RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

19 rows where analysis = "blastn", bioproject = "PRJNA494251" and tax_phylum = "Cercozoa"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 19 ✖

tax_clade 1

bioproject 1

  • PRJNA494251 · 19 ✖

analysis 1

  • blastn · 19 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3026243 3026243 PRJNA494251_P_NODE_28943_length_275_cov_6.168317_g28629_i0 PRJNA494251 28943 275 6.168317 16.96287175 Protaspis grandis 361427 SAR_Eukaryotes SAR_Eukaryotes 244 3.88e-60   NTclustered gi|290760486|gb|GQ144689.1| 361427 g28629 i0 82.971 40.7054545454545 276 41 99 5 2 272 2304 2030 Protaspis grandis large subunit ribosomal RNA gene, partial sequence blastn 11194 244 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida Thaumatomastigidae Protaspis Protaspis grandis
4302495 4302495 PRJNA494251_P_NODE_8164_length_460_cov_3.131783_g7861_i0 PRJNA494251 8164 460 3.131783 14.4062018 Lecythium sp. 3678_261K 238773 SAR_Eukaryotes SAR_Eukaryotes 601 3.5299999999999995e-167   NTclustered gi|33089893|gb|AY283756.1| 238773 g7861 i0 90.217 93.8217391304348 460 45 100 0 1 460 150 609 Lecythium sp. 3678_261K actin gene, partial cds blastn 43158 601 1 Eukaryota Sar   Cercozoa Thecofilosea Tectofilosida Chlamydophryidae Lecythium Lecythium sp. 3678_261K
6852736 6852736 PRJNA494251_P_NODE_11246_length_402_cov_6.170213_g10940_i0 PRJNA494251 11246 402 6.170213 24.80425626 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 385 3.35e-102   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g10940 i0 85.6 54.863184079602 375 44 92 10 33 402 4039 3670 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 22055 385 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
6852741 6852741 PRJNA494251_P_NODE_11666_length_396_cov_2.712074_g11360_i0 PRJNA494251 11666 396 2.712074 10.73981304 Lecythium sp. 3678_261K 238773 SAR_Eukaryotes SAR_Eukaryotes 198 4.6e-46   NTclustered gi|33089893|gb|AY283756.1| 238773 g11360 i0 93.893 42.2626262626263 131 8 33 0 3 133 638 768 Lecythium sp. 3678_261K actin gene, partial cds blastn 16736 198 1 Eukaryota Sar   Cercozoa Thecofilosea Tectofilosida Chlamydophryidae Lecythium Lecythium sp. 3678_261K
6853249 6853249 PRJNA494251_P_NODE_8486_length_453_cov_4.473684_g8182_i0 PRJNA494251 8486 453 4.473684 20.26578852 Homocognata cf. vulgaris 2231174 SAR_Eukaryotes SAR_Eukaryotes 411 6.289999999999999e-110   NTclustered gi|1402550492|gb|MH488778.1| 2231174 g8182 i0 84.471 90.3112582781457 425 56 93 6 30 451 2933 2516 Homocognata cf. vulgaris isolate CGS2A sequence blastn 40911 411 1 Eukaryota Sar   Cercozoa       Homocognata Homocognata cf. vulgaris
9403335 9403335 PRJNA494251_P_NODE_31828_length_265_cov_8.489583_g31514_i0 PRJNA494251 31828 265 8.489583 22.49739495 Amorphochlora amoebiformis 1561963 SAR_Eukaryotes SAR_Eukaryotes 267 7.949999999999999e-67   NTclustered gi|33346934|gb|AY251797.1| 1561963 g31514 i0 88.584 74.9056603773585 219 25 83 0 47 265 226 444 Lotharella amoeboformis ubiquitin/actin fusion protein 2 gene, partial cds blastn 19850 267 1 Eukaryota Sar   Cercozoa Chlorarachniophyceae     Amorphochlora Amorphochlora amoebiformis
10678895 10678895 PRJNA494251_P_NODE_26529_length_284_cov_3.033175_g26215_i0 PRJNA494251 26529 284 3.033175 8.614217 Sandona mutans 563755 SAR_Eukaryotes SAR_Eukaryotes 525 1.2899999999999994e-144   NTclustered gi|2163362299|dbj|LC663795.1| 563755 g26215 i0 100 100.707746478873 284 0 100 0 1 284 1539 1256 Sandona mutans Flagella An1019C gene for 18S rRNA, partial sequence blastn 28601 525 1 Eukaryota Sar   Cercozoa   Glissomonadida Sandonidae Sandona Sandona mutans
10678938 10678938 PRJNA494251_P_NODE_30069_length_271_cov_3.000000_g29755_i0 PRJNA494251 30069 271 3 8.13 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 154 6.62e-33   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g29755 i0 84.568 7.60885608856089 162 18 58 6 114 271 3900 3742 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 2062 154 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
13228989 13228989 PRJNA494251_P_NODE_15951_length_348_cov_4.250909_g15638_i0 PRJNA494251 15951 348 4.250909 14.79316332 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 211 5.14e-50   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g15638 i0 86.598 47.801724137931 194 22 55 4 158 348 3901 3709 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 16635 211 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
