contig_metadata
16 rows where analysis = "blastn", bioproject = "PRJNA493828" and tax_phylum = "Myxococcota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3025395 | 3025395 | PRJNA493828_P_NODE_16683_length_306_cov_4.879828_g16264_i0 | PRJNA493828 | 16683 | 306 | 4.879828 | 14.93227368 | Archangium violaceum | 83451 | Bacteria | Bacteria | 333 | 9.1e-87 | NTclustered | gi|2579675135|gb|CP043493.1| | 83451 | g16264 | i0 | 87.205 | 190.212418300654 | 297 | 32 | 96 | 2 | 1 | 295 | 5180818 | 5181110 | Archangium violaceum strain Cbvi 34 chromosome, complete genome | blastn | 58205 | 333 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Archangium | Archangium violaceum | ||
| 4301706 | 4301706 | PRJNA493828_P_NODE_37084_length_244_cov_1.619883_g36665_i0 | PRJNA493828 | 37084 | 244 | 1.619883 | 3.95251452 | Pyxidicoccus parkwayensis | 2813578 | Bacteria | Bacteria | 396 | 8.829999999999997e-106 | NTclustered | gi|1998505907|gb|CP071090.1| | 2813578 | g36665 | i0 | 95.902 | 224.827868852459 | 244 | 10 | 100 | 0 | 1 | 244 | 2160609 | 2160852 | Pyxidicoccus parkwaysis strain SCPEA02 chromosome | blastn | 54858 | 396 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Pyxidicoccus | Pyxidicoccus parkwayensis | ||
| 8127773 | 8127773 | PRJNA493828_P_NODE_29787_length_256_cov_4.710383_g29368_i0 | PRJNA493828 | 29787 | 256 | 4.710383 | 12.05858048 | Myxococcales bacterium | 2026763 | Bacteria | Bacteria | 335 | 2.0599999999999993e-87 | NTclustered | gi|1958041644|gb|CP064980.1| | 2026763 | g29368 | i0 | 90.272 | 135.7734375 | 257 | 24 | 100 | 1 | 1 | 256 | 1308248 | 1308504 | Myxococcales bacterium isolate Fred_18-Q3-R57-64_BAT3C.417 chromosome | blastn | 34758 | 335 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium | ||||
| 10035012 | 10035012 | PRJNA493828_P_NODE_29168_length_258_cov_2.329730_g28749_i0 | PRJNA493828 | 29168 | 258 | 2.32973 | 6.0107034 | Haliangium | 162027 | Bacteria | Bacteria | 327 | 3.48e-85 | NTclustered | gi|470485361|ref|NR_076697.1| | 80816 | g28749 | i0 | 89.535 | 44.7519379844961 | 258 | 27 | 100 | 0 | 1 | 258 | 234 | 491 | Haliangium ochraceum strain SMP-2 23S ribosomal RNA gene, complete sequence | blastn | 11546 | 327 | 1 | Bacteria | Pseudomonadati | Myxococcota | Haliangiales | Kofleriaceae | Haliangium | Haliangium ochraceum | |||
| 11953257 | 11953257 | PRJNA493828_P_NODE_18170_length_295_cov_3.427928_g17751_i0 | PRJNA493828 | 18170 | 295 | 3.427928 | 10.1123876 | Myxococcales bacterium | 2026763 | Bacteria | Bacteria | 209 | 1.54e-49 | NTclustered | gi|1958041644|gb|CP064980.1| | 2026763 | g17751 | i0 | 79.661 | 111.345762711864 | 295 | 56 | 99 | 4 | 3 | 295 | 1307913 | 1308205 | Myxococcales bacterium isolate Fred_18-Q3-R57-64_BAT3C.417 chromosome | blastn | 32847 | 209 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium | ||||
