contig_metadata
11 rows where analysis = "blastn", bioproject = "PRJNA494251" and tax_phylum = "Nematoda"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 475174 | 475174 | PRJNA494251_P_NODE_11661_length_396_cov_3.012384_g11355_i0 | PRJNA494251 | 11661 | 396 | 3.012384 | 11.92904064 | Strongyloides papillosus | 174720 | Nematoda | Nematoda | 202 | 3.5599999999999996e-47 | NTclustered | gi|690018840|emb|LM526136.1| | 174720 | g11355 | i0 | 79.649 | 6.72727272727273 | 285 | 54 | 71 | 4 | 53 | 335 | 8041 | 7759 | Strongyloides papillosus genome assembly S_papillosus_LIN ,scaffold SPAL_contig0000493 | blastn | 2664 | 202 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Strongyloididae | Strongyloides | Strongyloides papillosus | |
| 475605 | 475605 | PRJNA494251_P_NODE_50041_length_241_cov_0.916667_g49727_i0 | PRJNA494251 | 50041 | 241 | 0.916667 | 2.20916747 | Caenorhabditis remanei | 31234 | Nematoda | Nematoda | 143 | 1.2499999999999998e-29 | NTclustered | gi|2445372511|ref|XM_053729906.1| | 31234 | g49727 | i0 | 80.749 | 15.0082987551867 | 187 | 32 | 77 | 4 | 7 | 191 | 764 | 948 | Caenorhabditis remanei uncharacterized protein (GCK72_013604), partial mRNA | blastn | 3617 | 143 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Rhabditidae | Caenorhabditis | Caenorhabditis remanei | |
| 4302080 | 4302080 | PRJNA494251_P_NODE_1884_length_867_cov_2.156171_g1655_i0 | PRJNA494251 | 1884 | 867 | 2.156171 | 18.69400257 | Caenorhabditis briggsae | 6238 | Nematoda | Nematoda | 222 | 6.29e-53 | NTclustered | gi|2158428398|ref|XM_002640560.2| | 6238 | g1655 | i0 | 72.335 | 19.2848904267589 | 741 | 193 | 85 | 12 | 131 | 865 | 307 | 1041 | Caenorhabditis briggsae Protein CBG08717 (CBG08717), partial mRNA | blastn | 16720 | 222 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Rhabditidae | Caenorhabditis | Caenorhabditis briggsae | |
| 4302526 | 4302526 | PRJNA494251_S_NODE_324_length_376_cov_0.818482_g309_i0 | PRJNA494251 | 324 | 376 | 0.818482 | 3.07749232 | Koerneria sp. RS1982 | 358044 | Nematoda | Nematoda | 207 | 7.22e-49 | NTclustered | gi|150982149|gb|EF634663.1| | 358044 | g309 | i0 | 78.964 | 5.3563829787234 | 309 | 61 | 82 | 3 | 56 | 362 | 411 | 105 | Koerneria sp. RS1982 large subunit ribosomal protein 27a (rpl-27a) mRNA, partial cds | blastn | 2014 | 207 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Neodiplogasteridae | Koerneria | Koerneria sp. RS1982 | |
| 13229437 | 13229437 | PRJNA494251_P_NODE_7451_length_479_cov_7.098522_g7148_i0 | PRJNA494251 | 7451 | 479 | 7.098522 | 34.00192038 | Pristionchus pauli | 376545 | Nematoda | Nematoda | 292 | 2.52e-74 | NTclustered | gi|150982019|gb|EF634598.1| | 376545 | g7148 | i0 | 81.492 | 4.7098121085595 | 362 | 61 | 75 | 6 | 68 | 426 | 37 | 395 | Pristionchus pauli large subunit ribosomal protein 23 (rpl-23) mRNA, partial cds | blastn | 2256 | 292 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Neodiplogasteridae | Pristionchus | Pristionchus pauli | |
