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contig_metadata

16 rows where analysis = "blastn", bioproject = "PRJNA494251" and tax_phylum = "Tubulinea"

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tax_superkingdom 1

tax_phylum 1

  • Tubulinea · 16 ✖

tax_clade 1

bioproject 1

  • PRJNA494251 · 16 ✖

analysis 1

  • blastn · 16 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
475534 475534 PRJNA494251_P_NODE_43281_length_246_cov_0.890173_g42967_i0 PRJNA494251 43281 246 0.890173 2.18982558 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 388 1.49e-103   NTclustered gi|89357437|gb|DQ407656.1| 5778 g42967 i0 95.122 2 246 12 100 0 1 246 123 368 Hartmannella vermiformis chitinase-like protein cluster A mRNA, partial cds blastn 492 388 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
475719 475719 PRJNA494251_S_NODE_541_length_292_cov_0.913242_g526_i0 PRJNA494251 541 292 0.913242 2.66666664 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 444 3.82e-120   NTclustered gi|423292048|gb|JQ519470.1| 5778 g526 i0 98.413 89.8561643835616 252 4 86 0 41 292 1 252 Vermamoeba vermiformis clone JG10.132_b5 alpha tubulin gene, partial cds blastn 26238 444 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
1750285 1750285 PRJNA494251_P_NODE_32022_length_265_cov_1.468750_g31708_i0 PRJNA494251 32022 265 1.46875 3.8921875 Paraflabellula hoguae 136459 Tubulinea other_Eukaryota 148 3.0000000000000003e-31   NTclustered gi|145386791|gb|EF216916.1| 136459 g31708 i0 87.023 45.3622641509434 131 17 49 0 135 265 948 1078 Paraflabellula hoguae 28S large subunit ribosomal RNA gene, partial sequence blastn 12021 148 1 Eukaryota Amoebozoa   Tubulinea Elardia Leptomyxida Flabellulidae Paraflabellula Paraflabellula hoguae
1750582 1750582 PRJNA494251_S_NODE_842_length_234_cov_2.540373_g827_i0 PRJNA494251 842 234 2.540373 5.94447282 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 390 3.909999999999999e-104   NTclustered gi|909719645|gb|KT185625.1| 5778 g827 i0 98.636 2.96581196581197 220 3 94 0 15 234 5566 5785 Vermamoeba vermiformis isolate 1 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 694 390 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
3026271 3026271 PRJNA494251_P_NODE_31563_length_266_cov_3.088083_g31249_i0 PRJNA494251 31563 266 3.088083 8.21430078 Cryptodifflugia operculata 1078836 Tubulinea other_Eukaryota 442 1.2399999999999995e-119   NTclustered gi|2651357777|gb|PP174294.1| 1078836 g31249 i0 97.665 74.3947368421053 257 6 97 0 1 257 2433 2689 Cryptodifflugia operculata isolate 75 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 19789 442 1 Eukaryota Amoebozoa   Tubulinea Elardia Arcellinida Cryptodifflugiidae Cryptodifflugia Cryptodifflugia operculata
4302525 4302525 PRJNA494251_S_NODE_304_length_384_cov_6.672026_g289_i0 PRJNA494251 304 384 6.672026 25.62057984 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 652 0   NTclustered gi|909719645|gb|KT185625.1| 5778 g289 i0 98.383 29.1197916666667 371 6 97 0 14 384 6734 7104 Vermamoeba vermiformis isolate 1 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 11182 652 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
5579183 5579183 PRJNA494251_S_NODE_225_length_429_cov_1.803371_g210_i0 PRJNA494251 225 429 1.803371 7.73646159 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 736 0   NTclustered gi|300078496|gb|GU001158.1| 5778 g210 i0 98.558 23.2540792540793 416 6 97 0 14 429 1219 1634 Hartmannella vermiformis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 9976 736 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
