RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA494251" and tax_phylum = "Tardigrada"

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tax_superkingdom 1

tax_phylum 1

  • Tardigrada · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA494251 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8128328 8128328 PRJNA494251_P_NODE_27207_length_282_cov_1.444976_g26893_i0 PRJNA494251 27207 282 1.444976 4.07483232 Paramacrobiotus metropolitanus 2943436 Tardigrada other_Eukaryota 60.2 1.55e-4   NTclustered gi|2493469906|ref|XM_055489449.1| 2943436 g26893 i0 100 6.85106382978723 32 0 11 0 219 250 226 257 PREDICTED: Paramacrobiotus metropolitanus flotillin-1-like (LOC129593235), mRNA blastn 1932 60.2 1 Eukaryota Opisthokonta Metazoa Tardigrada Eutardigrada Parachela Macrobiotidae Paramacrobiotus Paramacrobiotus metropolitanus
9403566 9403566 PRJNA494251_P_NODE_7068_length_490_cov_2.170264_g6765_i0 PRJNA494251 7068 490 2.170264 10.6342936 Paramacrobiotus metropolitanus 2943436 Tardigrada other_Eukaryota 220 1.2399999999999999e-52   NTclustered gi|2493491302|ref|XM_055494843.1| 2943436 g6765 i0 77.871 1.90816326530612 357 77 73 2 133 488 1602 1247 PREDICTED: Paramacrobiotus metropolitanus V-type proton ATPase subunit B (LOC129597357), mRNA blastn 935 220 1 Eukaryota Opisthokonta Metazoa Tardigrada Eutardigrada Parachela Macrobiotidae Paramacrobiotus Paramacrobiotus metropolitanus
23427693 23427693 PRJNA494251_P_NODE_25539_length_288_cov_2.883721_g25225_i0 PRJNA494251 25539 288 2.883721 8.30511648 Paramacrobiotus metropolitanus 2943436 Tardigrada other_Eukaryota 106 2.02e-18   NTclustered gi|2493423832|ref|XM_055477276.1| 2943436 g25225 i0 73.864 3.40625 264 69 92 0 1 264 472 735 PREDICTED: Paramacrobiotus metropolitanus ADP-ribosylation factor 1 (LOC129584880), transcript variant X1, mRNA blastn 981 106 1 Eukaryota Opisthokonta Metazoa Tardigrada Eutardigrada Parachela Macrobiotidae Paramacrobiotus Paramacrobiotus metropolitanus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;