tax_clade = "Sar"

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tax_superkingdom 1

tax_clade 1

  • Sar · 32 ✖

bioproject 1

  • PRJNA495391 · 32 ✖

analysis 1

  • blastn · 32 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
476749 476749 PRJNA495391_S_NODE_48261_length_178_cov_1.111888_g47209_i0 PRJNA495391 48261 178 1.111888 1.97916064 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 219 1.4e-52   NTclustered gi|301014695|gb|GQ377692.1| 151077 g47209 i0 88.764 87.7359550561798 178 20 100 0 1 178 227 404 Chilodonella uncinata ribosomal protein S23a-like (rps23a) mRNA, complete sequence blastn 15617 219 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
476965 476965 PRJNA495391_S_NODE_56861_length_165_cov_1.530769_g55809_i0 PRJNA495391 56861 165 1.530769 2.52576885 Phytophthora infestans 4787 SAR_Eukaryotes SAR_Eukaryotes 174 2.82e-39   NTclustered gi|301098172|ref|XM_002898134.1| 403677 g55809 i0 100 0.56969696969697 94 0 57 0 72 165 14271 14178 Phytophthora infestans T30-4 dynein heavy chain, outer arm (PITG_15967), partial mRNA blastn 94 174 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora infestans
1751167 1751167 PRJNA495391_S_NODE_31042_length_218_cov_1.327869_g29990_i0 PRJNA495391 31042 218 1.327869 2.89475442 Albugo laibachii 653948 SAR_Eukaryotes SAR_Eukaryotes 392 1e-104   NTclustered gi|325195136|emb|FR825930.1| 890382 g29990 i0 99.083 16.4128440366972 218 2 100 0 1 218 228 11 Albugo laibachii Nc14, genomic contig CONTIG_2990_NC14_v4_499_54 blastn 3578 392 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo laibachii
1752281 1752281 PRJNA495391_S_NODE_9362_length_394_cov_3.816156_g8310_i0 PRJNA495391 9362 394 3.816156 15.03565464 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 359 1.9799999999999998e-94   NTclustered gi|820695469|tpe|LN714488.1| 572307 g8310 i0 87.662 44.6446700507614 308 38 100 0 1 308 301640 301947 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 17590 359 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
4303525 4303525 PRJNA495391_S_NODE_46904_length_180_cov_1.744828_g45852_i0 PRJNA495391 46904 180 1.744828 3.1406904 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 209 8.56e-50   NTclustered gi|820695469|tpe|LN714488.1| 572307 g45852 i0 89.759 1.84444444444444 166 14 92 3 1 165 80407 80570 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 332 209 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
4935572 4935572 PRJNA495391_S_NODE_41204_length_191_cov_1.961538_g40152_i0 PRJNA495391 41204 191 1.961538 3.74653758 Albugo 65356 SAR_Eukaryotes SAR_Eukaryotes 148 2.04e-31   NTclustered gi|325180604|emb|FR824053.1| 890382 g40152 i0 88.525 1.27748691099476 122 14 64 0 1 122 118982 118861 Albugo laibachii Nc14, genomic contig CONTIG_8_NC14_v4_238846_215 blastn 244 148 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo laibachii
4935666 4935666 PRJNA495391_S_NODE_48884_length_176_cov_18.085106_g47832_i0 PRJNA495391 48884 176 18.085106 31.82978656 Bacillariophyta 2836 SAR_Eukaryotes SAR_Eukaryotes 318 1.3299999999999995e-82   NTclustered gi|72398633|gb|DQ093370.1| 29207 g47832 i0 99.432 99.9261363636364 176 0 100 1 1 176 785 611 Stephanodiscus hantzschii strain CCAP 1079/4 18S small subunit ribosomal RNA gene, partial sequence blastn 17587 318 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Stephanodiscales Stephanodiscaceae Stephanodiscus Stephanodiscus hantzschii
5579472 5579472 PRJNA495391_S_NODE_19825_length_269_cov_8.927350_g18773_i0 PRJNA495391 19825 269 8.92735 24.0145715 Encyonema minutum 431330 SAR_Eukaryotes SAR_Eukaryotes 497 2.63e-136   NTclustered gi|168145881|emb|AM710515.1| 431330 g18773 i0 100 100.762081784387 269 0 100 0 1 269 25 293 Encyonema minutum partial 28S rRNA gene, strain AT-137.13 blastn 27105 497 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Cymbellales Cymbellaceae Encyonema Encyonema minutum
