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contig_metadata

17 rows where analysis = "blastn", bioproject = "PRJNA494251" and tax_phylum = "Chytridiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 17 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA494251 · 17 ✖

analysis 1

  • blastn · 17 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
475287 475287 PRJNA494251_P_NODE_20381_length_315_cov_1.272727_g20067_i0 PRJNA494251 20381 315 1.272727 4.00909005 Spizellomyces punctatus 109760 Fungi Fungi 76.8 1.75e-9   NTclustered gi|1027029571|ref|XR_001677165.1| 645134 g20067 i0 86.111 0.685714285714286 72 8 23 2 32 102 2702 2772 Spizellomyces punctatus DAOM BR117 28S ribosomal RNA (SPPG_11007), partial rRNA blastn 216 76.8 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces punctatus
1750023 1750023 PRJNA494251_P_NODE_10882_length_408_cov_1.292537_g10576_i0 PRJNA494251 10882 408 1.292537 5.27355096 Polychytrium aggregatum 110093 Fungi Fungi 93.5 2.31e-14   NTclustered gi|2432134879|ref|XM_053109802.1| 110093 g10576 i0 84.783 0.909313725490196 92 14 23 0 91 182 857 948 Polychytrium aggregatum galactose mutarotase-like domain-containing protein (BJ171DRAFT_492295), mRNA blastn 371 93.5 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
4302015 4302015 PRJNA494251_P_NODE_14124_length_366_cov_2.546075_g13815_i0 PRJNA494251 14124 366 2.546075 9.3186345 Fimicolochytrium jonesii 1396493 Fungi Fungi 198 4.22e-46   NTclustered gi|2432064921|ref|XM_053069781.1| 1396493 g13815 i0 87.356 44.3852459016393 174 20 47 2 85 257 1555 1383 Fimicolochytrium jonesii tubulin, alpha, ubiquitous (EV422DRAFT_521958), mRNA blastn 16245 198 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Fimicolochytrium Fimicolochytrium jonesii
4302103 4302103 PRJNA494251_P_NODE_21304_length_310_cov_0.843882_g20990_i0 PRJNA494251 21304 310 0.843882 2.6160342 Fimicolochytrium jonesii 1396493 Fungi Fungi 167 9.909999999999998e-37   NTclustered gi|2432101286|ref|XM_053071357.1| 1396493 g20990 i0 84 49.5032258064516 175 26 56 2 93 266 350 523 Fimicolochytrium jonesii ribosomal protein L22/L17 (EV422DRAFT_543881), mRNA blastn 15346 167 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Fimicolochytrium Fimicolochytrium jonesii
4302254 4302254 PRJNA494251_P_NODE_34224_length_258_cov_1.664865_g33910_i0 PRJNA494251 34224 258 1.664865 4.2953517 Spizellomyces punctatus 109760 Fungi Fungi 71.3 6.48e-8   NTclustered gi|1026971811|ref|XM_016751649.1| 645134 g33910 i0 100 1.51550387596899 38 0 15 0 221 258 492 455 Spizellomyces punctatus DAOM BR117 40S ribosomal protein S23 (SPPG_03379), mRNA blastn 391 71.3 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces punctatus
5578849 5578849 PRJNA494251_P_NODE_27005_length_283_cov_1.133333_g26691_i0 PRJNA494251 27005 283 1.133333 3.20733239 Spizellomyces punctatus 109760 Fungi Fungi 52.8 0.026   NTclustered gi|1026968390|ref|XM_016751346.1| 645134 g26691 i0 100 0.0989399293286219 28 0 10 0 236 263 2660 2687 Spizellomyces punctatus DAOM BR117 uncharacterized protein (SPPG_03061), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces punctatus
11953904 11953904 PRJNA494251_P_NODE_17450_length_335_cov_3.969466_g17136_i0 PRJNA494251 17450 335 3.969466 13.2977111 Synchytrium microbalum 1806994 Fungi Fungi 143 1.82e-29   NTclustered gi|1759151272|ref|XM_031169209.1| 1806994 g17136 i0 84.247 21.910447761194 146 23 44 0 181 326 482 337 Synchytrium microbalum uncharacterized protein (SmJEL517_g03281), partial mRNA blastn 7340 143 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Synchytriales Synchytriaceae Synchytrium Synchytrium microbalum
13229026 13229026 PRJNA494251_P_NODE_18531_length_327_cov_11.362205_g18217_i0 PRJNA494251 18531 327 11.362205 37.15441035 Polychytrium aggregatum 110093 Fungi Fungi 121 8.309999999999999e-23   NTclustered gi|2432138713|ref|XM_053107478.1| 110093 g18217 i0 84.252 6.56574923547401 127 16 38 3 175 299 148 24 Polychytrium aggregatum large subunit ribosomal protein 29 (BJ171DRAFT_421272), partial mRNA blastn 2147 121 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
