RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA494251" and tax_phylum = "Endomyxa"

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tax_superkingdom 1

tax_phylum 1

  • Endomyxa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA494251 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16409511 16409511 PRJNA494251_P_NODE_15533_length_352_cov_2.734767_g15220_i0 PRJNA494251 15533 352 2.734767 9.62637984 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 237 8.56e-58   NTclustered gi|1150151083|ref|NC_034004.1| 70186 g15220 i0 84.082 46.9289772727273 245 39 70 0 59 303 20630 20386 Spongospora subterranea mitochondrion, complete genome blastn 16519 237 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Spongospora Spongospora subterranea
18327324 18327324 PRJNA494251_S_NODE_715_length_256_cov_0.770492_g700_i0 PRJNA494251 715 256 0.770492 1.97245952 Arachnula sp. CL12 862247 SAR_Eukaryotes SAR_Eukaryotes 230 1e-55   NTclustered gi|302026178|gb|GQ377695.1| 862247 g700 i0 84.167 89.93359375 240 35 93 3 8 246 275 512 Arachnula sp. CL12 elongation factor 1 alpha mRNA, partial cds blastn 23023 230 1 Eukaryota Sar   Endomyxa   Vampyrellida Leptophryidae Arachnula Arachnula sp. CL12

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;