6210587 6210587 PRJNA495391_S_NODE_24865_length_241_cov_8.223301_g23813_i0 PRJNA495391 24865 241 8.223301 19.81815541 Tetrahymena 5890 SAR_Eukaryotes SAR_Eukaryotes 435 1.84e-117   NTclustered gi|10782|emb|X54004.1| 5908 g23813 i0 99.17 80.0331950207469 241 2 100 0 1 241 3189 2949 Tetrahymena pyriformis gene for 26S large subunit ribosomal RNA blastn 19288 435 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pyriformis
6854747 6854747 PRJNA495391_S_NODE_64446_length_156_cov_2.471074_g63394_i0 PRJNA495391 64446 156 2.471074 3.85487544 Naviculales sp. 2126271 SAR_Eukaryotes SAR_Eukaryotes 161 2.05e-35   NTclustered gi|2620230846|gb|OR797295.1| 2126271 g63394 i0 85.987 68.5641025641026 157 15 100 6 1 156 4851 4701 Naviculales sp. strain SZCZO2114 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 10696 161 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales     Naviculales sp.
7485150 7485150 PRJNA495391_S_NODE_18706_length_277_cov_2.061983_g17654_i0 PRJNA495391 18706 277 2.061983 5.71169291 Albugo 65356 SAR_Eukaryotes SAR_Eukaryotes 237 6.560000000000001e-58   NTclustered gi|325186025|emb|FR824142.1| 890382 g17654 i0 82.31 4 277 46 99 3 1 276 75792 75518 Albugo laibachii Nc14, genomic contig CONTIG_97_NC14_v4_80307_117 blastn 1108 237 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo laibachii
10679293 10679293 PRJNA495391_S_NODE_10289_length_375_cov_5.641176_g9237_i0 PRJNA495391 10289 375 5.641176 21.15441 Epistylis sp. 6 2979169 SAR_Eukaryotes SAR_Eukaryotes 676 0   NTclustered gi|2304601482|gb|OP458303.1| 2979169 g9237 i0 99.2 98.8933333333333 375 3 100 0 1 375 410 36 Epistylis sp. 6 large subunit ribosomal RNA gene, partial sequence blastn 37085 676 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Epistylidae Epistylis Epistylis sp. 6
11310127 11310127 PRJNA495391_S_NODE_10369_length_374_cov_2.185841_g9317_i0 PRJNA495391 10369 374 2.185841 8.17504534 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 603 7.829999999999997e-168   NTclustered gi|833494855|ref|XM_012915027.1| 5866 g9317 i0 95.722 1037.79144385027 374 16 100 0 1 374 403 30 Babesia bigemina hypothetical protein, conserved partial mRNA blastn 388134 608 0.991776315789474 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia bigemina
11310228 11310228 PRJNA495391_S_NODE_18189_length_281_cov_1.764228_g17137_i0 PRJNA495391 18189 281 1.764228 4.95748068 Albugo 65356 SAR_Eukaryotes SAR_Eukaryotes 292 1.4e-74   NTclustered gi|325180604|emb|FR824053.1| 890382 g17137 i0 86.245 2.12099644128114 269 37 96 0 1 269 118410 118678 Albugo laibachii Nc14, genomic contig CONTIG_8_NC14_v4_238846_215 blastn 596 292 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo laibachii
11310644 11310644 PRJNA495391_S_NODE_51469_length_172_cov_2.715328_g50417_i0 PRJNA495391 51469 172 2.715328 4.67036416 Coscinodiscophyceae 33836 SAR_Eukaryotes SAR_Eukaryotes 246 6.17e-61   NTclustered gi|2632235341|gb|OR922723.1| 35128 g50417 i0 96.026 87.5930232558139 151 6 88 0 1 151 3829 3679 Thalassiosira pseudonana strain AGSB0188 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 15066 246 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Thalassiosirales Thalassiosiraceae Thalassiosira Thalassiosira pseudonana
11955679 11955679 PRJNA495391_S_NODE_58450_length_163_cov_1.546875_g57398_i0 PRJNA495391 58450 163 1.546875 2.52140625 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 241 2.7000000000000008e-59   NTclustered gi|820695469|tpe|LN714488.1| 572307 g57398 i0 93.75 7.34355828220859 160 10 100 0 1 160 300561 300402 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 1197 241 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
