contig_metadata
13 rows where analysis = "blastn", bioproject = "PRJNA493827" and tax_phylum = "Gemmatimonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 471643 | 471643 | PRJNA493827_P_NODE_197001_length_248_cov_2.182857_g194803_i0 | PRJNA493827 | 197001 | 248 | 2.182857 | 5.41348536 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 126 | 1.2999999999999998e-24 | NTclustered | gi|2874253755|emb|OY969695.1| | 412054 | g194803 | i0 | 96.104 | 26.4193548387097 | 77 | 3 | 31 | 0 | 172 | 248 | 155536 | 155460 | MAG: uncultured Gemmatimonadales bacterium isolate MFD04967.bin.1.34 genome assembly, chromosome: 1 | blastn | 6552 | 126 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 4299135 | 4299135 | PRJNA493827_P_NODE_232904_length_241_cov_0.916667_g230706_i0 | PRJNA493827 | 232904 | 241 | 0.916667 | 2.20916747 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 396 | 8.7e-106 | NTclustered | gi|2874253938|emb|OY970263.1| | 412054 | g230706 | i0 | 96.311 | 89.8630705394191 | 244 | 4 | 100 | 4 | 1 | 241 | 801389 | 801630 | MAG: uncultured Gemmatimonadales bacterium isolate MFD02416.bin.2.26 genome assembly, chromosome: 1 | blastn | 21657 | 396 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 6849383 | 6849383 | PRJNA493827_P_NODE_207966_length_246_cov_0.890173_g205768_i0 | PRJNA493827 | 207966 | 246 | 0.890173 | 2.18982558 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 239 | 1.59e-58 | NTclustered | gi|2874253755|emb|OY969695.1| | 412054 | g205768 | i0 | 84.211 | 47.8536585365854 | 247 | 37 | 100 | 2 | 1 | 246 | 161719 | 161964 | MAG: uncultured Gemmatimonadales bacterium isolate MFD04967.bin.1.34 genome assembly, chromosome: 1 | blastn | 11772 | 239 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 6849790 | 6849790 | PRJNA493827_P_NODE_227386_length_242_cov_0.911243_g225188_i0 | PRJNA493827 | 227386 | 242 | 0.911243 | 2.20520806 | Gemmatimonas aurantiaca | 173480 | Bacteria | Bacteria | 448 | 2.3799999999999995e-121 | NTclustered | gi|226088597|dbj|AP009153.1| | 379066 | g225188 | i0 | 100 | 1 | 242 | 0 | 100 | 0 | 1 | 242 | 3923489 | 3923730 | Gemmatimonas aurantiaca T-27 DNA, complete genome | blastn | 242 | 448 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonas | Gemmatimonas aurantiaca | |
| 6851894 | 6851894 | PRJNA493827_P_NODE_93566_length_355_cov_0.804965_g91368_i0 | PRJNA493827 | 93566 | 355 | 0.804965 | 2.85762575 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 171 | 8.89e-38 | NTclustered | gi|2874253755|emb|OY969695.1| | 412054 | g91368 | i0 | 76.638 | 11.9295774647887 | 351 | 57 | 99 | 12 | 6 | 355 | 156855 | 157181 | MAG: uncultured Gemmatimonadales bacterium isolate MFD04967.bin.1.34 genome assembly, chromosome: 1 | blastn | 4235 | 171 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 8123079 | 8123079 | PRJNA493827_P_NODE_124967_length_306_cov_1.008584_g122769_i0 | PRJNA493827 | 124967 | 306 | 1.008584 | 3.08626704 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 357 | 5.4e-94 | NTclustered | gi|2874253978|emb|OY970303.1| | 412054 | g122769 | i0 | 90.545 | 89.2843137254902 | 275 | 19 | 89 | 7 | 1 | 271 | 1904724 | 1904453 | MAG: uncultured Gemmatimonadales bacterium isolate MFD01275.bin.c.12 genome assembly, chromosome: 1 | blastn | 27321 | 357 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 8123275 | 8123275 | PRJNA493827_P_NODE_133987_length_295_cov_1.387387_g131789_i0 | PRJNA493827 | 133987 | 295 | 1.387387 | 4.09279165 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 405 | 1.82e-108 | NTclustered | gi|2874253938|emb|OY970263.1| | 412054 | g131789 | i0 | 91.304 | 75.4237288135593 | 299 | 22 | 100 | 4 | 1 | 295 | 801159 | 801457 | MAG: uncultured Gemmatimonadales bacterium isolate MFD02416.bin.2.26 genome assembly, chromosome: 1 | blastn | 22250 | 405 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 8123785 | 8123785 | PRJNA493827_P_NODE_157227_length_273_cov_1.540000_g155029_i0 | PRJNA493827 | 157227 | 273 | 1.54 | 4.2042 | Gemmatimonas groenlandica | 2732249 | Bacteria | Bacteria | 248 | 2.98e-61 | NTclustered | gi|1839994010|gb|CP053085.1| | 2732249 | g155029 | i0 | 89 | 34.2307692307692 | 200 | 22 | 73 | 0 | 42 | 241 | 3685207 | 3685008 | Gemmatimonas groenlandica strain TET16 chromosome, complete genome | blastn | 9345 | 248 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonas | Gemmatimonas groenlandica | |
| 8125375 | 8125375 | PRJNA493827_P_NODE_232467_length_241_cov_0.916667_g230269_i0 | PRJNA493827 | 232467 | 241 | 0.916667 | 2.20916747 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 335 | 1.9199999999999993e-87 | NTclustered | gi|2874253728|emb|OY969570.1| | 412054 | g230269 | i0 | 91.77 | 52.4107883817427 | 243 | 16 | 100 | 4 | 1 | 241 | 172936 | 172696 | MAG: uncultured Gemmatimonadales bacterium isolate MFD02840.bin.c.1 genome assembly, chromosome: 1 | blastn | 12631 | 335 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 9398402 | 9398402 | PRJNA493827_P_NODE_138768_length_290_cov_1.142857_g136570_i0 | PRJNA493827 | 138768 | 290 | 1.142857 | 3.3142853 | Gemmatimonas groenlandica | 2732249 | Bacteria | Bacteria | 425 | 1.37e-114 | NTclustered | gi|1839994010|gb|CP053085.1| | 2732249 | g136570 | i0 | 93.151 | 662.534482758621 | 292 | 17 | 100 | 3 | 1 | 290 | 1103058 | 1103348 | Gemmatimonas groenlandica strain TET16 chromosome, complete genome | blastn | 192135 | 425 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonas | Gemmatimonas groenlandica | |
| 9399443 | 9399443 | PRJNA493827_P_NODE_188028_length_250_cov_1.740113_g185830_i0 | PRJNA493827 | 188028 | 250 | 1.740113 | 4.3502825 | Gemmatimonas groenlandica | 2732249 | Bacteria | Bacteria | 326 | 1.21e-84 | NTclustered | gi|1839994010|gb|CP053085.1| | 2732249 | g185830 | i0 | 90.323 | 172.16 | 248 | 24 | 99 | 0 | 3 | 250 | 1104161 | 1104408 | Gemmatimonas groenlandica strain TET16 chromosome, complete genome | blastn | 43040 | 326 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonas | Gemmatimonas groenlandica | |
| 11308932 | 11308932 | PRJNA493827_P_NODE_48949_length_511_cov_2.413242_g46759_i0 | PRJNA493827 | 48949 | 511 | 2.413242 | 12.33166662 | Gemmatimonas | 173479 | Bacteria | Bacteria | 715 | 0 | NTclustered | gi|470475286|ref|NR_076270.1| | 173480 | g46759 | i0 | 91.977 | 57.3737769080235 | 511 | 39 | 99 | 2 | 2 | 511 | 530 | 21 | Gemmatimonas aurantiaca strain T-27 23S ribosomal RNA gene, complete sequence | blastn | 29318 | 721 | 0.991678224687933 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonas | Gemmatimonas aurantiaca | |
| 23423037 | 23423037 | PRJNA493827_P_NODE_151859_length_278_cov_1.243902_g149661_i0 | PRJNA493827 | 151859 | 278 | 1.243902 | 3.45804756 | Pseudogemmatithrix spongiicola | 3062599 | Bacteria | Bacteria | 396 | 1.03e-105 | NTclustered | gi|2557479348|gb|CP130613.1| | 3062599 | g149661 | i0 | 92.701 | 257.158273381295 | 274 | 20 | 99 | 0 | 1 | 274 | 1552747 | 1553020 | Pseudogemmatithrix spongiicola strain 318 chromosome, complete genome | blastn | 71490 | 396 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Pseudogemmatithrix | Pseudogemmatithrix spongiicola |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;