RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA493827" and tax_phylum = "Candidatus Nomuraibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Nomuraibacteriota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA493827 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1748329 1748329 PRJNA493827_P_NODE_60222_length_453_cov_1.897368_g58026_i0 PRJNA493827 60222 453 1.897368 8.59507704 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 244 6.75e-60   NTclustered gi|1958028780|gb|CP064973.1| 2052152 g58026 i0 77.434 40.6401766004415 452 75 95 18 1 430 126713 127159 MAG: Candidatus Nomurabacteria bacterium isolate EsbW_18-Q3-R4-48_MAXAC.200_cln chromosome, complete genome blastn 18410 244 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
17049398 17049398 PRJNA493827_P_NODE_223474_length_243_cov_0.905882_g221276_i0 PRJNA493827 223474 243 0.905882 2.20129326 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 217 7.34e-52   NTclustered gi|1958028780|gb|CP064973.1| 2052152 g221276 i0 84.416 129.888888888889 231 24 92 10 17 239 126630 126404 MAG: Candidatus Nomurabacteria bacterium isolate EsbW_18-Q3-R4-48_MAXAC.200_cln chromosome, complete genome blastn 31563 217 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;