RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA493828" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA493828 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4301461 4301461 PRJNA493828_P_NODE_20364_length_286_cov_1.896714_g19945_i0 PRJNA493828 20364 286 1.896714 5.42460204 Acaulopage sp. 1979220 Fungi Fungi 477 3.679999999999999e-130   NTclustered gi|2526381194|gb|OR194549.1| 1979220 g19945 i0 96.853 47.6083916083916 286 7 100 1 1 286 2420 2703 Acaulopage sp. strain Amp9 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 13616 477 1 Eukaryota Opisthokonta Fungi Zoopagomycota Zoopagomycetes Zoopagales Zoopagaceae Acaulopage Acaulopage sp.
6852686 6852686 PRJNA493828_P_NODE_7526_length_408_cov_7.014925_g7112_i0 PRJNA493828 7526 408 7.014925 28.620894 Entomophaga aulicae 39303 Fungi Fungi 89.8 2.99e-13   NTclustered gi|1373048|gb|U35394.1|EAU35394 39303 g7112 i0 83.673 18.1323529411765 98 12 23 3 207 301 3579 3675 Entomophaga aulicae 18S, ITS-1, 5.8S, ITS-2, and 25S ribosomal RNA genes blastn 7398 89.8 1 Eukaryota Opisthokonta Fungi Zoopagomycota Entomophthoromycetes Entomophthorales Entomophthoraceae Entomophaga Entomophaga aulicae
14503655 14503655 PRJNA493828_P_NODE_44692_length_221_cov_16.682432_g44273_i0 PRJNA493828 44692 221 16.682432 36.86817472 Basidiobolus ranarum 34480 Fungi Fungi 231 2.34e-56   NTclustered gi|82398540|gb|DQ273807.1| 34480 g44273 i0 86.425 99.1266968325792 221 19 100 7 1 221 1101 1310 Basidiobolus ranarum isolate AFTOL-ID 301 28S ribosomal RNA gene, partial sequence blastn 21907 231 1 Eukaryota Opisthokonta Fungi Zoopagomycota Basidiobolomycetes Basidiobolales Basidiobolaceae Basidiobolus Basidiobolus ranarum
24058508 24058508 PRJNA493828_P_NODE_38439_length_242_cov_2.887574_g38020_i0 PRJNA493828 38439 242 2.887574 6.98792908 Neozygites 150350 Fungi Fungi 309 1.17e-79   NTclustered gi|747039530|gb|KM386989.1| 1597916 g38020 i0 97.253 5.97520661157025 182 5 75 0 5 186 638 819 Neozygites sp. N51 18S ribosomal RNA gene, partial sequence blastn 1446 309 1 Eukaryota Opisthokonta Fungi Zoopagomycota Neozygitomycetes Neozygitales Neozygitaceae Neozygites Neozygites sp. N51

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;