contig_metadata
11 rows where analysis = "blastn", bioproject = "PRJNA493827" and tax_phylum = "Thermodesulfobacteriota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 470687 | 470687 | PRJNA493827_P_NODE_151501_length_278_cov_1.502439_g149303_i0 | PRJNA493827 | 151501 | 278 | 1.502439 | 4.17678042 | Syntrophales bacterium | 2928017 | Bacteria | Bacteria | 139 | 1.91e-28 | NTclustered | gi|2621703594|emb|OY761459.1| | 2928017 | g149303 | i0 | 82.716 | 160.931654676259 | 162 | 22 | 57 | 6 | 53 | 210 | 1397960 | 1398119 | MAG: Syntrophales bacterium isolate c6a0f7f3-880d-44d6-9c5f-266f97196533 genome assembly, chromosome: 1 | blastn | 44739 | 139 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Syntrophia | Syntrophales | Syntrophales bacterium | ||||
| 470829 | 470829 | PRJNA493827_P_NODE_158221_length_272_cov_1.859296_g156023_i0 | PRJNA493827 | 158221 | 272 | 1.859296 | 5.05728512 | Smithellaceae bacterium | 2964540 | Bacteria | Bacteria | 285 | 2.26e-72 | NTclustered | gi|2626216295|emb|OY821638.1| | 2964540 | g156023 | i0 | 85.821 | 0.985294117647059 | 268 | 38 | 99 | 0 | 5 | 272 | 4802039 | 4801772 | MAG: Smithellaceae bacterium isolate 7d888188-1d27-4603-a379-950c855845c6 genome assembly, chromosome: 1 | blastn | 268 | 285 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Syntrophia | Syntrophales | Smithellaceae | Smithellaceae bacterium | |||
| 6208358 | 6208358 | PRJNA493827_P_NODE_159085_length_271_cov_5.151515_g156887_i0 | PRJNA493827 | 159085 | 271 | 5.151515 | 13.96060565 | Desulfonema | 45654 | Bacteria | Bacteria | 265 | 2.93e-66 | NTclustered | gi|2007135636|gb|CP061800.1| | 45655 | g156887 | i0 | 88.341 | 136.09594095941 | 223 | 23 | 82 | 3 | 39 | 259 | 7419141 | 7419362 | Desulfonema magnum strain 4be13 chromosome, complete genome | blastn | 36882 | 265 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfococcaceae | Desulfonema | Desulfonema magnum | ||
| 6208710 | 6208710 | PRJNA493827_P_NODE_209765_length_246_cov_0.890173_g207567_i0 | PRJNA493827 | 209765 | 246 | 0.890173 | 2.18982558 | Geobacter | 28231 | Bacteria | Bacteria | 182 | 2.72e-41 | NTclustered | gi|779731694|gb|CP010430.1| | 35554 | g207567 | i0 | 81.982 | 132.524390243902 | 222 | 33 | 88 | 5 | 30 | 246 | 1229621 | 1229840 | Geobacter sulfurreducens strain AM-1 genome | blastn | 32601 | 182 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Geobacterales | Geobacteraceae | Geobacter | Geobacter sulfurreducens | ||
| 6851871 | 6851871 | PRJNA493827_P_NODE_92566_length_356_cov_3.201413_g90368_i0 | PRJNA493827 | 92566 | 356 | 3.201413 | 11.39703028 | uncultured Desulfobulbus sp. | 239745 | Bacteria | Bacteria | 58.4 | 7.24e-4 | NTclustered | gi|2621704320|emb|OY760916.1| | 239745 | g90368 | i0 | 100 | 0.775280898876405 | 31 | 0 | 9 | 0 | 326 | 356 | 4608661 | 4608691 | MAG: uncultured Desulfobulbus sp. isolate 7a05128d-adad-4d17-beb6-ff3d102eb21b genome assembly, chromosome: 1 | blastn | 276 | 58.4 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobulbia | Desulfobulbales | Desulfobulbaceae | Desulfobulbus | uncultured Desulfobulbus sp. | ||
| 8758105 | 8758105 | PRJNA493827_P_NODE_181547_length_253_cov_1.227778_g179349_i0 | PRJNA493827 | 181547 | 253 | 1.227778 | 3.10627834 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 237 | 5.899999999999999e-58 | NTclustered | gi|470477521|ref|NR_076389.1| | 28232 | g179349 | i0 | 83.984 | 192.845849802372 | 256 | 31 | 100 | 9 | 1 | 253 | 276 | 28 | Geobacter metallireducens strain GS-15 23S ribosomal RNA gene, complete sequence | blastn | 48790 | 239 | 0.99163179916318 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Geobacterales | Geobacteraceae | Geobacter | Geobacter metallireducens | ||
