contig_metadata
24 rows where analysis = "blastn", bioproject = "PRJNA493828" and tax_phylum = "Bdellovibrionota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 474478 | 474478 | PRJNA493828_P_NODE_11821_length_337_cov_1.026515_g11402_i0 | PRJNA493828 | 11821 | 337 | 1.026515 | 3.45935555 | Bacteriovorax stolpii | 960 | Bacteria | Bacteria | 590 | 5.449999999999998e-164 | NTclustered | gi|1700689994|gb|CP030035.1| | 960 | g11402 | i0 | 98.22 | 187.320474777448 | 337 | 6 | 100 | 0 | 1 | 337 | 1661418 | 1661082 | Bacteriovorax stolpii strain AC01 chromosome, complete genome | blastn | 63127 | 590 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovorax | Bacteriovorax stolpii | ||
| 475016 | 475016 | PRJNA493828_P_NODE_46541_length_207_cov_5.731343_g46122_i0 | PRJNA493828 | 46541 | 207 | 5.731343 | 11.86388001 | Bdellovibrio bacteriovorus | 959 | Bacteria | Bacteria | 320 | 4.5e-83 | NTclustered | gi|2800920897|gb|CP168968.1| | 959 | g46122 | i0 | 94.66 | 222.222222222222 | 206 | 11 | 99 | 0 | 1 | 206 | 778035 | 777830 | Bdellovibrio bacteriovorus strain Bd5 chromosome, complete genome | blastn | 46000 | 320 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 1106662 | 1106662 | PRJNA493828_P_NODE_7861_length_400_cov_4.137615_g7446_i0 | PRJNA493828 | 7861 | 400 | 4.137615 | 16.55046 | Peredibacter | 263370 | Bacteria | Bacteria | 708 | 0 | NTclustered | gi|2631252187|gb|CP139487.1| | 28202 | g7446 | i0 | 98.507 | 239.0975 | 402 | 4 | 100 | 1 | 1 | 400 | 511926 | 511525 | Peredibacter starrii strain A3.12 chromosome, complete genome | blastn | 95639 | 713 | 0.992987377279102 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 1749624 | 1749624 | PRJNA493828_P_NODE_27282_length_263_cov_3.863158_g26863_i0 | PRJNA493828 | 27282 | 263 | 3.863158 | 10.16010554 | Peredibacter starrii | 28202 | Bacteria | Bacteria | 479 | 9.29e-131 | NTclustered | gi|2631252187|gb|CP139487.1| | 28202 | g26863 | i0 | 99.618 | 101.456273764259 | 262 | 1 | 99 | 0 | 2 | 263 | 512164 | 511903 | Peredibacter starrii strain A3.12 chromosome, complete genome | blastn | 26683 | 479 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 3657585 | 3657585 | PRJNA493828_P_NODE_19323_length_290_cov_1.423963_g18904_i0 | PRJNA493828 | 19323 | 290 | 1.423963 | 4.1294927 | Pseudobdellovibrio | 2862745 | Bacteria | Bacteria | 379 | 1.08e-100 | NTclustered | gi|507148233|ref|NR_103040.1| | 453816 | g18904 | i0 | 90.345 | 130 | 290 | 26 | 99 | 2 | 1 | 289 | 309 | 21 | Bdellovibrio exovorus strain JSS 23S ribosomal RNA gene, complete sequence | blastn | 37700 | 379 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrio | Pseudobdellovibrio exovorus | ||
