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contig_metadata

16 rows where analysis = "blastn", bioproject = "PRJNA493827" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 16 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA493827 · 16 ✖

analysis 1

  • blastn · 16 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3023018 3023018 PRJNA493827_P_NODE_225083_length_243_cov_0.905882_g222885_i0 PRJNA493827 225083 243 0.905882 2.20129326 Schmidtea mediterranea 79327 Platyhelminthes Platyhelminthes 440 4e-119   NTclustered gi|109631072|gb|DQ665992.1| 79327 g222885 i0 99.585 98.5679012345679 241 1 99 0 1 241 30 270 Schmidtea mediterranea 28S ribosomal RNA gene, partial sequence blastn 23952 440 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Tricladida Dugesiidae Schmidtea Schmidtea mediterranea
3023490 3023490 PRJNA493827_P_NODE_30543_length_677_cov_5.352649_g28469_i0 PRJNA493827 30543 677 5.352649 36.23743373 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 56.5 0.005   NTclustered gi|690462028|emb|LN002547.1| 99802 g28469 i0 97.059 0.0502215657311669 34 0 5 1 233 266 7550 7582 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_scaffold0002527 blastn 34 56.5 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
4297303 4297303 PRJNA493827_P_NODE_144504_length_284_cov_2.691943_g142306_i0 PRJNA493827 144504 284 2.691943 7.64511812 Arthurdendyus triangulatus 132421 Platyhelminthes Platyhelminthes 427 3.7299999999999998e-115   NTclustered gi|2620230845|gb|OR797296.1| 132421 g142306 i0 94.014 80.1478873239437 284 14 99 1 1 281 3676 3959 Arthurdendyus triangulatus small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 22762 427 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Tricladida Geoplanidae Arthurdendyus Arthurdendyus triangulatus
5576818 5576818 PRJNA493827_P_NODE_53265_length_487_cov_0.980676_g51074_i0 PRJNA493827 53265 487 0.980676 4.77589212 Schistosoma mansoni 6183 Platyhelminthes Platyhelminthes 54.7 0.013   NTclustered gi|1084292313|ref|XM_018794893.1| 6183 g51074 i0 100 0.0595482546201232 29 0 6 0 285 313 258 286 Schistosoma mansoni hypothetical protein partial mRNA blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma mansoni
6850158 6850158 PRJNA493827_P_NODE_27786_length_716_cov_2.395023_g25791_i0 PRJNA493827 27786 716 2.395023 17.14836468 Dugesia japonica 6161 Platyhelminthes Platyhelminthes 1157 0   NTclustered gi|298501368|gb|HM149269.1| 6161 g25791 i0 95.822 101.064245810056 718 27 100 3 1 716 896 180 Dugesia japonica strain Pek-1 28S ribosomal RNA gene, partial sequence blastn 72362 1157 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Tricladida Dugesiidae Dugesia Dugesia japonica
8124973 8124973 PRJNA493827_P_NODE_213267_length_245_cov_0.895349_g211069_i0 PRJNA493827 213267 245 0.895349 2.19360505 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 58.4 4.75e-4   NTclustered gi|690483814|emb|LN027075.1| 99802 g211069 i0 97.059 0.277551020408163 34 1 14 0 155 188 4445 4412 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_scaffold0026572 blastn 68 58.4 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
8126413 8126413 PRJNA493827_P_NODE_56787_length_469_cov_0.959596_g54594_i0 PRJNA493827 56787 469 0.959596 4.50050524 Dicrocoelium dendriticum 57078 Platyhelminthes Platyhelminthes 52.8 0.046   NTclustered gi|687572767|emb|LK586392.1| 57078 g54594 i0 100 0.0597014925373134 28 0 6 0 270 297 337 310 Dicrocoelium dendriticum genome assembly D_dendriticum_Leon_v1_0_4, scaffold DDEL_scaffold0178600 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Dicrocoeliidae Dicrocoelium Dicrocoelium dendriticum
8127185 8127185 PRJNA493827_P_NODE_87287_length_367_cov_11.309524_g85089_i0 PRJNA493827 87287 367 11.309524 41.50595308 Clonorchis sinensis 79923 Platyhelminthes Platyhelminthes 106 2.64e-18   NTclustered gi|325459339|gb|HM020387.1| 79923 g85089 i0 77.596 9.74386920980927 183 35 50 5 42 224 376 200 Clonorchis sinensis secretory eggshell protein precursor (SEP18.7) mRNA, complete cds blastn 3576 106 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Opisthorchiida Opisthorchiidae Clonorchis Clonorchis sinensis