13229010 13229010 PRJNA494251_P_NODE_17411_length_336_cov_1.376426_g17097_i0 PRJNA494251 17411 336 1.376426 4.62479136 Protaspis grandis 361427 SAR_Eukaryotes SAR_Eukaryotes 433 9.689999999999998e-117   NTclustered gi|290760486|gb|GQ144689.1| 361427 g17097 i0 90.741 97.0178571428571 324 30 96 0 1 324 2069 1746 Protaspis grandis large subunit ribosomal RNA gene, partial sequence blastn 32598 433 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida Thaumatomastigidae Protaspis Protaspis grandis
13229029 13229029 PRJNA494251_P_NODE_1891_length_865_cov_34.900253_g1661_i0 PRJNA494251 1891 865 34.900253 301.88718845 Lecythium sp. 3678_261K 238773 SAR_Eukaryotes SAR_Eukaryotes 968 0   NTclustered gi|33089893|gb|AY283756.1| 238773 g1661 i0 91.583 71.321387283237 701 59 81 0 1 701 68 768 Lecythium sp. 3678_261K actin gene, partial cds blastn 61693 968 1 Eukaryota Sar   Cercozoa Thecofilosea Tectofilosida Chlamydophryidae Lecythium Lecythium sp. 3678_261K
14504388 14504388 PRJNA494251_S_NODE_712_length_256_cov_1.262295_g697_i0 PRJNA494251 712 256 1.262295 3.2314752 Heteromita globosa 45107 SAR_Eukaryotes SAR_Eukaryotes 255 1.65e-63   NTclustered gi|238617605|gb|FJ973380.1| 45107 g697 i0 85.542 45.47265625 249 30 95 3 14 256 1631 1879 Heteromita globosa strain ATCC 50780 28S ribosomal RNA gene, partial sequence blastn 11641 255 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
15778260 15778260 PRJNA494251_P_NODE_9013_length_442_cov_5.482385_g8709_i0 PRJNA494251 9013 442 5.482385 24.2321417 Protaspis grandis 361427 SAR_Eukaryotes SAR_Eukaryotes 577 5.699999999999998e-160   NTclustered gi|290760486|gb|GQ144689.1| 361427 g8709 i0 90.293 100.599547511312 443 40 100 3 1 442 2069 1629 Protaspis grandis large subunit ribosomal RNA gene, partial sequence blastn 44465 577 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida Thaumatomastigidae Protaspis Protaspis grandis
16409644 16409644 PRJNA494251_S_NODE_653_length_266_cov_0.129534_g638_i0 PRJNA494251 653 266 0.129534 0.34456044 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 468 2.04e-127   NTclustered gi|219524794|gb|EU709157.1| 175275 g638 i0 100 95.1127819548872 253 0 95 0 1 253 866 614 Uncultured cercozoan isolate HetPan9 18S ribosomal RNA gene, partial sequence blastn 25300 468 1 Eukaryota Sar   Cercozoa         uncultured Cercozoa
18958499 18958499 PRJNA494251_P_NODE_51895_length_226_cov_2.718954_g51581_i0 PRJNA494251 51895 226 2.718954 6.14483604 root 1 Root_unresolved Root_unresolved 54.7 0.006   NTclustered gi|238617605|gb|FJ973380.1| 45107 g51581 i0 94.286 11.8849557522124 35 2 15 0 1 35 2383 2349 Heteromita globosa strain ATCC 50780 28S ribosomal RNA gene, partial sequence blastn 2686 54.7 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
19600974 19600974 PRJNA494251_P_NODE_10736_length_410_cov_5.139466_g10430_i0 PRJNA494251 10736 410 5.139466 21.0718106 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 219 3.67e-52   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g10430 i0 83.898 49.3024390243902 236 30 56 7 180 410 3901 3669 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 20214 219 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
20877448 20877448 PRJNA494251_S_NODE_737_length_253_cov_1.500000_g722_i0 PRJNA494251 737 253 1.5 3.795 Heteromita sp. PRA-74 323453 SAR_Eukaryotes SAR_Eukaryotes 178 3.63e-40   NTclustered gi|301014702|gb|GQ377715.1| 323453 g722 i0 83.077 12.4703557312253 195 33 77 0 14 208 282 476 Heteromita sp. PRA-74 ribosomal protein S23a (rps23a) mRNA, complete cds blastn 3155 178 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita sp. PRA-74
23427955 23427955 PRJNA494251_P_NODE_50059_length_241_cov_0.916667_g49745_i0 PRJNA494251 50059 241 0.916667 2.20916747 Euglypha rotunda 39714 SAR_Eukaryotes SAR_Eukaryotes 198 2.63e-46   NTclustered gi|27734382|gb|AY099146.1| 39714 g49745 i0 84.39 119.419087136929 205 28 84 4 9 211 394 192 Euglypha rotunda isolate pub1 polyubiquitin gene, partial cds blastn 28780 198 1 Eukaryota Sar   Cercozoa Imbricatea Euglyphida Euglyphidae Euglypha Euglypha rotunda
24701534 24701534 PRJNA494251_P_NODE_52160_length_217_cov_4.916667_g51846_i0 PRJNA494251 52160 217 4.916667 10.66916739 Cryothecomonas sp. APCC MC5-1Cryo 741088 SAR_Eukaryotes SAR_Eukaryotes 241 3.81e-59   NTclustered gi|290760480|gb|GQ144683.1| 741088 g51846 i0 86.758 71.4055299539171 219 25 100 4 1 217 2576 2792 Cryothecomonas sp. APCC MC5-1Cryo large subunit ribosomal RNA gene, partial sequence blastn 15495 241 1 Eukaryota Sar   Cercozoa Thecofilosea Cryomonadida Protaspidae Cryothecomonas Cryothecomonas sp. APCC MC5-1Cryo

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;