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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA494251" and tax_phylum = "Thermoproteota"

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tax_superkingdom 1

tax_phylum 1

  • Thermoproteota · 5 ✖

tax_kingdom 1

bioproject 1

  • PRJNA494251 · 5 ✖

analysis 1

  • blastn · 5 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10678858 10678858 PRJNA494251_P_NODE_23529_length_298_cov_1.253333_g23215_i0 PRJNA494251 23529 298 1.253333 3.73493234 uncultured crenarchaeote 29281 Archaea Archaea 545 1.04e-150   NTclustered gi|22797874|emb|AJ496176.1| 29281 g23215 i0 99.664 99.1174496644295 298 1 100 0 1 298 7753 8050 Uncultured crenarchaeote 34 kb genomic fragment blastn 29537 545 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote
11310095 11310095 PRJNA494251_P_NODE_6189_length_520_cov_3.697987_g5889_i0 PRJNA494251 6189 520 3.697987 19.2295324 root 1 Root_unresolved Root_unresolved 937 0   NTclustered gi|220683870|gb|FJ468481.1| 29281 g5889 i0 99.229 102.376923076923 519 4 99 0 2 520 1433 915 Uncultured crenarchaeote clone M72 16S ribosomal RNA gene, partial sequence blastn 53236 937 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote
16409634 16409634 PRJNA494251_P_NODE_7833_length_468_cov_2.151899_g7530_i0 PRJNA494251 7833 468 2.151899 10.07088732 Thermoproteati 1783275 Archaea Archaea 769 0   NTclustered gi|22797874|emb|AJ496176.1| 29281 g7530 i0 96.36 46.0128205128205 467 17 99 0 2 468 7611 7145 Uncultured crenarchaeote 34 kb genomic fragment blastn 21534 773 0.994825355756792 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote
17684735 17684735 PRJNA494251_P_NODE_9374_length_435_cov_1.991713_g9069_i0 PRJNA494251 9374 435 1.991713 8.66395155 Thermoproteati 1783275 Archaea Archaea 761 0   NTclustered gi|22797874|emb|AJ496176.1| 29281 g9069 i0 98.169 89.8850574712644 437 6 100 2 1 435 8025 8461 Uncultured crenarchaeote 34 kb genomic fragment blastn 39100 761 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote
20233267 20233267 PRJNA494251_P_NODE_1636_length_924_cov_3.678026_g1418_i0 PRJNA494251 1636 924 3.678026 33.98496024 Thermoproteati 1783275 Archaea Archaea 1646 0   NTclustered gi|22797874|emb|AJ496176.1| 29281 g1418 i0 98.81 103.549783549784 924 11 100 0 1 924 3560 4483 Uncultured crenarchaeote 34 kb genomic fragment blastn 95680 1646 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;