RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA494251" and tax_phylum = "Bryozoa"

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tax_superkingdom 1

tax_phylum 1

  • Bryozoa · 5 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA494251 · 5 ✖

analysis 1

  • blastn · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
475369 475369 PRJNA494251_P_NODE_2681_length_742_cov_5.022422_g2416_i0 PRJNA494251 2681 742 5.022422 37.26637124 Membranipora membranacea 95170 Bryozoa other_Eukaryota 414 8.23e-111   NTclustered gi|2320635325|gb|ON868447.1| 95170 g2416 i0 84.487 57.6212938005391 419 65 56 0 84 502 436 18 Membranipora membranacea calmodulin-like protein 1 mRNA, complete cds blastn 42755 414 1 Eukaryota Opisthokonta Metazoa Bryozoa Gymnolaemata Cheilostomatida Membraniporidae Membranipora Membranipora membranacea
4302197 4302197 PRJNA494251_P_NODE_2884_length_719_cov_4.383901_g2615_i0 PRJNA494251 2884 719 4.383901 31.52024819 Membranipora membranacea 95170 Bryozoa other_Eukaryota 556 1.2499999999999996e-153   NTclustered gi|2320635325|gb|ON868447.1| 95170 g2615 i0 88.767 61.0125173852573 454 51 63 0 241 694 19 472 Membranipora membranacea calmodulin-like protein 1 mRNA, complete cds blastn 43868 556 1 Eukaryota Opisthokonta Metazoa Bryozoa Gymnolaemata Cheilostomatida Membraniporidae Membranipora Membranipora membranacea
5578634 5578634 PRJNA494251_P_NODE_10085_length_421_cov_8.589080_g9779_i0 PRJNA494251 10085 421 8.58908 36.1600268 Membranipora membranacea 95170 Bryozoa other_Eukaryota 239 2.9e-58   NTclustered gi|2320635325|gb|ON868447.1| 95170 g9779 i0 87.44 49.5605700712589 207 26 49 0 215 421 18 224 Membranipora membranacea calmodulin-like protein 1 mRNA, complete cds blastn 20865 239 1 Eukaryota Opisthokonta Metazoa Bryozoa Gymnolaemata Cheilostomatida Membraniporidae Membranipora Membranipora membranacea
6852884 6852884 PRJNA494251_P_NODE_21906_length_306_cov_1.763948_g21592_i0 PRJNA494251 21906 306 1.763948 5.39768088 Watersipora subatra 2589382 Bryozoa other_Eukaryota 191 5.799999999999998e-44   NTclustered gi|2795733507|ref|XM_068090781.1| 2589382 g21592 i0 78.767 28.7222222222222 292 56 94 6 12 300 743 1031 PREDICTED: Watersipora subatra V-type proton ATPase subunit B (LOC137404554), mRNA blastn 8789 191 1 Eukaryota Opisthokonta Metazoa Bryozoa Gymnolaemata Cheilostomatida Watersiporidae Watersipora Watersipora subatra
14504002 14504002 PRJNA494251_P_NODE_24992_length_291_cov_1.059633_g24678_i0 PRJNA494251 24992 291 1.059633 3.08353203 Watersipora subatra 2589382 Bryozoa other_Eukaryota 183 9.16e-42   NTclustered gi|2795680188|ref|XM_068072355.1| 2589382 g24678 i0 78.125 22.5773195876289 288 63 99 0 4 291 979 692 PREDICTED: Watersipora subatra eukaryotic peptide chain release factor subunit 1 (LOC137385793), mRNA blastn 6570 183 1 Eukaryota Opisthokonta Metazoa Bryozoa Gymnolaemata Cheilostomatida Watersiporidae Watersipora Watersipora subatra

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;