| 3657702 | 3657702 | PRJNA493828_P_NODE_29603_length_257_cov_1.804348_g29184_i0 | PRJNA493828 | 29603 | 257 | 1.804348 | 4.63717436 | Bdellovibrio | 958 | Bacteria | Bacteria | 246 | 9.99e-61 | NTclustered | gi|2800917394|gb|CP168972.1| | 959 | g29184 | i0 | 86.087 | 124.241245136187 | 230 | 30 | 89 | 2 | 28 | 256 | 747864 | 748092 | Bdellovibrio bacteriovorus strain Bd19 chromosome, complete genome | blastn | 31930 | 246 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 5578548 | 5578548 | PRJNA493828_P_NODE_48625_length_196_cov_7.682927_g48206_i0 | PRJNA493828 | 48625 | 196 | 7.682927 | 15.05853692 | Bdellovibrio bacteriovorus | 959 | Bacteria | Bacteria | 237 | 4.36e-58 | NTclustered | gi|2800948966|gb|CP168973.1| | 959 | g48206 | i0 | 90.503 | 181.102040816327 | 179 | 17 | 91 | 0 | 15 | 193 | 1677456 | 1677278 | Bdellovibrio bacteriovorus strain HK2 chromosome, complete genome | blastn | 35496 | 237 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 6852717 | 6852717 | PRJNA493828_P_NODE_9146_length_374_cov_3.810631_g8729_i0 | PRJNA493828 | 9146 | 374 | 3.810631 | 14.25175994 | Bdellovibrio sp. HCB337 | 3394358 | Bacteria | Bacteria | 274 | 6.98e-69 | NTclustered | gi|2895525383|gb|CP178621.1| | 3394358 | g8729 | i0 | 80.495 | 244.379679144385 | 364 | 66 | 96 | 4 | 2 | 361 | 3448038 | 3448400 | Bdellovibrio sp. HCB337 chromosome, complete genome | blastn | 91398 | 274 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. HCB337 | ||
| 8759269 | 8759269 | PRJNA493828_P_NODE_10647_length_351_cov_3.309353_g10228_i0 | PRJNA493828 | 10647 | 351 | 3.309353 | 11.61582903 | Pseudobdellovibrio | 2862745 | Bacteria | Bacteria | 503 | 7.619999999999998e-138 | NTclustered | gi|507148233|ref|NR_103040.1| | 453816 | g10228 | i0 | 92.571 | 84.8062678062678 | 350 | 26 | 99 | 0 | 2 | 351 | 1440 | 1789 | Bdellovibrio exovorus strain JSS 23S ribosomal RNA gene, complete sequence | blastn | 29767 | 503 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrio | Pseudobdellovibrio exovorus | ||
| 8759306 | 8759306 | PRJNA493828_P_NODE_12787_length_326_cov_1.177866_g12368_i0 | PRJNA493828 | 12787 | 326 | 1.177866 | 3.83984316 | Pseudobdellovibrio | 2862745 | Bacteria | Bacteria | 243 | 1.69e-59 | NTclustered | gi|507148233|ref|NR_103040.1| | 453816 | g12368 | i0 | 81.013 | 161.033742331288 | 316 | 51 | 95 | 8 | 10 | 320 | 462 | 151 | Bdellovibrio exovorus strain JSS 23S ribosomal RNA gene, complete sequence | blastn | 52497 | 243 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrio | Pseudobdellovibrio exovorus | ||
| 9402700 | 9402700 | PRJNA493828_P_NODE_30208_length_255_cov_3.362637_g29789_i0 | PRJNA493828 | 30208 | 255 | 3.362637 | 8.57472435 | Peredibacter starrii | 28202 | Bacteria | Bacteria | 433 | 7.08e-117 | NTclustered | gi|2631252187|gb|CP139487.1| | 28202 | g29789 | i0 | 97.255 | 32.7333333333333 | 255 | 7 | 100 | 0 | 1 | 255 | 512492 | 512238 | Peredibacter starrii strain A3.12 chromosome, complete genome | blastn | 8347 | 433 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 10035077 | 10035077 | PRJNA493828_P_NODE_34628_length_247_cov_3.229885_g34209_i0 | PRJNA493828 | 34628 | 247 | 3.229885 | 7.97781595 | Bacteriovorax | 146784 | Bacteria | Bacteria | 457 | 4.05e-124 | NTclustered | gi|1700689994|gb|CP030035.1| | 960 | g34209 | i0 | 100 | 197.121457489879 | 247 | 0 | 100 | 0 | 1 | 247 | 1660824 | 1660578 | Bacteriovorax stolpii strain AC01 chromosome, complete genome | blastn | 48689 | 457 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovorax | Bacteriovorax stolpii | ||
