RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA494251" and tax_kingdom = "Bamfordvirae"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Bamfordvirae · 7 ✖

bioproject 1

  • PRJNA494251 · 7 ✖

analysis 1

  • blastn · 7 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
475474 475474 PRJNA494251_P_NODE_36841_length_251_cov_1.202247_g36527_i0 PRJNA494251 36841 251 1.202247 3.01763997 Hokovirus HKV1 1977638 Viruses Viruses 237 5.85e-58   NTclustered gi|1174571674|gb|KY684104.1| 1977638 g36527 i0 87.143 130.266932270916 210 25 83 2 1 209 162616 162824 Hokovirus HKV1 isolate HKV1 clone Hokovirus_2, sequence blastn 32697 237 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Hokovirus Hokovirus HKV1
1750329 1750329 PRJNA494251_P_NODE_35162_length_255_cov_2.346154_g34848_i0 PRJNA494251 35162 255 2.346154 5.9826927 Phaeovirus unasiliculosus 3431618 Viruses Viruses 71.3 6.4e-8   NTclustered gi|13177282|gb|AF204951.2| 37665 g34848 i0 97.561 2.67450980392157 41 1 16 0 100 140 226797 226837 Ectocarpus siliculosus virus, complete genome blastn 682 71.3 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Algavirales Phycodnaviridae Phaeovirus Phaeovirus unasiliculosus
13229474 13229474 PRJNA494251_S_NODE_771_length_248_cov_3066.222857_g756_i0 PRJNA494251 771 248 3066.222857 7604.23268536 Parapoxvirus orf 3431389 Viruses Viruses 128 3.62e-25   NTclustered gi|2755084441|gb|PP943425.1| 10258 g756 i0 92.473 47.8548387096774 93 2 37 4 7 97 67736 67825 Orf virus isolate FX10, partial genome blastn 11868 128 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae Parapoxvirus Parapoxvirus orf
15778067 15778067 PRJNA494251_P_NODE_40433_length_248_cov_0.880000_g40119_i0 PRJNA494251 40433 248 0.88 2.1824 Medusavirus sp. 'euryale' 3349365 Viruses Viruses 56.5 0.002   NTclustered gi|2835536555|dbj|LC847964.1| 3349365 g40119 i0 96.97 0.133064516129032 33 1 13 0 216 248 111581 111613 Medusavirus sp. 'euryale' F10 DNA, nearly complete sequence blastn 33 56.5 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes   Mamonoviridae Medusavirus Medusavirus sp. 'euryale'
18327319 18327319 PRJNA494251_S_NODE_55_length_825_cov_9.723404_g40_i0 PRJNA494251 55 825 9.723404 80.218083 Parapoxvirus orf 3431389 Viruses Viruses 117 2.9e-21   NTclustered gi|2755084441|gb|PP943425.1| 10258 g40 i0 90.426 9.99393939393939 94 2 11 4 729 819 67825 67736 Orf virus isolate FX10, partial genome blastn 8245 117 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae Parapoxvirus Parapoxvirus orf
22152214 22152214 PRJNA494251_S_NODE_98_length_614_cov_36.201479_g83_i0 PRJNA494251 98 614 36.201479 222.27708106 Parapoxvirus orf 3431389 Viruses Viruses 124 1.2699999999999999e-23   NTclustered gi|2755084441|gb|PP943425.1| 10258 g83 i0 91.489 14.0586319218241 94 3 15 4 2 93 67736 67826 Orf virus isolate FX10, partial genome blastn 8632 124 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae Parapoxvirus Parapoxvirus orf
23428057 23428057 PRJNA494251_S_NODE_319_length_378_cov_47.114754_g304_i0 PRJNA494251 319 378 47.114754 178.09377012 Parapoxvirus orf 3431389 Viruses Viruses 124 7.52e-24   NTclustered gi|2755084441|gb|PP943425.1| 10258 g304 i0 91.398 21.150793650793705 93 5 24 2 7 98 67736 67826 Orf virus isolate FX10, partial genome blastn 7995 124 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae Parapoxvirus Parapoxvirus orf

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;