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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA494251" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 6 ✖

bioproject 1

  • PRJNA494251 · 6 ✖

analysis 1

  • blastn · 6 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3026020 3026020 PRJNA494251_P_NODE_12223_length_389_cov_0.974684_g11916_i0 PRJNA494251 12223 389 0.974684 3.79152076 Candidatus Pacebacteria bacterium GW2011_GWB1_47_8 1618470 Bacteria Bacteria 100 1.31e-16   NTclustered gi|1118703619|gb|KX123532.1| 1618470 g11916 i0 82.883 23.9228791773779 111 19 29 0 99 209 767 657 Candidatus Pacebacteria bacterium GW2011_GWB1_47_8 16S ribosomal RNA gene, partial sequence blastn 9306 100 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Candidatus Pacebacteria bacterium GW2011_GWB1_47_8
10679013 10679013 PRJNA494251_P_NODE_34889_length_256_cov_1.803279_g34575_i0 PRJNA494251 34889 256 1.803279 4.61639424 Candidatus Nanosynbacter sp. HMT-348_TM7c-JB 2933970 Bacteria Bacteria 464 2.52e-126   NTclustered gi|2179907571|gb|CP090820.1| 2933970 g34575 i0 99.606 239.48046875 254 1 99 0 3 256 138225 138478 MAG: Candidatus Nanosynbacter sp. HMT-348_TM7c-JB isolate JCVI_32_bin.19 chromosome, complete genome blastn 61307 464 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Nanosynbacterales Candidatus Nanosynbacteraceae Candidatus Nanosynbacter Candidatus Nanosynbacter sp. HMT-348_TM7c-JB
12585855 12585855 PRJNA494251_P_NODE_52030_length_223_cov_4.533333_g51716_i0 PRJNA494251 52030 223 4.533333 10.10933259 Candidatus Saccharimonadota 95818 Bacteria Bacteria 296 8.28e-76   NTclustered gi|2070586293|gb|CP076101.2| 1917697 g51716 i0 91.705 159.641255605381 217 13 99 5 4 218 115256 115469 MAG: Candidatus Saccharimonas sp. isolate JCVI_32_bin.49 chromosome, complete genome blastn 35600 298 0.993288590604027 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales Candidatus Saccharimonadaceae Candidatus Saccharimonas Candidatus Saccharimonas sp.
17052784 17052784 PRJNA494251_P_NODE_4074_length_623_cov_2.487273_g3784_i0 PRJNA494251 4074 623 2.487273 15.49571079 Candidatus Gracilibacteria bacterium 28_42_T64 1862133 Bacteria Bacteria 348 7.040000000000001e-91   NTclustered gi|1769783243|gb|CP042461.1| 1862133 g3784 i0 79.487 20.0417335473515 507 90 80 13 95 594 1165738 1165239 Candidatus Gracilibacteria bacterium 28_42_T64 chromosome, complete genome blastn 12486 348 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Gracilibacteria bacterium 28_42_T64
19601402 19601402 PRJNA494251_P_NODE_44576_length_245_cov_0.895349_g44262_i0 PRJNA494251 44576 245 0.895349 2.19360505 Candidatus Gracilibacteria bacterium 28_42_T64 1862133 Bacteria Bacteria 281 2.59e-71   NTclustered gi|1769783243|gb|CP042461.1| 1862133 g44262 i0 88.745 4.64081632653061 231 24 94 2 1 231 1252129 1251901 Candidatus Gracilibacteria bacterium 28_42_T64 chromosome, complete genome blastn 1137 281 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Gracilibacteria bacterium 28_42_T64
20877199 20877199 PRJNA494251_P_NODE_38157_length_250_cov_0.870056_g37843_i0 PRJNA494251 38157 250 0.870056 2.17514 Candidatus Gracilibacteria bacterium 28_42_T64 1862133 Bacteria Bacteria 137 6.08e-28   NTclustered gi|1769783243|gb|CP042461.1| 1862133 g37843 i0 81.25 1.412 176 28 69 5 1 172 174077 174251 Candidatus Gracilibacteria bacterium 28_42_T64 chromosome, complete genome blastn 353 137 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Gracilibacteria bacterium 28_42_T64

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;