12586201 12586201 PRJNA495391_S_NODE_34690_length_207_cov_1.622093_g33638_i0 PRJNA495391 34690 207 1.622093 3.35773251 Coscinodiscophyceae 33836 SAR_Eukaryotes SAR_Eukaryotes 383 5.65e-102   NTclustered gi|2468683651|ref|NC_072630.1| 29208 g33638 i0 100 198.400966183575 207 0 100 0 1 207 69399 69605 Stephanodiscus niagarae strain BB16 chloroplast, complete genome blastn 41069 383 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Stephanodiscales Stephanodiscaceae Stephanodiscus Stephanodiscus niagarae
15135422 15135422 PRJNA495391_S_NODE_38412_length_197_cov_2.438272_g37360_i0 PRJNA495391 38412 197 2.438272 4.80339584 Albugo 65356 SAR_Eukaryotes SAR_Eukaryotes 265 2.0099999999999997e-66   NTclustered gi|325180604|emb|FR824053.1| 890382 g37360 i0 90.863 2.24873096446701 197 18 100 0 1 197 117987 117791 Albugo laibachii Nc14, genomic contig CONTIG_8_NC14_v4_238846_215 blastn 443 265 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo laibachii
15778622 15778622 PRJNA495391_S_NODE_22373_length_254_cov_1.771689_g21321_i0 PRJNA495391 22373 254 1.771689 4.50009006 Albugo laibachii 653948 SAR_Eukaryotes SAR_Eukaryotes 233 7.669999999999999e-57   NTclustered gi|325194646|emb|FR825458.1| 890382 g21321 i0 86.73 2.29527559055118 211 26 83 2 1 210 262 53 Albugo laibachii Nc14, genomic contig CONTIG_2303_NC14_v4_894_25 blastn 583 233 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo laibachii
15778946 15778946 PRJNA495391_S_NODE_34093_length_208_cov_4.815029_g33041_i0 PRJNA495391 34093 208 4.815029 10.01526032 Phaeodactylum tricornutum 2850 SAR_Eukaryotes SAR_Eukaryotes 252 1.67e-62   NTclustered gi|146762526|gb|EF553458.1| 2850 g33041 i0 88.517 100.302884615385 209 23 100 1 1 208 4342 4134 Phaeodactylum tricornutum strain CCAP 1055/1 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 20863 252 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Phaeodactylaceae Phaeodactylum Phaeodactylum tricornutum
15779168 15779168 PRJNA495391_S_NODE_42273_length_189_cov_1.448052_g41221_i0 PRJNA495391 42273 189 1.448052 2.73681828 Sterkiella nova 200597 SAR_Eukaryotes SAR_Eukaryotes 110 9.49e-20   NTclustered gi|405113127|gb|JX441317.1| 200597 g41221 i0 81.159 4.33333333333333 138 24 72 2 15 151 368 504 Sterkiella nova macronuclear nanochromosome, complete sequence blastn 819 110 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Sterkiella Sterkiella nova
17054285 17054285 PRJNA495391_S_NODE_59114_length_162_cov_1.921260_g58062_i0 PRJNA495391 59114 162 1.92126 3.1124412 Albugo laibachii 653948 SAR_Eukaryotes SAR_Eukaryotes 250 4.45e-62   NTclustered gi|325195057|emb|FR825852.1| 890382 g58062 i0 94.479 83.4814814814815 163 8 100 1 1 162 275 113 Albugo laibachii Nc14, genomic contig CONTIG_2891_NC14_v4_540_391 blastn 13524 250 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo laibachii
17685010 17685010 PRJNA495391_S_NODE_31494_length_216_cov_2.259669_g30442_i0 PRJNA495391 31494 216 2.259669 4.88088504 root 1 Root_unresolved Root_unresolved 348 2.1700000000000002e-91   NTclustered gi|74325165|ref|NC_007405.1| 35128 g30442 i0 96.244 92.6296296296296 213 7 98 1 1 212 14881 15093 Thalassiosira pseudonana mitochondrion, complete genome blastn 20008 348 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Thalassiosirales Thalassiosiraceae Thalassiosira Thalassiosira pseudonana
18327416 18327416 PRJNA495391_S_NODE_13495_length_325_cov_3.148276_g12443_i0 PRJNA495391 13495 325 3.148276 10.231897 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 560 4.1e-155   NTclustered gi|820695469|tpe|LN714488.1| 572307 g12443 i0 97.84 5.22153846153846 324 7 99 0 1 324 117536 117213 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 1697 560 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