| 10678462 | 10678462 | PRJNA493828_P_NODE_40569_length_238_cov_4.260606_g40150_i0 | PRJNA493828 | 40569 | 238 | 4.260606 | 10.14024228 | Pseudobdellovibrionaceae bacterium | 2026715 | Bacteria | Bacteria | 318 | 1.91e-82 | NTclustered | gi|2258818259|gb|CP060220.1| | 2026715 | g40150 | i0 | 92.76 | 181.924369747899 | 221 | 15 | 93 | 1 | 16 | 236 | 3250971 | 3250752 | MAG: Pseudobdellovibrionaceae bacterium isolate HK-STAS-BDEL-7 chromosome | blastn | 43298 | 318 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrionaceae bacterium | |||
| 11309570 | 11309570 | PRJNA493828_P_NODE_19169_length_290_cov_4.663594_g18750_i0 | PRJNA493828 | 19169 | 290 | 4.663594 | 13.5244226 | Peredibacter | 263370 | Bacteria | Bacteria | 512 | 1.02e-140 | NTclustered | gi|2631252187|gb|CP139487.1| | 28202 | g18750 | i0 | 98.951 | 170.089655172414 | 286 | 3 | 99 | 0 | 4 | 289 | 511221 | 511506 | Peredibacter starrii strain A3.12 chromosome, complete genome | blastn | 49326 | 512 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 13228259 | 13228259 | PRJNA493828_P_NODE_12711_length_326_cov_5.422925_g12292_i0 | PRJNA493828 | 12711 | 326 | 5.422925 | 17.6787355 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 246 | 1.31e-60 | NTclustered | gi|2893356065|emb|OZ220488.1| | 2053517 | g12292 | i0 | 86.607 | 30.5276073619632 | 224 | 28 | 68 | 2 | 32 | 254 | 730260 | 730038 | MAG: Bdellovibrionales bacterium isolate 0d1acec5-ee6a-42a0-9e8e-8bc2840f726d genome assembly, chromosome: 1 | blastn | 9952 | 246 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 13860167 | 13860167 | PRJNA493828_P_NODE_29631_length_257_cov_1.668478_g29212_i0 | PRJNA493828 | 29631 | 257 | 1.668478 | 4.28798846 | Bacteriovorax | 146784 | Bacteria | Bacteria | 464 | 2.5299999999999998e-126 | NTclustered | gi|1700689994|gb|CP030035.1| | 960 | g29212 | i0 | 99.222 | 234.517509727626 | 257 | 2 | 100 | 0 | 1 | 257 | 1660363 | 1660619 | Bacteriovorax stolpii strain AC01 chromosome, complete genome | blastn | 60271 | 464 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovorax | Bacteriovorax stolpii | ||
| 14503450 | 14503450 | PRJNA493828_P_NODE_29752_length_256_cov_8.240437_g29333_i0 | PRJNA493828 | 29752 | 256 | 8.240437 | 21.09551872 | Peredibacter starrii | 28202 | Bacteria | Bacteria | 451 | 1.96e-122 | NTclustered | gi|2631252187|gb|CP139487.1| | 28202 | g29333 | i0 | 98.814 | 128.23046875 | 253 | 3 | 99 | 0 | 1 | 253 | 511238 | 510986 | Peredibacter starrii strain A3.12 chromosome, complete genome | blastn | 32827 | 451 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 14503685 | 14503685 | PRJNA493828_P_NODE_46292_length_209_cov_4.352941_g45873_i0 | PRJNA493828 | 46292 | 209 | 4.352941 | 9.09764669 | Bdellovibrio sp. HCB337 | 3394358 | Bacteria | Bacteria | 267 | 6.01e-67 | NTclustered | gi|2895525383|gb|CP178621.1| | 3394358 | g45873 | i0 | 89.904 | 87.0909090909091 | 208 | 20 | 99 | 1 | 1 | 208 | 3447226 | 3447020 | Bdellovibrio sp. HCB337 chromosome, complete genome | blastn | 18202 | 267 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. HCB337 | ||