| 13228610 | 13228610 | PRJNA493828_P_NODE_33971_length_248_cov_2.548571_g33552_i0 | PRJNA493828 | 33971 | 248 | 2.548571 | 6.32045608 | Corallococcus macrosporus | 35 | Bacteria | Bacteria | 272 | 1.5799999999999996e-68 | NTclustered | gi|1243045502|gb|CP022203.1| | 1189310 | g33552 | i0 | 86.64 | 17.5483870967742 | 247 | 31 | 99 | 2 | 3 | 248 | 5793102 | 5793347 | Corallococcus macrosporus DSM 14697 chromosome, complete genome | blastn | 4352 | 272 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Corallococcus | Corallococcus macrosporus | ||
| 13860247 | 13860247 | PRJNA493828_P_NODE_38651_length_242_cov_1.680473_g38232_i0 | PRJNA493828 | 38651 | 242 | 1.680473 | 4.06674466 | Archangium | 47 | Bacteria | Bacteria | 302 | 1.96e-77 | NTclustered | gi|827418478|gb|CP011509.1| | 48 | g38232 | i0 | 90.708 | 267.090909090909 | 226 | 21 | 93 | 0 | 1 | 226 | 107211 | 106986 | Archangium gephyra strain DSM 2261, complete genome | blastn | 64636 | 302 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Archangium | Archangium gephyra | ||
| 14503315 | 14503315 | PRJNA493828_P_NODE_19532_length_289_cov_1.916667_g19113_i0 | PRJNA493828 | 19532 | 289 | 1.916667 | 5.53916763 | Nannocystis punicea | 2995304 | Bacteria | Bacteria | 396 | 1.0699999999999997e-105 | NTclustered | gi|2415023655|gb|CP114040.1| | 2995304 | g19113 | i0 | 91.409 | 160.141868512111 | 291 | 22 | 100 | 3 | 1 | 289 | 7595998 | 7596287 | Nannocystis poenicansa strain FL3 chromosome, complete genome | blastn | 46281 | 396 | 1 | Bacteria | Pseudomonadati | Myxococcota | Nannocystales | Nannocystaceae | Nannocystis | Nannocystis punicea | |||
| 16409338 | 16409338 | PRJNA493828_P_NODE_44513_length_223_cov_5.260000_g44094_i0 | PRJNA493828 | 44513 | 223 | 5.26 | 11.7298 | Nannocystis | 53 | Bacteria | Bacteria | 255 | 1.41e-63 | NTclustered | gi|2244669|emb|X87286.1| | 54 | g44094 | i0 | 88.318 | 183.201793721973 | 214 | 24 | 96 | 1 | 1 | 213 | 20 | 233 | N.exedens 23S rRNA gene | blastn | 40854 | 255 | 1 | Bacteria | Pseudomonadati | Myxococcota | Nannocystales | Nannocystaceae | Nannocystis | Nannocystis exedens | |||
| 17051969 | 17051969 | PRJNA493828_P_NODE_25014_length_270_cov_3.659898_g24595_i0 | PRJNA493828 | 25014 | 270 | 3.659898 | 9.8817246 | Sandaracinus amylolyticus | 927083 | Bacteria | Bacteria | 383 | 7.73e-102 | NTclustered | gi|2183633570|gb|CP070225.1| | 927083 | g24595 | i0 | 92.222 | 192.962962962963 | 270 | 21 | 100 | 0 | 1 | 270 | 9676406 | 9676675 | Sandaracinus strain MSr10575 (SBSa001) chromosome, complete sequence | blastn | 52100 | 383 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Sandaracinaceae | Sandaracinus | Sandaracinus amylolyticus | |||
| 18326219 | 18326219 | PRJNA493828_P_NODE_19115_length_291_cov_1.412844_g18696_i0 | PRJNA493828 | 19115 | 291 | 1.412844 | 4.11137604 | Sandaracinus amylolyticus | 927083 | Bacteria | Bacteria | 250 | 8.909999999999999e-62 | NTclustered | gi|2183633570|gb|CP070225.1| | 927083 | g18696 | i0 | 85.039 | 59.1786941580756 | 254 | 28 | 86 | 10 | 38 | 286 | 2090651 | 2090403 | Sandaracinus strain MSr10575 (SBSa001) chromosome, complete sequence | blastn | 17221 | 250 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Sandaracinaceae | Sandaracinus | Sandaracinus amylolyticus | |||
