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contig_metadata

10 rows where analysis = "blastn", bioproject = "PRJNA493827" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 10 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA493827 · 10 ✖

analysis 1

  • blastn · 10 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
474376 474376 PRJNA493827_P_NODE_96701_length_348_cov_5.690909_g94503_i0 PRJNA493827 96701 348 5.690909 19.80436332 Lytechinus variegatus 7654 Echinodermata other_Eukaryota 73.1 2.53e-8   NTclustered gi|61807498|gb|AY955836.1| 7654 g94503 i0 93.878 3.84770114942529 49 2 14 1 53 100 94 142 Lytechinus variegatus vesicle-associated membrane protein (VAMP) mRNA, complete cds blastn 1339 73.1 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus variegatus
1105445 1105445 PRJNA493827_P_NODE_240121_length_198_cov_8.608000_g237922_i0 PRJNA493827 240121 198 8.608 17.04384 Metazoa 33208 Echinodermata other_Eukaryota 58.4 3.69e-4   NTclustered gi|1944899333|ref|XR_005271915.1| 46514 g237922 i0 100 15.7525252525253 31 0 16 0 2 32 15 45 PREDICTED: Patiria miniata U2 spliceosomal RNA (LOC119733575), ncRNA blastn 3119 58.4 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Asterinidae Patiria Patiria miniata
4297118 4297118 PRJNA493827_P_NODE_135384_length_293_cov_2.377273_g133186_i0 PRJNA493827 135384 293 2.377273 6.96540989 Diadema antillarum 105358 Echinodermata other_Eukaryota 209 1.52e-49   NTclustered gi|2919373928|ref|XM_071624062.1| 105358 g133186 i0 82.906 83.778156996587 234 38 80 2 46 278 404 172 PREDICTED: Diadema antillarum dynein light chain 2, cytoplasmic (LOC139712222), mRNA blastn 24547 209 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum
10675009 10675009 PRJNA493827_P_NODE_183969_length_251_cov_1.297753_g181771_i0 PRJNA493827 183969 251 1.297753 3.25736003 Holothuria sanctori 491806 Echinodermata other_Eukaryota 436 5.369999999999999e-118   NTclustered gi|1059433196|dbj|LC177083.1| 491806 g181771 i0 98.008 20.0796812749004 251 5 100 0 1 251 352 602 Holothuria sanctori mitochondrial gene for 28S ribosomal RNA, partial sequence, isolate: Hsa-16S7 blastn 5040 436 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Holothuriidae Holothuria Holothuria sanctori
10676041 10676041 PRJNA493827_P_NODE_235329_length_240_cov_4.263473_g233130_i0 PRJNA493827 235329 240 4.263473 10.2323352 Anneissia japonica 1529436 Echinodermata other_Eukaryota 65.8 2.77e-6   NTclustered gi|1826668382|ref|XM_033265908.1| 1529436 g233130 i0 91.667 0.2 48 2 20 2 186 232 576 622 PREDICTED: Anneissia japonica probable acyl-CoA dehydrogenase 6 (LOC117120826), mRNA blastn 48 65.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Crinoidea Comatulida Comatulidae Anneissia Anneissia japonica
10677224 10677224 PRJNA493827_P_NODE_66829_length_426_cov_1.762040_g64632_i0 PRJNA493827 66829 426 1.76204 7.5062904 Lytechinus variegatus 7654 Echinodermata other_Eukaryota 62.1 6.82e-5   NTclustered gi|2037962375|ref|XM_041626674.1| 7654 g64632 i0 87.037 0.126760563380282 54 7 13 0 185 238 230 283 PREDICTED: Lytechinus variegatus ras-related GTP-binding protein A (LOC121429578), mRNA blastn 54 62.1 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus variegatus
11950535 11950535 PRJNA493827_P_NODE_209630_length_246_cov_0.890173_g207432_i0 PRJNA493827 209630 246 0.890173 2.18982558 Anneissia japonica 1529436 Echinodermata other_Eukaryota 121 6.01e-23   NTclustered gi|1826632189|ref|XM_033248804.1| 1529436 g207432 i0 82.192 3.01626016260163 146 20 58 4 52 194 625 483 PREDICTED: Anneissia japonica 60S ribosomal protein L9-like (LOC117107195), mRNA blastn 742 121 1 Eukaryota Opisthokonta Metazoa Echinodermata Crinoidea Comatulida Comatulidae Anneissia Anneissia japonica
15772093 15772093 PRJNA493827_P_NODE_10093_length_1316_cov_2.617860_g8835_i0 PRJNA493827 10093 1316 2.61786 34.4510376 Strongylocentrotus purpuratus 7668 Echinodermata other_Eukaryota 54.7 0.037   NTclustered gi|1752396619|ref|XM_031000234.1| 7668 g8835 i0 88.889 0.0341945288753799 45 4 3 1 29 72 1703 1747 PREDICTED: Strongylocentrotus purpuratus mesencephalic astrocyte-derived neurotrophic factor homolog (LOC755636), mRNA blastn 45 54.7 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
24057401 24057401 PRJNA493827_P_NODE_238379_length_228_cov_2.793548_g236180_i0 PRJNA493827 238379 228 2.793548 6.36928944 Lytechinus 7652 Echinodermata other_Eukaryota 54.7 0.006   NTclustered gi|2707358952|ref|XM_054895213.2| 7653 g236180 i0 94.286 0.307017543859649 35 2 15 0 145 179 1315 1349 PREDICTED: Lytechinus pictus long-chain specific acyl-CoA dehydrogenase, mitochondrial-like (LOC129256978), mRNA blastn 70 54.7 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus pictus
24697775 24697775 PRJNA493827_P_NODE_206680_length_246_cov_1.491329_g204482_i0 PRJNA493827 206680 246 1.491329 3.66866934 Patiria miniata 46514 Echinodermata other_Eukaryota 215 2.68e-51   NTclustered gi|46909232|gb|AY580175.1| 46514 g204482 i0 82.52 94.9349593495935 246 41 99 2 1 245 924 1168 Asterina miniata ATP synthase beta subunit mRNA, partial cds blastn 23354 215 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Asterinidae Patiria Patiria miniata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;