| 14504338 | 14504338 | PRJNA494251_P_NODE_6932_length_494_cov_1.833729_g6629_i0 | PRJNA494251 | 6932 | 494 | 1.833729 | 9.05862126 | Strongyloides ratti | 34506 | Nematoda | Nematoda | 344 | 7.099999999999998e-90 | NTclustered | gi|1376146183|ref|XM_024653652.1| | 34506 | g6629 | i0 | 79.794 | 84.9757085020243 | 485 | 88 | 97 | 9 | 15 | 494 | 1419 | 940 | Strongyloides ratti ATP synthase subunit beta (SRAE_2000256800), partial mRNA | blastn | 41978 | 344 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Strongyloididae | Strongyloides | Strongyloides ratti | |
| 16409596 | 16409596 | PRJNA494251_P_NODE_4053_length_624_cov_2.430127_g3763_i0 | PRJNA494251 | 4053 | 624 | 2.430127 | 15.16399248 | Caenorhabditis | 6237 | Nematoda | Nematoda | 121 | 1.6700000000000001e-22 | NTclustered | gi|268558427|ref|XM_002637158.1| | 6238 | g3763 | i0 | 81.944 | 1.24519230769231 | 144 | 24 | 23 | 2 | 341 | 483 | 200 | 58 | Caenorhabditis briggsae Protein CBR-EMO-1 (Cbr-emo-1), partial mRNA | blastn | 777 | 121 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Rhabditidae | Caenorhabditis | Caenorhabditis briggsae | |
| 17052507 | 17052507 | PRJNA494251_P_NODE_1874_length_868_cov_3.654088_g1645_i0 | PRJNA494251 | 1874 | 868 | 3.654088 | 31.71748384 | Tylopharynx sp. WEM-2009 | 669147 | Nematoda | Nematoda | 470 | 2.04e-127 | NTclustered | gi|256709136|gb|GQ422220.1| | 669147 | g1645 | i0 | 79.076 | 26.0403225806452 | 693 | 137 | 79 | 8 | 106 | 794 | 711 | 23 | Tylopharynx sp. WEM-2009 large subunit ribosomal protein 2 (rpl-2) mRNA, partial cds | blastn | 22603 | 470 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Tylopharyngidae | Tylopharynx | Tylopharynx sp. WEM-2009 | |
| 19601111 | 19601111 | PRJNA494251_P_NODE_21456_length_309_cov_1.165254_g21142_i0 | PRJNA494251 | 21456 | 309 | 1.165254 | 3.60063486 | Fictor stercorarius | 1538713 | Nematoda | Nematoda | 143 | 1.66e-29 | NTclustered | gi|675118981|gb|KJ877370.1| | 1538713 | g21142 | i0 | 85.401 | 2.69902912621359 | 137 | 20 | 44 | 0 | 112 | 248 | 407 | 271 | Fictor stercorarius strain RS9003 large subunit ribosomal protein 23 (rpl-23) mRNA, partial cds | blastn | 834 | 143 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Neodiplogasteridae | Fictor | Fictor stercorarius | |
| 20877148 | 20877148 | PRJNA494251_P_NODE_34297_length_258_cov_1.551351_g33983_i0 | PRJNA494251 | 34297 | 258 | 1.551351 | 4.00248558 | Necator americanus | 51031 | Nematoda | Nematoda | 159 | 1.3499999999999999e-34 | NTclustered | gi|2707604754|ref|XM_064207535.1| | 51031 | g33983 | i0 | 79.237 | 21.4922480620155 | 236 | 43 | 90 | 5 | 1 | 233 | 251 | 19 | Necator americanus uncharacterized protein (RB195_016392), partial mRNA | blastn | 5545 | 159 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Ancylostomatidae | Necator | Necator americanus | |
| 20877387 | 20877387 | PRJNA494251_P_NODE_6657_length_503_cov_3.846512_g6355_i0 | PRJNA494251 | 6657 | 503 | 3.846512 | 19.34795536 | Pristionchus hoplostomus | 1355913 | Nematoda | Nematoda | 167 | 1.68e-36 | NTclustered | gi|524845312|gb|KC819366.1| | 1355913 | g6355 | i0 | 81.166 | 24.5526838966203 | 223 | 28 | 43 | 11 | 223 | 438 | 264 | 49 | Pristionchus hoplostomus strain JU1090 subunit ribosomal protein 20 (rps-20) mRNA, partial cds | blastn | 12350 | 167 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Neodiplogasteridae | Pristionchus | Pristionchus hoplostomus |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;