RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA493828" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA493828 · 7 ✖

analysis 1

  • blastn · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1106630 1106630 PRJNA493828_P_NODE_6241_length_442_cov_4.647696_g5842_i0 PRJNA493828 6241 442 4.647696 20.54281632 Bivalvulida 35583 Cnidaria other_Eukaryota 117 1.49e-21   NTclustered gi|241911749|gb|FJ417055.1| 279112 g5842 i0 88.66 22.0067873303167 97 9 22 2 346 442 2152 2058 Chloromyxum leydigi isolate M0180 28S large subunit ribosomal RNA gene, partial sequence blastn 9727 117 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Chloromyxidae Chloromyxum Chloromyxum leydigi
3025505 3025505 PRJNA493828_P_NODE_22783_length_278_cov_1.136585_g22364_i0 PRJNA493828 22783 278 1.136585 3.1597063 Orbicella faveolata 48498 Cnidaria other_Eukaryota 54.7 0.007   NTclustered gi|1176081934|ref|XM_020755445.1| 48498 g22364 i0 94.444 0.129496402877698 36 1 13 1 72 107 687 721 PREDICTED: Orbicella faveolata cysteine-rich motor neuron 1 protein-like (LOC110049639), mRNA blastn 36 54.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Merulinidae Orbicella Orbicella faveolata
8127949 8127949 PRJNA493828_P_NODE_43167_length_229_cov_2.858974_g42748_i0 PRJNA493828 43167 229 2.858974 6.54705046 Clytia sp. 3 AFC-2016 1886627 Cnidaria other_Eukaryota 80.5 9.37e-11   NTclustered gi|1069323992|gb|KX665509.1| 1886627 g42748 i0 78.169 20.3886462882096 142 20 59 10 92 225 1735 1597 Clytia sp. 3 AFC-2016 voucher MZUSP:2801 28S ribosomal RNA gene, partial sequence blastn 4669 80.5 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Clytiidae Clytia Clytia sp. 3 AFC-2016
10035109 10035109 PRJNA493828_P_NODE_3888_length_548_cov_32.720000_g3510_i0 PRJNA493828 3888 548 32.72 179.3056 Malacalcyonacea 3028843 Cnidaria other_Eukaryota 154 1.4399999999999999e-32   NTclustered gi|8101942|gb|AF262347.1| 51768 g3510 i0 95.789 18.5583941605839 95 4 17 0 443 537 769 675 Alcyonium digitatum 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 10170 154 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Alcyoniidae Alcyonium Alcyonium digitatum
22783763 22783763 PRJNA493828_P_NODE_42958_length_230_cov_2.280255_g42539_i0 PRJNA493828 42958 230 2.280255 5.2445865 Acropora 6127 Cnidaria other_Eukaryota 56.5 0.002   NTclustered gi|2113958730|ref|XM_044308456.1| 45264 g42539 i0 94.595 0.626086956521739 37 1 16 1 53 88 234 198 PREDICTED: Acropora millepora tripartite motif-containing protein 3-like (LOC122948507), mRNA blastn 144 56.5 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Acroporidae Acropora Acropora millepora
23427285 23427285 PRJNA493828_P_NODE_38939_length_242_cov_0.911243_g38520_i0 PRJNA493828 38939 242 0.911243 2.20520806 Montipora foliosa 591990 Cnidaria other_Eukaryota 56.5 0.002   NTclustered gi|2812093292|ref|XR_011116954.1| 591990 g38520 i0 92.308 1.02892561983471 39 3 16 0 203 241 1182 1144 PREDICTED: Montipora foliosa uncharacterized protein (LOC137971316), transcript variant X1, misc_RNA blastn 249 56.5 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Acroporidae Montipora Montipora foliosa
24700920 24700920 PRJNA493828_P_NODE_46780_length_206_cov_4.624060_g46361_i0 PRJNA493828 46780 206 4.62406 9.5255636 Rhopilema esculentum 499914 Cnidaria other_Eukaryota 100 6.34e-17   NTclustered gi|2729058829|ref|XR_010517322.1| 499914 g46361 i0 86.17 1.52427184466019 94 11 46 1 34 127 3608 3517 PREDICTED: Rhopilema esculentum large subunit ribosomal RNA (LOC135695981), rRNA blastn 314 100 1 Eukaryota Opisthokonta Metazoa Cnidaria Scyphozoa Rhizostomeae Rhizostomatidae Rhopilema Rhopilema esculentum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;