8759016 8759016 PRJNA493827_P_NODE_75887_length_397_cov_1.339506_g73689_i0 PRJNA493827 75887 397 1.339506 5.31783882 Metazoa 33208 Platyhelminthes Platyhelminthes 56.5 0.003   NTclustered gi|1084298175|ref|XM_018797110.1| 6183 g73689 i0 100 2.04030226700252 30 0 8 0 6 35 1313 1284 Schistosoma mansoni putative nucleolysin tia-1 partial mRNA blastn 810 56.5 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma mansoni
10673208 10673208 PRJNA493827_P_NODE_103209_length_337_cov_1.219697_g101011_i0 PRJNA493827 103209 337 1.219697 4.11037889 Dugesia japonica 6161 Platyhelminthes Platyhelminthes 623 5.369999999999999e-174   NTclustered gi|298501370|gb|HM149271.1| 6161 g101011 i0 100 100.676557863501 337 0 100 0 1 337 530 194 Dugesia japonica strain Pek-1 18S ribosomal RNA gene, partial sequence blastn 33928 623 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Tricladida Dugesiidae Dugesia Dugesia japonica
10677624 10677624 PRJNA493827_P_NODE_83089_length_377_cov_3.993421_g80891_i0 PRJNA493827 83089 377 3.993421 15.05519717 Marionfyfea adventor 3040208 Platyhelminthes Platyhelminthes 562 1.34e-155   NTclustered gi|2893358306|gb|PV014941.1| 3040208 g80891 i0 93.684 25.0291777188329 380 16 100 5 1 377 746 1120 Marionfyfea adventor isolate MarionAdv_2022-07 large subunit ribosomal RNA gene, partial sequence blastn 9436 562 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Tricladida Geoplanidae Marionfyfea Marionfyfea adventor
15776713 15776713 PRJNA493827_P_NODE_86453_length_369_cov_2.858108_g84255_i0 PRJNA493827 86453 369 2.858108 10.54641852 Dugesia japonica 6161 Platyhelminthes Platyhelminthes 534 2.859999999999999e-147   NTclustered gi|393794548|dbj|AK388972.1| 6161 g84255 i0 92.935 43.9430894308943 368 24 99 2 1 367 986 620 Dugesia japonica cDNA, clone: Dj_aH_000_05659HH.full, full-insert sequence, expressed in adult head blastn 16215 534 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Tricladida Dugesiidae Dugesia Dugesia japonica
17047347 17047347 PRJNA493827_P_NODE_125194_length_305_cov_2.405172_g122996_i0 PRJNA493827 125194 305 2.405172 7.3357746 Dugesia japonica 6161 Platyhelminthes Platyhelminthes 553 6.39e-153   NTclustered gi|336044477|gb|JF827607.1| 6161 g122996 i0 99.346 57.8950819672131 306 1 100 1 1 305 404 709 Dugesia japonica isolate DjSH 28S ribosomal RNA gene, partial sequence blastn 17658 553 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Tricladida Dugesiidae Dugesia Dugesia japonica
19599167 19599167 PRJNA493827_P_NODE_52736_length_489_cov_2.355769_g50545_i0 PRJNA493827 52736 489 2.355769 11.51971041 Schistosoma haematobium 6185 Platyhelminthes Platyhelminthes 54.7 0.013   NTclustered gi|2318767389|ref|XM_035729481.2| 6185 g50545 i0 100 0.18200408997955 29 0 6 0 82 110 7006 7034 Schistosoma haematobium uncharacterized protein (MS3_00005828), mRNA blastn 89 54.7 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma haematobium
22781725 22781725 PRJNA493827_P_NODE_110238_length_326_cov_1.000000_g108040_i0 PRJNA493827 110238 326 1 3.26 Metazoa 33208 Platyhelminthes Platyhelminthes 405 2.04e-108   NTclustered gi|60687563|gb|AY914894.1| 6182 g108040 i0 99.55 97.8527607361963 222 1 98 0 105 326 321 542 Schistosoma japonicum unknown mRNA blastn 31900 405 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
23424256 23424256 PRJNA493827_P_NODE_209139_length_246_cov_0.890173_g206941_i0 PRJNA493827 209139 246 0.890173 2.18982558 Echinococcus granulosus 6210 Platyhelminthes Platyhelminthes 455 1.4500000000000002e-123   NTclustered gi|638920685|gb|KJ559023.1| 6210 g206941 i0 100 100 246 0 100 0 1 246 9027 9272 Echinococcus granulosus mitochondrion, complete genome blastn 24600 455 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Taeniidae Echinococcus Echinococcus granulosus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;