| 10673451 | 10673451 | PRJNA493827_P_NODE_113889_length_320_cov_1.894737_g111691_i0 | PRJNA493827 | 113889 | 320 | 1.894737 | 6.0631584 | Candidatus Desulfofervidus auxilii | 1621989 | Bacteria | Bacteria | 52.8 | 0.03 | NTclustered | gi|1001906061|gb|CP013015.1| | 1621989 | g111691 | i0 | 100 | 0.0875 | 28 | 0 | 9 | 0 | 111 | 138 | 267126 | 267153 | Candidatus Desulfofervidus auxilii strain HS1 genome | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Candidatus Desulfofervidia | Candidatus Desulfofervidales | Candidatus Desulfofervidaceae | Candidatus Desulfofervidus | Candidatus Desulfofervidus auxilii | ||
| 17049018 | 17049018 | PRJNA493827_P_NODE_204114_length_247_cov_0.885057_g201916_i0 | PRJNA493827 | 204114 | 247 | 0.885057 | 2.18609079 | Syntrophobacter fumaroxidans | 119484 | Bacteria | Bacteria | 63.9 | 1.03e-5 | NTclustered | gi|116696516|gb|CP000478.1| | 335543 | g201916 | i0 | 91.489 | 13.3684210526316 | 47 | 3 | 19 | 1 | 139 | 185 | 4546388 | 4546343 | Syntrophobacter fumaroxidans MPOB, complete genome | blastn | 3302 | 63.9 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Syntrophobacteria | Syntrophobacterales | Syntrophobacteraceae | Syntrophobacter | Syntrophobacter fumaroxidans | ||
| 19599299 | 19599299 | PRJNA493827_P_NODE_57796_length_464_cov_1.578005_g55601_i0 | PRJNA493827 | 57796 | 464 | 1.578005 | 7.3219432 | Pseudodesulfovibrio portus | 231439 | Bacteria | Bacteria | 65.8 | 5.79e-6 | NTclustered | gi|2296712847|dbj|AP026708.1| | 231439 | g55601 | i0 | 97.368 | 2.15948275862069 | 38 | 1 | 8 | 0 | 96 | 133 | 3040293 | 3040256 | Pseudodesulfovibrio portus JCM 14722 DNA, complete genome | blastn | 1002 | 65.8 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Pseudodesulfovibrio | Pseudodesulfovibrio portus | ||
| 20872722 | 20872722 | PRJNA493827_P_NODE_167177_length_265_cov_1.078125_g164979_i0 | PRJNA493827 | 167177 | 265 | 1.078125 | 2.85703125 | Smithellaceae bacterium | 2964540 | Bacteria | Bacteria | 95.3 | 3.97e-15 | NTclustered | gi|2626214512|emb|OY820932.1| | 2964540 | g164979 | i0 | 86.207 | 20.1622641509434 | 87 | 12 | 33 | 0 | 161 | 247 | 611422 | 611508 | MAG: Smithellaceae bacterium isolate 90efb5c7-b315-4df1-98b9-9b59cc098579 genome assembly, chromosome: 1 | blastn | 5343 | 95.3 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Syntrophia | Syntrophales | Smithellaceae | Smithellaceae bacterium | |||
| 22148205 | 22148205 | PRJNA493827_P_NODE_202198_length_247_cov_1.327586_g200000_i0 | PRJNA493827 | 202198 | 247 | 1.327586 | 3.27913742 | uncultured Desulforhopalus sp. | 218291 | Bacteria | Bacteria | 261 | 3.41e-65 | NTclustered | gi|2621785518|emb|OY781976.1| | 218291 | g200000 | i0 | 85.887 | 240.825910931174 | 248 | 31 | 99 | 3 | 3 | 247 | 5452488 | 5452242 | MAG: uncultured Desulforhopalus sp. isolate bb11d97f-aff7-40c5-8ccb-5babbf234ee9 genome assembly, chromosome: 1 | blastn | 59484 | 261 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobulbia | Desulfobulbales | Desulfocapsaceae | Desulforhopalus | uncultured Desulforhopalus sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;