RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA495391" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA495391 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
477249 477249 PRJNA495391_S_NODE_69181_length_152_cov_1.230769_g68129_i0 PRJNA495391 69181 152 1.230769 1.87076888 Candidatus Delongbacteria bacterium 2044594 Bacteria Bacteria 104 3.38e-18   NTclustered gi|2621703064|emb|OY760505.1| 2044594 g68129 i0 81.203 0.875 133 22 86 3 22 152 1116298 1116167 MAG: Candidatus Delongbacteria bacterium isolate e048cef4-8537-4b4e-84e6-a717ce783c17 genome assembly, chromosome: 1 blastn 133 104 1 Bacteria Bacteria candidate phyla   Candidatus Delongiibacteriota         Candidatus Delongbacteria bacterium
20878568 20878568 PRJNA495391_S_NODE_49457_length_176_cov_1.127660_g48405_i0 PRJNA495391 49457 176 1.12766 1.9846816 Candidatus Nanosynbacter sp. BB002 3393757 Bacteria Bacteria 193 8.39e-45   NTclustered gi|2692798772|gb|CP146064.1| 3393757 g48405 i0 86.364 1 176 24 100 0 1 176 678061 677886 Candidatus Nanosynbacter sp. BB002 chromosome, complete genome blastn 176 193 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Nanosynbacterales Candidatus Nanosynbacteraceae Candidatus Nanosynbacter Candidatus Nanosynbacter sp. BB002

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;