| 20232844 | 20232844 | PRJNA493828_P_NODE_18296_length_294_cov_4.977376_g17877_i0 | PRJNA493828 | 18296 | 294 | 4.977376 | 14.63348544 | Myxococcales | 29 | Bacteria | Bacteria | 516 | 8.05e-142 | NTclustered | gi|2579665545|gb|CP043492.1| | 43 | g17877 | i0 | 98.625 | 296.316326530612 | 291 | 4 | 99 | 0 | 1 | 291 | 4450774 | 4450484 | Cystobacter fuscus strain Cbf 8 chromosome, complete genome | blastn | 87117 | 521 | 0.990403071017274 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Cystobacter | Cystobacter fuscus | ||
| 22151115 | 22151115 | PRJNA493828_P_NODE_19538_length_289_cov_1.888889_g19119_i0 | PRJNA493828 | 19538 | 289 | 1.888889 | 5.45888921 | Chondromyces crocatus | 52 | Bacteria | Bacteria | 278 | 4.0500000000000005e-70 | NTclustered | gi|908353314|gb|CP012159.1| | 52 | g19119 | i0 | 85.502 | 92.4429065743945 | 269 | 35 | 94 | 4 | 21 | 285 | 1431123 | 1430855 | Chondromyces crocatus strain Cm c5, complete genome | blastn | 26716 | 278 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Chondromyces | Chondromyces crocatus | |||
| 22151464 | 22151464 | PRJNA493828_P_NODE_42058_length_233_cov_2.750000_g41639_i0 | PRJNA493828 | 42058 | 233 | 2.75 | 6.4075 | Nannocystis sp. | 1962667 | Bacteria | Bacteria | 331 | 2.39e-86 | NTclustered | gi|1386873111|gb|MF774778.1| | 1962667 | g41639 | i0 | 92.982 | 84.5836909871245 | 228 | 15 | 97 | 1 | 1 | 227 | 597 | 370 | Nannocystis sp. strain MNa11734 23S ribosomal RNA gene, partial sequence | blastn | 19708 | 331 | 1 | Bacteria | Pseudomonadati | Myxococcota | Nannocystales | Nannocystaceae | Nannocystis | Nannocystis sp. | |||
| 23427310 | 23427310 | PRJNA493828_P_NODE_40559_length_238_cov_4.606061_g40140_i0 | PRJNA493828 | 40559 | 238 | 4.606061 | 10.96242518 | Archangium violaceum | 83451 | Bacteria | Bacteria | 357 | 4.0499999999999996e-94 | NTclustered | gi|2579675135|gb|CP043493.1| | 83451 | g40140 | i0 | 93.697 | 237.260504201681 | 238 | 15 | 100 | 0 | 1 | 238 | 5179992 | 5180229 | Archangium violaceum strain Cbvi 34 chromosome, complete genome | blastn | 56468 | 357 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Archangium | Archangium violaceum | ||
| 24700387 | 24700387 | PRJNA493828_P_NODE_11440_length_341_cov_1.929104_g11021_i0 | PRJNA493828 | 11440 | 341 | 1.929104 | 6.57824464 | Sandaracinus amylolyticus | 927083 | Bacteria | Bacteria | 468 | 2.7e-127 | NTclustered | gi|2183633570|gb|CP070225.1| | 927083 | g11021 | i0 | 92.145 | 218.061583577713 | 331 | 26 | 97 | 0 | 1 | 331 | 9678393 | 9678723 | Sandaracinus strain MSr10575 (SBSa001) chromosome, complete sequence | blastn | 74359 | 468 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Sandaracinaceae | Sandaracinus | Sandaracinus amylolyticus |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;