15777778 15777778 PRJNA494251_P_NODE_17573_length_335_cov_0.881679_g17259_i0 PRJNA494251 17573 335 0.881679 2.95362465 Fimicolochytrium jonesii 1396493 Fungi Fungi 139 2.36e-28   NTclustered gi|2432050258|ref|XM_053069071.1| 1396493 g17259 i0 82.036 36.9791044776119 167 26 49 4 37 201 162 326 Fimicolochytrium jonesii component of cytosolic 80S ribosome and 40S small subunit (EV422DRAFT_512505), mRNA blastn 12388 139 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Fimicolochytrium Fimicolochytrium jonesii
15777957 15777957 PRJNA494251_P_NODE_31073_length_268_cov_1.579487_g30759_i0 PRJNA494251 31073 268 1.579487 4.23302516 Polychytrium aggregatum 110093 Fungi Fungi 303 6.14e-78   NTclustered gi|2432131711|ref|XM_053109357.1| 110093 g30759 i0 88.189 92.8470149253731 254 30 95 0 1 254 379 126 Polychytrium aggregatum calmodulin (BJ171DRAFT_488251), mRNA blastn 24883 303 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
17052693 17052693 PRJNA494251_P_NODE_3254_length_685_cov_5.692810_g2978_i0 PRJNA494251 3254 685 5.69281 38.9957485 Polychytrium aggregatum 110093 Fungi Fungi 200 2.31e-46   NTclustered gi|2432162630|ref|XM_053112000.1| 110093 g2978 i0 76.485 20.3255474452555 404 73 58 16 77 472 134 523 Polychytrium aggregatum ribosomal protein L22/L17 (BJ171DRAFT_515986), mRNA blastn 13923 200 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
17052945 17052945 PRJNA494251_P_NODE_7854_length_467_cov_32.162437_g7551_i0 PRJNA494251 7854 467 32.162437 150.19858079 Fimicolochytrium jonesii 1396493 Fungi Fungi 128 7.3299999999999985e-25   NTclustered gi|2432097581|ref|XM_053071233.1| 1396493 g7551 i0 82.313 4.17558886509636 147 26 31 0 34 180 83 229 Fimicolochytrium jonesii 30S ribosomal protein S30e (EV422DRAFT_541825), mRNA blastn 1950 128 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Fimicolochytrium Fimicolochytrium jonesii
18327261 18327261 PRJNA494251_P_NODE_7095_length_489_cov_4.182692_g6792_i0 PRJNA494251 7095 489 4.182692 20.45336388 Polychytrium aggregatum 110093 Fungi Fungi 388 3.2e-103   NTclustered gi|2432143306|ref|XM_053110608.1| 110093 g6792 i0 84.029 80.5132924335378 407 61 83 4 31 435 540 136 Polychytrium aggregatum putative 40S ribosomal protein RPS14 (BJ171DRAFT_500769), mRNA blastn 39371 388 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
22151800 22151800 PRJNA494251_P_NODE_218_length_1948_cov_10.080000_g180_i0 PRJNA494251 218 1948 10.08 196.3584 Polychytrium aggregatum 110093 Fungi Fungi 859 0   NTclustered gi|2432166554|ref|XM_053112251.1| 110093 g180 i0 79.365 58.0672484599589 1260 231 64 20 209 1446 279 1531 Polychytrium aggregatum P-loop containing nucleoside triphosphate hydrolase protein (BJ171DRAFT_518510), mRNA blastn 113115 859 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
23427968 23427968 PRJNA494251_P_NODE_51079_length_233_cov_2.037500_g50765_i0 PRJNA494251 51079 233 2.0375 4.747375 Polychytrium aggregatum 110093 Fungi Fungi 106 1.58e-18   NTclustered gi|2432142696|ref|XM_053114809.1| 110093 g50765 i0 82.09 6.6137339055794 134 15 58 3 4 137 254 130 Polychytrium aggregatum malate dehydrogenase, NAD-dependent (BJ171DRAFT_598094), mRNA blastn 1541 106 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
23428060 23428060 PRJNA494251_S_NODE_39_length_990_cov_12.714286_g24_i0 PRJNA494251 39 990 12.714286 125.8714314 Dendrochytridium crassum 1352835 Fungi Fungi 195 1.58e-44   NTclustered gi|82398285|gb|DQ273785.1| 1352835 g24 i0 88.485 16.2313131313131 165 14 16 5 324 486 2009 1848 Dendrochytridium crassum isolate AFTOL-ID 41 28S ribosomal RNA gene, partial sequence blastn 16069 195 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytridiaceae Dendrochytridium Dendrochytridium crassum
24701154 24701154 PRJNA494251_P_NODE_1820_length_879_cov_3.008685_g1594_i0 PRJNA494251 1820 879 3.008685 26.44634115 Polychytrium aggregatum 110093 Fungi Fungi 355 6.03e-93   NTclustered gi|2432166554|ref|XM_053112251.1| 110093 g1594 i0 75.946 72.5858930602958 740 150 83 21 154 879 283 1008 Polychytrium aggregatum P-loop containing nucleoside triphosphate hydrolase protein (BJ171DRAFT_518510), mRNA blastn 63803 355 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;