| 15134665 | 15134665 | PRJNA493828_P_NODE_36172_length_245_cov_2.726744_g35753_i0 | PRJNA493828 | 36172 | 245 | 2.726744 | 6.6805228 | Bacteriovorax | 146784 | Bacteria | Bacteria | 420 | 5.26e-113 | NTclustered | gi|1700689994|gb|CP030035.1| | 960 | g35753 | i0 | 100 | 309.342857142857 | 227 | 0 | 93 | 0 | 16 | 242 | 1663251 | 1663025 | Bacteriovorax stolpii strain AC01 chromosome, complete genome | blastn | 75789 | 420 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovorax | Bacteriovorax stolpii | ||
| 15134740 | 15134740 | PRJNA493828_P_NODE_44472_length_223_cov_11.493333_g44053_i0 | PRJNA493828 | 44472 | 223 | 11.493333 | 25.63013259 | Peredibacter | 263370 | Bacteria | Bacteria | 353 | 4.849999999999999e-93 | NTclustered | gi|2631252187|gb|CP139487.1| | 28202 | g44053 | i0 | 97.129 | 58.6008968609865 | 209 | 6 | 94 | 0 | 1 | 209 | 513390 | 513598 | Peredibacter starrii strain A3.12 chromosome, complete genome | blastn | 13068 | 353 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 15777157 | 15777157 | PRJNA493828_P_NODE_17753_length_298_cov_2.106667_g17334_i0 | PRJNA493828 | 17753 | 298 | 2.106667 | 6.27786766 | Bdellovibrio sp. HCB337 | 3394358 | Bacteria | Bacteria | 327 | 4.11e-85 | NTclustered | gi|2895525383|gb|CP178621.1| | 3394358 | g17334 | i0 | 86.601 | 112.744966442953 | 306 | 30 | 99 | 9 | 3 | 298 | 3447104 | 3447408 | Bdellovibrio sp. HCB337 chromosome, complete genome | blastn | 33598 | 327 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. HCB337 | ||
| 16409079 | 16409079 | PRJNA493828_P_NODE_20933_length_284_cov_1.872038_g20514_i0 | PRJNA493828 | 20933 | 284 | 1.872038 | 5.31658792 | Bdellovibrio | 958 | Bacteria | Bacteria | 418 | 2.2399999999999995e-112 | NTclustered | gi|2328635023|gb|CP106855.1| | 1732569 | g20514 | i0 | 93.333 | 216.035211267606 | 285 | 16 | 99 | 3 | 2 | 284 | 2945046 | 2945329 | Bdellovibrio sp. SKB1291214 chromosome, complete genome | blastn | 61354 | 418 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. SKB1291214 | ||
| 16409271 | 16409271 | PRJNA493828_P_NODE_37873_length_243_cov_1.447059_g37454_i0 | PRJNA493828 | 37873 | 243 | 1.447059 | 3.51635337 | Peredibacter | 263370 | Bacteria | Bacteria | 370 | 5.32e-98 | NTclustered | gi|2631252187|gb|CP139487.1| | 28202 | g37454 | i0 | 94.215 | 286.497942386831 | 242 | 14 | 99 | 0 | 2 | 243 | 513541 | 513300 | Peredibacter starrii strain A3.12 chromosome, complete genome | blastn | 69619 | 370 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 23426928 | 23426928 | PRJNA493828_P_NODE_16419_length_308_cov_3.889362_g16000_i0 | PRJNA493828 | 16419 | 308 | 3.889362 | 11.97923496 | Bdellovibrio bacteriovorus | 959 | Bacteria | Bacteria | 453 | 6.75e-123 | NTclustered | gi|2800920897|gb|CP168968.1| | 959 | g16000 | i0 | 95.423 | 91.6720779220779 | 284 | 13 | 92 | 0 | 25 | 308 | 779032 | 779315 | Bdellovibrio bacteriovorus strain Bd5 chromosome, complete genome | blastn | 28235 | 453 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;