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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA493827" and tax_phylum = "Hemichordata"

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tax_superkingdom 1

tax_phylum 1

  • Hemichordata · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA493827 · 6 ✖

analysis 1

  • blastn · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3022358 3022358 PRJNA493827_P_NODE_193343_length_249_cov_1.056818_g191145_i0 PRJNA493827 193343 249 1.056818 2.63147682 Saccoglossus kowalevskii 10224 Hemichordata other_Eukaryota 76.8 1.34e-9   NTclustered gi|585648419|ref|XM_002732897.2| 10224 g191145 i0 94 0.200803212851406 50 3 20 0 62 111 239 288 PREDICTED: Saccoglossus kowalevskii 116 kDa U5 small nuclear ribonucleoprotein component-like (LOC100378261), mRNA blastn 50 76.8 1 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Harrimaniidae Saccoglossus Saccoglossus kowalevskii
6850606 6850606 PRJNA493827_P_NODE_43746_length_547_cov_1.822785_g41560_i0 PRJNA493827 43746 547 1.822785 9.97063395 Saccoglossus kowalevskii 10224 Hemichordata other_Eukaryota 65.8 6.91e-6   NTclustered gi|585650273|ref|XM_006814484.1| 10224 g41560 i0 95.122 0.0749542961608775 41 2 7 0 180 220 2557 2597 PREDICTED: Saccoglossus kowalevskii multidrug resistance protein 2-like (LOC100368266), mRNA blastn 41 65.8 1 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Harrimaniidae Saccoglossus Saccoglossus kowalevskii
10675094 10675094 PRJNA493827_P_NODE_187869_length_250_cov_1.807910_g185671_i0 PRJNA493827 187869 250 1.80791 4.519775 Saccoglossus kowalevskii 10224 Hemichordata other_Eukaryota 84.2 8.03e-12   NTclustered gi|585691881|ref|XM_006821267.1| 10224 g185671 i0 76.871 3.68 147 34 59 0 65 211 7132 7278 PREDICTED: Saccoglossus kowalevskii serine/threonine-protein kinase SMG1-like (LOC102809421), mRNA blastn 920 84.2 1 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Harrimaniidae Saccoglossus Saccoglossus kowalevskii
17050284 17050284 PRJNA493827_P_NODE_44094_length_544_cov_5.127389_g41907_i0 PRJNA493827 44094 544 5.127389 27.89299616 Saccoglossus kowalevskii 10224 Hemichordata other_Eukaryota 65.8 6.87e-6   NTclustered gi|585643258|ref|XM_002730519.2| 10224 g41907 i0 90 0.275735294117647 50 5 9 0 385 434 524 573 PREDICTED: Saccoglossus kowalevskii 14-3-3-like protein 2-like (LOC100373095), transcript variant X1, mRNA blastn 150 65.8 1 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Harrimaniidae Saccoglossus Saccoglossus kowalevskii
22147741 22147741 PRJNA493827_P_NODE_180098_length_254_cov_1.309392_g177900_i0 PRJNA493827 180098 254 1.309392 3.32585568 Ptychodera flava 63121 Hemichordata other_Eukaryota 248 2.74e-61   NTclustered gi|2875677321|ref|XM_070723428.1| 63121 g177900 i0 85.366 100.188976377953 246 28 95 8 13 254 608 367 PREDICTED: Ptychodera flava actin, non-muscle 6.2 (LOC139150945), transcript variant X1, mRNA blastn 25448 248 1 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Ptychoderidae Ptychodera Ptychodera flava
23424393 23424393 PRJNA493827_P_NODE_21559_length_834_cov_2.768725_g19746_i0 PRJNA493827 21559 834 2.768725 23.0911665 Ptychodera flava 63121 Hemichordata other_Eukaryota 78.7 1.38e-9   NTclustered gi|2875709116|ref|XM_070685159.1| 63121 g19746 i0 92.727 0.065947242206235 55 3 6 1 109 162 3298 3244 PREDICTED: Ptychodera flava protein FAM184A-like (LOC139120641), mRNA blastn 55 78.7 1 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Ptychoderidae Ptychodera Ptychodera flava

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;