18327417 18327417 PRJNA495391_S_NODE_13535_length_325_cov_2.289655_g12483_i0 PRJNA495391 13535 325 2.289655 7.44137875 Nitzschia palea 303400 SAR_Eukaryotes SAR_Eukaryotes 416 9.399999999999999e-112   NTclustered gi|1419234869|dbj|AP018512.1| 303400 g12483 i0 94.776 98.1261538461538 268 13 82 1 55 322 4800 5066 Nitzschia palea NIES-2729 mitochondrial DNA, nearly complete genome blastn 31891 416 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae Nitzschia Nitzschia palea
18327564 18327564 PRJNA495391_S_NODE_19195_length_273_cov_10.508403_g18143_i0 PRJNA495391 19195 273 10.508403 28.68794019 Albugo candida 65357 SAR_Eukaryotes SAR_Eukaryotes 503 5.76e-138   NTclustered gi|380865879|gb|JQ277732.1| 65357 g18143 i0 100 96.9267399267399 272 0 99 0 2 273 1315 1044 Albugo candida strain TT1958 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 26461 503 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo candida
19601804 19601804 PRJNA495391_S_NODE_18676_length_277_cov_2.586777_g17624_i0 PRJNA495391 18676 277 2.586777 7.16537229 Philasterida sp. 2006707 SAR_Eukaryotes SAR_Eukaryotes 172 1.87e-38   NTclustered gi|2354193480|gb|OP896969.1| 2006707 g17624 i0 79.273 55.4729241877256 275 36 97 17 3 270 1239 979 Philasterida sp. strain tDaCF9_52 large subunit ribosomal RNA gene, partial sequence blastn 15366 172 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida     Philasterida sp.
19602647 19602647 PRJNA495391_S_NODE_49596_length_175_cov_2.628571_g48544_i0 PRJNA495391 49596 175 2.628571 4.59999925 Navicula tsukamotoi 2018706 SAR_Eukaryotes SAR_Eukaryotes 307 2.8500000000000004e-79   NTclustered gi|2288719593|gb|OL415007.1| 2018706 g48544 i0 98.286 99.2857142857143 175 3 100 0 1 175 16729 16903 Haslea tsukamotoi isolate Jiaozhou Bay in China chloroplast, complete genome blastn 17375 307 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Naviculaceae Navicula Navicula tsukamotoi
22152422 22152422 PRJNA495391_S_NODE_17118_length_289_cov_5.413386_g16066_i0 PRJNA495391 17118 289 5.413386 15.64468554 Gomphonema parvulum 97227 SAR_Eukaryotes SAR_Eukaryotes 381 2.9999999999999997e-101   NTclustered gi|2444483253|gb|OP718170.1| 97227 g16066 i0 91.135 100.515570934256 282 24 98 1 8 289 5476 5196 Gomphonema parvulum mitochondrion, complete genome blastn 29049 381 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Cymbellales Gomphonemataceae Gomphonema Gomphonema parvulum
22153244 22153244 PRJNA495391_S_NODE_47818_length_178_cov_2.384615_g46766_i0 PRJNA495391 47818 178 2.384615 4.2446147 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 222 1.08e-53   NTclustered gi|820695469|tpe|LN714488.1| 572307 g46766 i0 95.652 22.1404494382022 138 6 100 0 1 138 299862 299999 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 3941 222 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
23428337 23428337 PRJNA495391_S_NODE_20779_length_263_cov_5.912281_g19727_i0 PRJNA495391 20779 263 5.912281 15.54929903 Mallomonas punctifera 984270 SAR_Eukaryotes SAR_Eukaryotes 481 2.58e-131   NTclustered gi|859810736|gb|KM817918.1| 984270 g19727 i0 99.62 100.969581749049 263 1 100 0 1 263 306 44 Mallomonas punctifera strain Okgol032010B 26S ribosomal RNA gene, partial sequence blastn 26555 481 1 Eukaryota Sar     Synurophyceae Synurales Mallomonadaceae Mallomonas Mallomonas punctifera
24701842 24701842 PRJNA495391_S_NODE_17840_length_283_cov_5.697581_g16788_i0 PRJNA495391 17840 283 5.697581 16.12415423 Skeletonema grevillei 371681 SAR_Eukaryotes SAR_Eukaryotes 472 1.6899999999999998e-128   NTclustered gi|2739942915|dbj|LC814775.1| 371681 g16788 i0 97.143 104.247349823322 280 7 99 1 1 280 33184 33462 Skeletonema grevillei NIES-2840 mitochondrial DNA, complete genome blastn 29502 472 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Thalassiosirales Skeletonemataceae Skeletonema Skeletonema grevillei

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;