RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA493827" and tax_phylum = "Candidatus Altimarinota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Altimarinota · 6 ✖

tax_clade 1

bioproject 1

  • PRJNA493827 · 6 ✖

analysis 1

  • blastn · 6 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13224965 13224965 PRJNA493827_P_NODE_178231_length_255_cov_2.472527_g176033_i0 PRJNA493827 178231 255 2.472527 6.30494385 Candidatus Gracilibacteria bacterium HOT-871 1540872 Bacteria Bacteria 145 3.7199999999999995e-30   NTclustered gi|1275383184|gb|CP017714.1| 1540872 g176033 i0 81.215 0.709803921568627 181 32 71 2 73 252 50187 50008 Candidatus Gracilibacteria bacterium HOT-871, complete genome blastn 181 145 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Gracilibacteria bacterium HOT-871
13225375 13225375 PRJNA493827_P_NODE_197071_length_248_cov_1.828571_g194873_i0 PRJNA493827 197071 248 1.828571 4.53485608 Candidatus Gracilibacteria bacterium 28_42_T64 1862133 Bacteria Bacteria 329 9.249999999999998e-86   NTclustered gi|1769783243|gb|CP042461.1| 1862133 g194873 i0 91.667 116.306451612903 240 17 96 3 11 248 1249223 1249461 Candidatus Gracilibacteria bacterium 28_42_T64 chromosome, complete genome blastn 28844 329 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Gracilibacteria bacterium 28_42_T64
13227450 13227450 PRJNA493827_P_NODE_67871_length_423_cov_0.745714_g65674_i0 PRJNA493827 67871 423 0.745714 3.15437022 Candidatus Gracilibacteria bacterium 28_42_T64 1862133 Bacteria Bacteria 167 1.39e-36   NTclustered gi|1769783243|gb|CP042461.1| 1862133 g65674 i0 86.364 0.364066193853428 154 19 36 2 265 418 30681 30832 Candidatus Gracilibacteria bacterium 28_42_T64 chromosome, complete genome blastn 154 167 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Gracilibacteria bacterium 28_42_T64
20871318 20871318 PRJNA493827_P_NODE_104397_length_335_cov_1.175573_g102199_i0 PRJNA493827 104397 335 1.175573 3.93816955 Candidatus Gracilibacteria bacterium 28_42_T64 1862133 Bacteria Bacteria 233 1.0499999999999998e-56   NTclustered gi|1769783243|gb|CP042461.1| 1862133 g102199 i0 82.27 0.841791044776119 282 38 83 10 1 277 89599 89325 Candidatus Gracilibacteria bacterium 28_42_T64 chromosome, complete genome blastn 282 233 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Gracilibacteria bacterium 28_42_T64
24699761 24699761 PRJNA493827_P_NODE_74160_length_402_cov_1.574468_g71962_i0 PRJNA493827 74160 402 1.574468 6.32936136 Candidatus Gracilibacteria bacterium HOT-871 1540872 Bacteria Bacteria 198 4.679999999999999e-46   NTclustered gi|1275383184|gb|CP017714.1| 1540872 g71962 i0 76.341 2.6592039800995 410 74 99 20 7 402 855397 855797 Candidatus Gracilibacteria bacterium HOT-871, complete genome blastn 1069 198 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Gracilibacteria bacterium HOT-871
24700236 24700236 PRJNA493827_P_NODE_94380_length_353_cov_1.389286_g92182_i0 PRJNA493827 94380 353 1.389286 4.90417958 Candidatus Gracilibacteria bacterium 28_42_T64 1862133 Bacteria Bacteria 198 4.05e-46   NTclustered gi|1769783243|gb|CP042461.1| 1862133 g92182 i0 77.374 1.01416430594901 358 65 98 11 3 349 118140 118492 Candidatus Gracilibacteria bacterium 28_42_T64 chromosome, complete genome blastn 358 198 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Gracilibacteria bacterium 28_42_T64

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;