RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA493827" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 5 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA493827 · 5 ✖

analysis 1

  • blastn · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8126513 8126513 PRJNA493827_P_NODE_61047_length_449_cov_20.928191_g58850_i0 PRJNA493827 61047 449 20.928191 93.96757759 Piptocephalis corymbifera 78917 Fungi Fungi 71.3 1.2e-7   NTclustered gi|311235601|ref|NG_027616.1| 78917 g58850 i0 88.333 0.476614699331849 60 6 13 1 53 111 3175 3234 Piptocephalis corymbifera NRRL 2385 28S rRNA gene, partial sequence; from reference material blastn 214 71.3 1 Eukaryota Opisthokonta Fungi Zoopagomycota Zoopagomycetes Zoopagales Piptocephalidaceae Piptocephalis Piptocephalis corymbifera
8758246 8758246 PRJNA493827_P_NODE_203307_length_247_cov_0.885057_g201109_i0 PRJNA493827 203307 247 0.885057 2.18609079 Fungi 4751 Fungi Fungi 226 1.2399999999999997e-54   NTclustered gi|2324017300|ref|XM_051533035.1| 61397 g201109 i0 84.188 26.0971659919028 234 35 94 2 13 245 748 980 Kickxella alabastrina transitional endoplasmic reticulum ATPase (BX661DRAFT_144198), partial mRNA blastn 6446 226 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Kickxella Kickxella alabastrina
12583526 12583526 PRJNA493827_P_NODE_120170_length_312_cov_0.861925_g117972_i0 PRJNA493827 120170 312 0.861925 2.689206 Fungi 4751 Fungi Fungi 111 4.74e-20   NTclustered gi|2028315740|ref|XM_040886760.1| 61395 g117972 i0 82.171 28.0416666666667 129 23 41 0 173 301 780 652 Linderina pennispora cytochrome Bc1 complex with Stigmatellin (DL89DRAFT_265650), mRNA blastn 8749 111 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora
14498948 14498948 PRJNA493827_P_NODE_133032_length_296_cov_1.381166_g130834_i0 PRJNA493827 133032 296 1.381166 4.08825136 Linderina pennispora 61395 Fungi Fungi 287 6.92e-73   NTclustered gi|2028315762|ref|XM_040886762.1| 61395 g130834 i0 86.77 17.6959459459459 257 34 87 0 40 296 948 692 Linderina pennispora ubiquitin-domain-containing protein (DL89DRAFT_265656), partial mRNA blastn 5238 287 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora
20871441 20871441 PRJNA493827_P_NODE_109677_length_326_cov_3.683794_g107479_i0 PRJNA493827 109677 326 3.683794 12.00916844 Kickxella alabastrina 61397 Fungi Fungi 95.3 5.02e-15   NTclustered gi|2324017890|ref|XM_051536612.1| 61397 g107479 i0 93.651 4.01533742331288 63 4 19 0 10 72 1174 1236 Kickxella alabastrina ribosomal protein L3-domain-containing protein (BX661DRAFT_184853), mRNA blastn 1309 95.3 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Kickxella Kickxella alabastrina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;