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contig_metadata

12 rows where analysis = "blastn", bioproject = "PRJNA493828" and tax_phylum = "Evosea"

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tax_superkingdom 1

tax_phylum 1

  • Evosea · 12 ✖

tax_clade 1

bioproject 1

  • PRJNA493828 · 12 ✖

analysis 1

  • blastn · 12 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1749859 1749859 PRJNA493828_P_NODE_44262_length_225_cov_8.552632_g43843_i0 PRJNA493828 44262 225 8.552632 19.243422 Didymium spongiosum 289992 Evosea other_Eukaryota 171 5.29e-38   NTclustered gi|2161226356|gb|MZ313554.1| 289992 g43843 i0 88.732 4.93333333333333 142 13 63 3 84 224 7194 7333 Mucilago crustacea 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 1110 171 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae Didymium Didymium spongiosum
1749948 1749948 PRJNA493828_P_NODE_6382_length_438_cov_2.778082_g5982_i0 PRJNA493828 6382 438 2.778082 12.16799916 Perichaena dictyonema 2951132 Evosea other_Eukaryota 809 0   NTclustered gi|2250222210|gb|ON713340.1| 2951132 g5982 i0 100 76.8812785388128 438 0 100 0 1 438 775 1212 Perichaena dictyonema voucher MA59057 small subunit ribosomal RNA gene, partial sequence blastn 33674 809 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Trichiida Trichiidae Perichaena Perichaena dictyonema
4301481 4301481 PRJNA493828_P_NODE_21624_length_282_cov_0.976077_g21205_i0 PRJNA493828 21624 282 0.976077 2.75253714 Didymium iridis 5793 Evosea other_Eukaryota 337 6.41e-88   NTclustered gi|2687|emb|X60210.1| 5793 g21205 i0 88.298 15.1595744680851 282 31 99 2 1 280 2011 1730 D.iridis LSU rRNA gene blastn 4275 337 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae Didymium Didymium iridis
9403003 9403003 PRJNA493828_P_NODE_6048_length_449_cov_1.797872_g5655_i0 PRJNA493828 6048 449 1.797872 8.07244528 Fuligo septica 159720 Evosea other_Eukaryota 211 6.78e-50   NTclustered gi|37515398|emb|AJ584697.1| 159720 g5655 i0 94.203 1.17149220489978 138 8 31 0 293 430 14003 13866 Fuligo septica 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2 and 28S rRNA gene, isolate NY-1 blastn 526 211 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Fuligo Fuligo septica
9403018 9403018 PRJNA493828_P_NODE_7008_length_421_cov_20.560345_g6597_i0 PRJNA493828 7008 421 20.560345 86.55905245 uncultured Soliformovum 2510342 Evosea other_Eukaryota 464 4.389999999999999e-126   NTclustered gi|1564356923|gb|MK443523.1| 2510342 g6597 i0 96.441 43.6579572446556 281 10 67 0 4 284 145 425 Uncultured Soliformovum clone OTUA345 small subunit ribosomal RNA gene, partial sequence; mitochondrial blastn 18380 464 1 Eukaryota Amoebozoa   Evosea Variosea Protosteliida Protosteliaceae   uncultured Soliformovum
13228569 13228569 PRJNA493828_P_NODE_31311_length_252_cov_3.826816_g30892_i0 PRJNA493828 31311 252 3.826816 9.64357632 Phalansterium filosum 857046 Evosea other_Eukaryota 169 2.17e-37   NTclustered gi|300078501|gb|GU001163.1| 857046 g30892 i0 79.134 63.6587301587302 254 45 100 7 1 252 2078 1831 Phalansterium sp. EEG-2010/THA 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 16042 169 1 Eukaryota Amoebozoa   Evosea Variosea     Phalansterium Phalansterium filosum
13228911 13228911 PRJNA493828_P_NODE_9751_length_364_cov_5.250859_g9333_i0 PRJNA493828 9751 364 5.250859 19.11312676 Perichaena dictyonema 2951132 Evosea other_Eukaryota 649 0   NTclustered gi|2250222210|gb|ON713340.1| 2951132 g9333 i0 98.898 95.6593406593407 363 4 99 0 1 363 1295 1657 Perichaena dictyonema voucher MA59057 small subunit ribosomal RNA gene, partial sequence blastn 34820 649 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Trichiida Trichiidae Perichaena Perichaena dictyonema
15777478 15777478 PRJNA493828_P_NODE_40053_length_240_cov_3.796407_g39634_i0 PRJNA493828 40053 240 3.796407 9.1113768 Physarum cinereum 289951 Evosea other_Eukaryota 438 1.4199999999999995e-118   NTclustered gi|374255699|emb|HE614599.1| 289951 g39634 i0 99.583 98.0791666666667 240 1 100 0 1 240 354 593 Physarum cinereum partial 18S rRNA gene, strain Idn-2 blastn 23539 438 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum cinereum
17052187 17052187 PRJNA493828_P_NODE_40254_length_239_cov_6.379518_g39835_i0 PRJNA493828 40254 239 6.379518 15.24704802 Perichaena dictyonema 2951132 Evosea other_Eukaryota 420 5.11e-113   NTclustered gi|2250222210|gb|ON713340.1| 2951132 g39835 i0 98.326 52.4225941422594 239 4 100 0 1 239 139 377 Perichaena dictyonema voucher MA59057 small subunit ribosomal RNA gene, partial sequence blastn 12529 420 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Trichiida Trichiidae Perichaena Perichaena dictyonema
18958166 18958166 PRJNA493828_P_NODE_32335_length_250_cov_5.983051_g31916_i0 PRJNA493828 32335 250 5.983051 14.9576275 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 159 1.3e-34   NTclustered gi|300078500|gb|GU001162.1| 136499 g31916 i0 89.844 48.676 128 8 64 3 128 250 3992 3865 Phalansterium solitarium 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 12169 159 1 Eukaryota Amoebozoa   Evosea Variosea     Phalansterium Phalansterium solitarium
20233006 20233006 PRJNA493828_P_NODE_34416_length_248_cov_0.880000_g33997_i0 PRJNA493828 34416 248 0.88 2.1824 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 198 2.7199999999999993e-46   NTclustered gi|290054|gb|L16578.1|DDITATBPA 44689 g33997 i0 82.667 19.4435483870968 225 37 90 2 25 248 1165 942 Dictyostelium discoideum HIV1 TAT-binding protein homologous protein mRNA, complete cds blastn 4822 200 0.99 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
22151317 22151317 PRJNA493828_P_NODE_3158_length_601_cov_3.066288_g2814_i0 PRJNA493828 3158 601 3.066288 18.42839088 Physarum polycephalum 5791 Evosea other_Eukaryota 113 2.69e-20   NTclustered gi|3221|emb|V01159.1| 5791 g2814 i0 77.835 8.00665557404326 194 35 32 6 166 358 2285 2471 Physarum polycephalum gene encoding 5.8S rRNA and 26S rRNA blastn 4812 113 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum polycephalum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;