9403252 9403252 PRJNA494251_P_NODE_25328_length_289_cov_2.296296_g25014_i0 PRJNA494251 25328 289 2.296296 6.63629544 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 414 2.96e-111   NTclustered gi|62910949|gb|AY925001.1| 5778 g25014 i0 92.542 1.74740484429066 295 12 99 6 2 289 826 535 Hartmannella vermiformis Rpl7A mRNA, partial cds blastn 505 414 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
10035427 10035427 PRJNA494251_S_NODE_328_length_372_cov_3.632107_g313_i0 PRJNA494251 328 372 3.632107 13.51143804 Tubulinea 555369 Tubulinea other_Eukaryota 662 0   NTclustered gi|459376662|gb|KC669516.1| 5778 g313 i0 100 96.1801075268817 358 0 96 0 1 358 386 29 Vermamoeba vermiformis strain D_FLA14 18S ribosomal RNA gene, partial sequence blastn 35779 662 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
10679276 10679276 PRJNA494251_S_NODE_569_length_285_cov_0.768868_g554_i0 PRJNA494251 569 285 0.768868 2.1912738 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 372 1.78e-98   NTclustered gi|62910949|gb|AY925001.1| 5778 g554 i0 91.636 1.61754385964912 275 13 95 7 14 285 559 826 Hartmannella vermiformis Rpl7A mRNA, partial cds blastn 461 372 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
11310122 11310122 PRJNA494251_S_NODE_509_length_301_cov_3.951754_g494_i0 PRJNA494251 509 301 3.951754 11.89477954 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 521 1.7799999999999999e-143   NTclustered gi|300078496|gb|GU001158.1| 5778 g494 i0 99.306 41.0830564784053 288 2 96 0 1 288 1226 939 Hartmannella vermiformis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 12366 521 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
14504386 14504386 PRJNA494251_S_NODE_592_length_280_cov_3.801932_g577_i0 PRJNA494251 592 280 3.801932 10.6454096 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 490 4.61e-134   NTclustered gi|300078496|gb|GU001158.1| 5778 g577 i0 100 32.9285714285714 265 0 95 0 3 267 3680 3416 Hartmannella vermiformis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 9220 490 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
17052527 17052527 PRJNA494251_P_NODE_20034_length_317_cov_1.381148_g19720_i0 PRJNA494251 20034 317 1.381148 4.37823916 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 470 6.92e-128   NTclustered gi|421976355|gb|JQ519494.1| 5778 g19720 i0 93.375 13.5709779179811 317 21 100 0 1 317 781 465 Vermamoeba vermiformis clone JG10.150_g4 elongation factor 2 alpha gene, partial cds blastn 4302 470 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
20877449 20877449 PRJNA494251_S_NODE_837_length_238_cov_2.448485_g822_i0 PRJNA494251 837 238 2.448485 5.8273943 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 416 6.579999999999998e-112   NTclustered gi|909719645|gb|KT185625.1| 5778 g822 i0 100 95.0084033613445 225 0 95 0 1 225 4887 4663 Vermamoeba vermiformis isolate 1 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 22612 416 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
23428047 23428047 PRJNA494251_P_NODE_9479_length_433_cov_1.502778_g9174_i0 PRJNA494251 9479 433 1.502778 6.50702874 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 558 2.02e-154   NTclustered gi|62910949|gb|AY925001.1| 5778 g9174 i0 95.677 0.89838337182448 347 15 80 0 2 348 347 1 Hartmannella vermiformis Rpl7A mRNA, partial cds blastn 389 558 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
25333266 25333266 PRJNA494251_S_NODE_140_length_531_cov_3.292576_g125_i0 PRJNA494251 140 531 3.292576 17.48357856 Vermamoeba 1260114 Tubulinea other_Eukaryota 941 0   NTclustered gi|909719645|gb|KT185625.1| 5778 g125 i0 99.421 68.2335216572505 518 3 98 0 1 518 5575 5058 Vermamoeba vermiformis isolate 1 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 36232 941 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;